| NEWS | R Documentation |
export dat_write, add append option, doc tweaks
structure cleanup
remove ggplot2 dependency (removed 'ggplot' option from plot.admb.hist) [to reduce dependency creep in glmmADMB]
allow for negative-phase in read_par
major changes to modularity: exposed compile_admb, run_admb, read_admb
changes to clean_admb
improved logic for retrieving profile and MCMC parameter names in read_admb; run_admb writes .mcinfo file to disk
write_dat complains if class is not matrix or factor
exposed confint.admb
read_pars reads full std matrix (attempt at back-compatibility) [and fixed bug]
fixed bug: std err/estimate names mismatch
exposed and documented read_pars, write_pin, write_dat
improved warning handling
took out testing for spurious xxalloc error messages
added ignore_admb_errors
uncertain: more accessors, general cleanup
Support for MCMC
Support for profiling
Support for random effects
Expanded vignette
Initial release. Basic stuff works on my system, lightly tested elsewhere.