Classes and functions for genetic data analysis within the multivariate framework.
| Version: | 1.3-9 |
| Depends: | R (≥ 2.14), ade4 |
| Imports: | methods, MASS, igraph, ape |
| Suggests: | genetics, spdep, tripack, pegas, seqinr, adehabitat, parallel, akima, maps, splancs, hierfstat |
| Published: | 2013-06-04 |
| Author: | Thibaut Jombart, Ismail Ahmed, Federico Calboli, Anne Cori, Tobias Erik Reiners, Peter Solymos |
| Maintainer: | Thibaut Jombart <t.jombart at imperial.ac.uk> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| Citation: | adegenet citation info |
| In views: | Genetics |
| CRAN checks: | adegenet results |
| Package source: | adegenet_1.3-9.tar.gz |
| MacOS X binary: | adegenet_1.3-9.tgz |
| Windows binary: | adegenet_1.3-9.zip |
| Reference manual: | adegenet.pdf |
| Vignettes: |
An introduction to the adegenet package An introduction to Discriminant Analysis of Principal Components (DAPC) Analysing genome-wide SNP data using adegenet A tutorial for spatial Analysis of Principal Components |
| News/ChangeLog: | ChangeLog |
| Old sources: | adegenet archive |
| Reverse depends: | adephylo, coalescentMCMC, epibase, mmod, pegas, PopGenReport, poppr, StAMPP |
| Reverse imports: | outbreaker, poppr |
| Reverse suggests: | hierfstat, polysat |