TRAMPR: TRFLP Analysis and Matching Package for R

TRAMPR is an R package for matching terminal restriction fragment length polymorphism (TRFLP) profiles between unknown samples and a database of knowns. TRAMPR facilitates analysis of many unknown profiles at once, and provides tools for working directly with electrophoresis output through to generating summaries suitable for community analyses with R's rich set of statistical functions. TRAMPR also resolves the issues of multiple TRFLP profiles within a species, and shared TRFLP profiles across species.

Version: 1.0-7
Depends: R (≥ 2.4)
Published: 2012-03-23
Author: Rich FitzJohn & Ian Dickie
Maintainer: Rich FitzJohn <rich.fitzjohn at gmail.com>
License: GPL-2
Citation: TRAMPR citation info
CRAN checks: TRAMPR results

Downloads:

Package source: TRAMPR_1.0-7.tar.gz
MacOS X binary: TRAMPR_1.0-7.tgz
Windows binary: TRAMPR_1.0-7.zip
Reference manual: TRAMPR.pdf
Vignettes: Introduction to TRAMPR
News/ChangeLog:ChangeLog
Old sources: TRAMPR archive