VDAP: Peptide Array Analysis Tools

Analyze Peptide Array Data and characterize peptide sequence space. Allows for high level visualization of global signal, Quality control based on replicate correlation and/or relative Kd, calculation of peptide Length/Charge/Kd parameters, Hits selection based on RFU Signal, and amino acid composition/basic motif recognition with RFU signal weighting. Basic signal trends can be used to generate peptides that follow the observed compositional trends.

Version: 2.0.0
Imports: stringr, drc, ggplot2, reshape2
Published: 2016-05-22
Author: Cody Moore
Maintainer: Cody Moore <Jumper9400 at gmail.com>
License: GPL-2
NeedsCompilation: no
CRAN checks: VDAP results

Downloads:

Reference manual: VDAP.pdf
Package source: VDAP_2.0.0.tar.gz
Windows binaries: r-devel: VDAP_2.0.0.zip, r-release: VDAP_2.0.0.zip, r-oldrel: VDAP_2.0.0.zip
OS X El Capitan binaries: r-release: VDAP_2.0.0.tgz
OS X Mavericks binaries: r-oldrel: VDAP_2.0.0.tgz

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