Rcell: Microscopy Based Cytometry Data Analysis Package

Package to analyze microscopy based cytometry datasets created with Cell-ID, Cell-X or CellProfiler datasets. It includes functions for manipulating and plotting the data. It can also create automatic image montages of cells in a user defined layout.

Version: 1.2-6
Depends: R (≥ 2.15.0), proto, plyr (≥ 1.8), reshape, ggplot2 (≥ 0.9.3), EBImage (≥ 4.0.0)
Imports: stats, digest, grid
Suggests: Hmisc, hopach, chron, R.matlab, splancs
Published: 2013-10-17
Author: Alan Bush
Maintainer: Alan Bush <abush at fbmc.fcen.uba.ar>
License: GPL-2
URL: http://www.embnet.qb.fcen.uba.ar, http://sourceforge.net/projects/cell-id
NeedsCompilation: no
Materials: README NEWS
CRAN checks: Rcell results

Downloads:

Reference manual: Rcell.pdf
Vignettes: Cell-ID-variables
Getting-Started-with-Rcell
Display-cell-images
Plotting-with-Rcell
Transform-dataset
Package source: Rcell_1.2-6.tar.gz
OS X binary: Rcell_1.2-6.tgz
Windows binary: Rcell_1.2-6.zip
Old sources: Rcell archive