NGCHM: Next Generation Clustered Heat Maps

Next-Generation Clustered Heat Maps (NG-CHMs) allow for dynamic exploration of heat map data in a web browser. 'NGCHM' allows users to create both stand-alone HTML files containing a Next-Generation Clustered Heat Map, and .ngchm files to view in the NG-CHM viewer. See Ryan MC, Stucky M, et al (2020) <doi:10.12688/f1000research.20590.2> for more details.

Version: 1.0.3
Depends: R (≥ 3.4.0)
Imports: digest, grDevices, htmltools, httr, jsonlite, logger (≥ 0.2.0), methods, stats, tsvio, utils
Suggests: knitr, rmarkdown, Rtsne, testthat, umap, uwot
Enhances: NGCHMDemoData, NGCHMSupportFiles
Published: 2024-05-08
Author: Bradley M Broom ORCID iD [aut], Mary A Rohrdanz [ctb, cre], Chris Wakefield [ctb], James Melott [ctb], MD Anderson Cancer Center [cph]
Maintainer: Mary A Rohrdanz <marohrdanz at>
License: GPL-3
NeedsCompilation: no
SystemRequirements: Java (>= 11) Git
Materials: README
CRAN checks: NGCHM results


Reference manual: NGCHM.pdf


Package source: NGCHM_1.0.3.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): NGCHM_1.0.3.tgz, r-oldrel (arm64): NGCHM_1.0.3.tgz, r-release (x86_64): NGCHM_1.0.3.tgz, r-oldrel (x86_64): NGCHM_1.0.3.tgz
Old sources: NGCHM archive


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