HTSDiff: Differential Analysis of RNA-Seq Data with Poisson Mixture Models

This package implements a Poisson mixture model to identify differentially expressed genes from RNA-seq data.

Version: 1.0.5
Depends: R (≥ 2.10.0), plotrix, HTSCluster (≥ 2.0.4)
Imports: edgeR, poisson.glm.mix
Published: 2014-10-29
Author: Andrea Rau, Marie-Laure Martin-Magniette, Cathy Maugis-Rabusseau
Maintainer: Andrea Rau <andrea.rau at jouy.inra.fr>
License: GPL (≥ 3)
NeedsCompilation: no
Citation: HTSDiff citation info
Materials: NEWS
CRAN checks: HTSDiff results

Downloads:

Reference manual: HTSDiff.pdf
Vignettes: Differential expression analysis of RNA-seq data with the "HTSDiff" package
Package source: HTSDiff_1.0.5.tar.gz
Windows binaries: r-devel: HTSDiff_1.0.5.zip, r-release: HTSDiff_1.0.5.zip, r-oldrel: HTSDiff_1.0.2.zip
OS X Snow Leopard binaries: r-release: HTSDiff_1.0.2.tgz, r-oldrel: HTSDiff_1.0.2.tgz
OS X Mavericks binaries: r-release: HTSDiff_1.0.2.tgz
Old sources: HTSDiff archive