alphabetr: Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells

Provides algorithms for frequency-based pairing of alpha-beta T cell receptors.

Version: 0.2.2
Imports: Rcpp (≥ 0.12.3), clue (≥ 0.3-50), dplyr (≥ 0.4.3), multicool (≥ 0.1-9)
LinkingTo: Rcpp
Suggests: knitr, rmarkdown
Published: 2017-01-28
Author: Edward Lee [aut, cre]
Maintainer: Edward Lee <email.edwardlee at gmail.com>
BugReports: http://github.com/edwardslee/alphabetr
License: AGPL (≥ 3)
URL: http://github.com/edwardslee/alphabetr
NeedsCompilation: yes
CRAN checks: alphabetr results

Downloads:

Reference manual: alphabetr.pdf
Vignettes: Using \textsc{alphabetr} to determine $\alpha\beta$TCR pairs
Package source: alphabetr_0.2.2.tar.gz
Windows binaries: r-devel: alphabetr_0.2.2.zip, r-release: alphabetr_0.2.2.zip, r-oldrel: alphabetr_0.2.2.zip
OS X El Capitan binaries: r-release: alphabetr_0.2.2.tgz
OS X Mavericks binaries: r-oldrel: alphabetr_0.2.2.tgz

Linking:

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