MSeasy: Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS) data

Package for the detection of molecules in complex mixtures of compounds. It creates an initial_DATA matrix from several GC-MS analyses by collecting and assembling the information from chromatograms and mass spectra (\emph{MS.DataCreation}).It tests for the best unsupervised clustering method to group similar mass spectra into molecules (\emph{MS.test.clust}).It runs the optimal unsupervised clustering method on the initial_DATA matrix, identifies the optimal number of clusters, produces different files for facilitating the quality control and identification of putative molecules, and returns fingerprinting or profiling matrices (\emph{MS.clust}).It converts output files from \emph{MS.clust} for NIST mass spectral library search and ARISTO webtool search

Version: 5.3
Depends: amap, clValid, cluster, fpc
Suggests: xcms, tcltk
Published: 2012-05-04
Author: Elodie Courtois, Yann Guitton, Florence Nicole
Maintainer: <yann.guitton at gmail.com>
License: GPL-2
URL: http://sites.google.com/site/rpackagemseasy/
CRAN checks: MSeasy results

Downloads:

Package source: MSeasy_5.3.tar.gz
MacOS X binary: MSeasy_5.3.tgz
Windows binary: MSeasy_5.3.zip
Reference manual: MSeasy.pdf
Old sources: MSeasy archive

Reverse dependencies:

Reverse depends: MSeasyTkGUI