MDimNormn: Multi-Dimensional MA Normalization for Plate Effect

Normalize data to minimize the difference between sample plates (batch effects). For given data in a matrix and grouping variable (or plate), the function 'normn_MA' normalizes the data on MA coordinates. More details are in the citation. The primary method is 'Multi-MA'. Other fitting functions on MA coordinates can also be employed e.g. loess.

Version: 0.8.0
Depends: R (≥ 3.2.0)
Published: 2015-08-12
Author: Mun-Gwan Hong
Maintainer: Mun-Gwan Hong <mun-gwan.hong at scilifelab.se>
License: GPL-3
NeedsCompilation: no
Citation: MDimNormn citation info
CRAN checks: MDimNormn results

Downloads:

Reference manual: MDimNormn.pdf
Package source: MDimNormn_0.8.0.tar.gz
Windows binaries: r-devel: MDimNormn_0.8.0.zip, r-release: MDimNormn_0.8.0.zip, r-oldrel: MDimNormn_0.8.0.zip
OS X El Capitan binaries: r-release: MDimNormn_0.8.0.tgz
OS X Mavericks binaries: r-oldrel: MDimNormn_0.8.0.tgz

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