NMF: Algorithms and framework for Nonnegative Matrix Factorization (NMF)

This package provides a framework to perform Non-negative Matrix Factorization (NMF). It implements a set of already published algorithms and seeding methods, and provides a framework to test, develop and plug new/custom algorithms. Most of the built-in algorithms have been optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines.

Version: 0.20.5
Depends: R (≥ 3.0.0), methods, utils, pkgmaker (≥ 0.20), registry, rngtools (≥ 1.2.3), cluster
Imports: graphics, stats, stringr, digest, grid, grDevices, gridBase, colorspace, RColorBrewer, foreach, doParallel, ggplot2, reshape2
Suggests: RcppOctave (≥ 0.11), fastICA, doMPI, bigmemory (≥ 4.2), synchronicity, corpcor, xtable, devtools, knitr, bibtex, RUnit, mail, Biobase
Published: 2014-03-18
Author: Renaud Gaujoux, Cathal Seoighe
Maintainer: Renaud Gaujoux <renaud at tx.technion.ac.il>
BugReports: http://github.com/renozao/NMF/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://renozao.github.io/NMF
NeedsCompilation: yes
Citation: NMF citation info
Materials: README NEWS
CRAN checks: NMF results

Downloads:

Reference manual: NMF.pdf
Vignettes: NMF-unitTests
An introduction to the package NMF
NMF: generating heatmaps
Package source: NMF_0.20.5.tar.gz
OS X binary: NMF_0.20.5.tgz
Windows binary: NMF_0.20.5.zip
Old sources: NMF archive