IDSL.UFA: United Formula Annotation (UFA) for HRMS Data Processing

A pipeline to annotate peaklists from the IDSL.IPA package with molecular formula using an isotopic profile matching approach. The IDSL.UFA pipeline is especially beneficial when MS/MS data channels are not available. The IDSL.UFA package has functions to process user-defined adduct formulas.

Version: 1.2
Depends: R (≥ 4.0)
Imports: IDSL.MXP (≥ 1.2), xml2, RNetCDF, base64enc, IDSL.IPA (≥ 1.5), stats, grid, readxl, parallel, doParallel, foreach, GA, ggplot2, gridExtra
Published: 2022-05-18
Author: Sadjad Fakouri-Baygi ORCID iD [cre, aut], Dinesh Barupal ORCID iD [aut]
Maintainer: Sadjad Fakouri-Baygi <sadjad.fakouri-baygi at mssm.edu>
BugReports: https://github.com/idslme/idsl.ufa/issues
License: MIT + file LICENSE
URL: https://ufa.idsl.me, https://github.com/idslme/idsl.ufa
NeedsCompilation: no
CRAN checks: IDSL.UFA results

Documentation:

Reference manual: IDSL.UFA.pdf

Downloads:

Package source: IDSL.UFA_1.2.tar.gz
Windows binaries: r-devel: IDSL.UFA_1.2.zip, r-release: IDSL.UFA_1.2.zip, r-oldrel: IDSL.UFA_1.2.zip
macOS binaries: r-release (arm64): IDSL.UFA_1.2.tgz, r-oldrel (arm64): IDSL.UFA_1.2.tgz, r-release (x86_64): IDSL.UFA_1.2.tgz, r-oldrel (x86_64): IDSL.UFA_1.2.tgz
Old sources: IDSL.UFA archive

Reverse dependencies:

Reverse imports: IDSL.UFAx

Linking:

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