SPIAssay: A Genetic-Based Assay for the Identification of Cell Lines

The SNP Panel Identification Assay (SPIA) is a package that enables an accurate determination of cell line identity from the genotype of single nucleotide polymorphisms (SNPs). The SPIA test allows to discern when two cell lines are close enough to be called similar and when they are not. Details about the method are available at "Demichelis et al. (2008) SNP panel identification assay (SPIA): a genetic-based assay for the identification of cell lines. Nucleic Acids Res., 3, 2446-2456".

Version: 1.1.0
Depends: R (≥ 1.8.0)
Published: 2016-08-19
Author: Francesca Demichelis, Davide Prandi
Maintainer: Davide Prandi <davide.prandi at unitn.it>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://www.r-project.org
NeedsCompilation: no
CRAN checks: SPIAssay results

Downloads:

Reference manual: SPIAssay.pdf
Package source: SPIAssay_1.1.0.tar.gz
Windows binaries: r-devel: SPIAssay_1.1.0.zip, r-release: SPIAssay_1.1.0.zip, r-oldrel: SPIAssay_1.1.0.zip
OS X El Capitan binaries: r-release: SPIAssay_1.1.0.tgz
OS X Mavericks binaries: r-oldrel: SPIAssay_1.1.0.tgz
Old sources: SPIAssay archive

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