SDDE: Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome Similarity Networks

Compares the evolution of an original network X to an augmented network Y by counting the number of Shortcuts, Detours, Dead Ends (SDDE), equal paths and disconnected nodes.

Version: 1.0.1
Depends: R (≥ 3.0), igraph (≥ 1.0.0), doParallel, foreach, iterators, parallel
Published: 2015-08-26
Author: Etienne Lord, Margaux Le Cam, Eric Bapteste, Vladimir Makarenkov and Francois-Joseph Lapointe
Maintainer: Etienne Lord <m.etienne.lord at gmail.com>
License: GPL-3
NeedsCompilation: yes
Materials: NEWS
CRAN checks: SDDE results

Downloads:

Reference manual: SDDE.pdf
Package source: SDDE_1.0.1.tar.gz
Windows binaries: r-devel: SDDE_1.0.1.zip, r-release: SDDE_1.0.1.zip, r-oldrel: SDDE_1.0.1.zip
OS X Mavericks binaries: r-release: SDDE_1.0.1.tgz, r-oldrel: SDDE_1.0.1.tgz
Old sources: SDDE archive

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