SDMtune: Species Distribution Model Selection

User-friendly framework that enables the training and the evaluation of species distribution models (SDMs). The package implements functions for data driven variable selection and model tuning and includes numerous utilities to display the results. All the functions used to select variables or to tune model hyperparameters have an interactive real-time chart displayed in the 'RStudio' viewer pane during their execution.

Version: 0.2.0
Depends: R (≥ 3.2.0)
Imports: cli (≥ 1.1.0), crayon (≥ 1.3.4), dismo (≥ 1.1-4), gbm (≥ 2.1.5), ggplot2 (≥ 3.2.0), htmltools (≥ 0.3.6), jsonlite (≥ 1.6), kableExtra (≥ 1.1.0), maxnet (≥ 0.1.2), methods, nnet (≥ 7.3-12), plotROC (≥ 2.2.1), progress (≥ 1.2.2), randomForest (≥ 4.6-14), raster (≥ 2.9-5), rasterVis (≥ 0.45), Rcpp (≥ 1.0.1), reshape2 (≥ 1.4.3), rstudioapi (≥ 0.10), scales (≥ 1.0.0), stringr (≥ 1.4.0), whisker (≥ 0.3-2)
LinkingTo: Rcpp
Suggests: covr, knitr (≥ 1.23), maps (≥ 3.3.0), pkgdown (≥ 1.3.0), rgdal (≥ 1.4-4), rmarkdown (≥ 1.13), roxygen2 (≥ 6.1.1), snow (≥ 0.4-3), spelling, testthat (≥ 2.2.1), zeallot (≥ 0.1.0)
Published: 2019-09-02
Author: Sergio Vignali ORCID iD [aut, cre], Arnaud Barras ORCID iD [aut], Veronika Braunisch ORCID iD [aut], Conservation Biology - University of Bern [fnd]
Maintainer: Sergio Vignali <sergio.vignali at iee.unibe.ch>
BugReports: https://github.com/ConsBiol-unibern/SDMtune/issues
License: GPL-3
URL: https://consbiol-unibern.github.io/SDMtune/
NeedsCompilation: yes
Language: en-US
Citation: SDMtune citation info
Materials: NEWS
CRAN checks: SDMtune results

Downloads:

Reference manual: SDMtune.pdf
Vignettes: SDMtune
Package source: SDMtune_0.2.0.tar.gz
Windows binaries: r-devel: SDMtune_0.2.0.zip, r-release: SDMtune_0.2.0.zip, r-oldrel: SDMtune_0.2.0.zip
OS X binaries: r-release: SDMtune_0.2.0.tgz, r-oldrel: SDMtune_0.2.0.tgz
Old sources: SDMtune archive

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