TRAMPR: 'TRFLP' Analysis and Matching Package for R

Matching terminal restriction fragment length polymorphism ('TRFLP') profiles between unknown samples and a database of known samples. TRAMPR facilitates analysis of many unknown profiles at once, and provides tools for working directly with electrophoresis output through to generating summaries suitable for community analyses with R's rich set of statistical functions. TRAMPR also resolves the issues of multiple 'TRFLP' profiles within a species, and shared 'TRFLP' profiles across species.

Version: 1.0-8
Depends: R (≥ 2.4)
Published: 2016-06-09
Author: Rich FitzJohn & Ian Dickie
Maintainer: Rich FitzJohn <rich.fitzjohn at gmail.com>
License: GPL-2
NeedsCompilation: no
Citation: TRAMPR citation info
Materials: ChangeLog
CRAN checks: TRAMPR results

Downloads:

Reference manual: TRAMPR.pdf
Vignettes: Introduction to TRAMPR
Package source: TRAMPR_1.0-8.tar.gz
Windows binaries: r-devel: TRAMPR_1.0-8.zip, r-release: TRAMPR_1.0-8.zip, r-oldrel: TRAMPR_1.0-8.zip
OS X El Capitan binaries: r-release: TRAMPR_1.0-8.tgz
OS X Mavericks binaries: r-oldrel: TRAMPR_1.0-8.tgz
Old sources: TRAMPR archive

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