Available CRAN Packages By Date of Publication

Date Package Title
2015-08-28 ALTopt Optimal Experimental Designs for Accelerated Life Testing
2015-08-28 Anthropometry Statistical Methods for Anthropometric Data
2015-08-28 apaTables Create American Psychological Association (APA) Style Tables
2015-08-28 cacIRT Classification Accuracy and Consistency under Item Response Theory
2015-08-28 CMplot Circle Manhattan Plot
2015-08-28 detector Detect Data Containing Personally Identifiable Information
2015-08-28 erboost Nonparametric Multiple Expectile Regression via ER-Boost
2015-08-28 extRemes Extreme Value Analysis
2015-08-28 geesmv Modified Variance Estimators for Generalized Estimating Equations
2015-08-28 GsymPoint Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests
2015-08-28 hdnom Nomograms for High-Dimensional Cox Models
2015-08-28 KERE Expectile Regression in Reproducing Kernel Hilbert Space
2015-08-28 kerndwd Distance Weighted Discrimination (DWD) and Kernel Methods
2015-08-28 kin.cohort Analysis of Kin-Cohort Studies
2015-08-28 lookupTable Look-Up Tables using S4
2015-08-28 mpt Multinomial Processing Tree Models
2015-08-28 OriGen Fast Spatial Ancestry via Flexible Allele Frequency Surfaces
2015-08-28 tmvtnorm Truncated Multivariate Normal and Student t Distribution
2015-08-28 trimr An Implementation of Common Response Time Trimming Methods
2015-08-28 umx Helper Functions for Structural Equation Modelling in OpenMx
2015-08-28 wec Weighted Effect Coding
2015-08-27 artfima Fit ARTFIMA Model
2015-08-27 cate High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation
2015-08-27 CensMixReg Modeling Censored Data Using Mixture Regression
2015-08-27 cgdsr R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)
2015-08-27 choroplethr Simplify the Creation of Choropleth Maps in R
2015-08-27 edgar Platform for EDGAR Filling Management
2015-08-27 FCNN4R Fast Compressed Neural Networks for R
2015-08-27 iaQCA The Irvine Robustness Assessment for Qualitative Comparative Analysis
2015-08-27 InformationValue Performance Analysis and Companion Functions for Accuracy Improvement for Binary Classification Problems
2015-08-27 intervals Tools for Working with Points and Intervals
2015-08-27 lasvmR A Simple Wrapper for the LASVM Solver
2015-08-27 ldamatch Multivariate Condition Matching by Backwards Elimination Using Linear Discriminant Analysis
2015-08-27 mmod Modern Measures of Population Differentiation
2015-08-27 multic Quantitative Linkage Analysis Tools using the Variance Components Approach
2015-08-27 nhanesA NHANES Data Retrieval
2015-08-27 OptiQuantR Simplifies and Automates Analyzing and Reporting OptiQuant's log Data
2015-08-27 plfMA A GUI to View, Design and Export Various Graphs of Data
2015-08-27 sgPLS Sparse Group Partial Least Square Methods
2015-08-27 SimReg Similarity Regression Functions
2015-08-27 support.CEs Basic Functions for Supporting an Implementation of Choice Experiments
2015-08-27 systemfit Estimating Systems of Simultaneous Equations
2015-08-27 TAM Test Analysis Modules
2015-08-27 walkr Random Walks in the Intersection of Hyperplanes and the N-Simplex
2015-08-26 AF Model-Based Estimation of Confounder-Adjusted Attributable Fractions
2015-08-26 ArArRedux Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data
2015-08-26 CARBayesST Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
2015-08-26 ctmm Continuous-Time Movement Modeling
2015-08-26 DLMtool Data-Limited Methods Toolkit
2015-08-26 FastBandChol Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor
2015-08-26 gamlr Gamma Lasso Regression
2015-08-26 generator Generate Data Containing Fake Personally Identifiable Information
2015-08-26 GGMselect Gaussian Graphs Models Selection
2015-08-26 glmmLasso Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation
2015-08-26 googleVis R Interface to Google Charts
2015-08-26 gstat Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation
2015-08-26 hpoPlot Functions for Plotting HPO Terms
2015-08-26 imager Image Processing Library Based on CImg
2015-08-26 ioncopy Calling Copy Number Alterations in Amplicon Sequencing Data
2015-08-26 Langevin Langevin Analysis in One and Two Dimensions
2015-08-26 lcopula Liouville Copulas
2015-08-26 LightningR Tools for Communication with Lightning-Viz Server
2015-08-26 LINselect Selection of Linear Estimators
2015-08-26 mapmisc Utilities for Producing Maps
2015-08-26 MCDA Functions to Support the Multicriteria Decision Aiding Process
2015-08-26 mixor Mixed-Effects Ordinal Regression Analysis
2015-08-26 ms.sev Package for Calculation of ARMSS, Local MSSS and Global MSSS
2015-08-26 multiway Component Models for Multi-Way Data
2015-08-26 PowerTOST Power and Sample Size Based on Two One-Sided t-Tests (TOST) for (Bio)Equivalence Studies
2015-08-26 PReMiuM Dirichlet Process Bayesian Clustering, Profile Regression
2015-08-26 profileR Profile Analysis of Multivariate Data in R
2015-08-26 RcmdrPlugin.EZR R Commander Plug-in for the EZR (Easy R) Package
2015-08-26 REDCapR Interaction Between R and REDCap
2015-08-26 Rfit Rank Estimation for Linear Models
2015-08-26 robustreg Robust Regression Functions
2015-08-26 RSAGA SAGA Geoprocessing and Terrain Analysis in R
2015-08-26 rtkpp STK++ Integration to R using Rcpp
2015-08-26 SDDE Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome Similarity Networks
2015-08-26 sisVIVE Some Invalid Some Valid Instrumental Variables Estimator
2015-08-26 sjmisc Data Transformation and Labelled Data Utility Functions
2015-08-26 sjPlot Data Visualization for Statistics in Social Science
2015-08-26 SurvRank Rank Based Survival Modelling
2015-08-26 Wats Wrap Around Time Series Graphics
2015-08-26 weatherr Tools for Handling and Scrapping Instant Weather Forecast Feeds
2015-08-25 anonymizer Anonymize Data Containing Personally Identifiable Information
2015-08-25 bimixt Estimates Mixture Models for Case-Control Data
2015-08-25 clttools Central Limit Theorem Experiments (Theoretical and Simulation)
2015-08-25 compare Comparing Objects for Differences
2015-08-25 contoureR Contouring of Non-Regular Three-Dimensional Data
2015-08-25 curl A Modern and Flexible Web Client for R
2015-08-25 DescTools Tools for Descriptive Statistics
2015-08-25 fptdApprox Approximation of First-Passage-Time Densities for Diffusion Processes
2015-08-25 ggplot2movies Movies Data
2015-08-25 ica Independent Component Analysis
2015-08-25 idm Incremental Decomposition Methods
2015-08-25 lawn Client for 'Turfjs' for 'Geospatial' Analysis
2015-08-25 mcmcse Monte Carlo Standard Errors for MCMC
2015-08-25 meta4diag Meta-Analysis for Diagnostic Test Studies
2015-08-25 networkD3 D3 JavaScript Network Graphs from R
2015-08-25 ONETr Efficient Authenticated Interaction with the O*NET API
2015-08-25 optismixture Optimal Mixture Weights in Multiple Importance Sampling
2015-08-25 qtl Tools for Analyzing QTL Experiments
2015-08-25 rhandsontable Interface to the 'Handsontable.js' Library
2015-08-25 RMySQL Database Interface and 'MySQL' Driver for R
2015-08-25 RProtoBuf R Interface to the Protocol Buffers API
2015-08-25 SACOBRA Self-Adjusting COBRA
2015-08-25 SamplingStrata Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys
2015-08-25 scales Scale Functions for Visualization
2015-08-25 sn The Skew-Normal and Skew-t Distributions
2015-08-25 Surrogate Evaluation of Surrogate Endpoints in Clinical Trials
2015-08-24 cheddar Analysis and Visualisation of Ecological Communities
2015-08-24 MareyMap Estimation of Meiotic Recombination Rates Using Marey Maps
2015-08-24 markovchain Easy Handling Discrete Time Markov Chains
2015-08-24 mev Multivariate Extreme Value Distributions
2015-08-24 mvMORPH Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
2015-08-24 onewaytests One Way Independent Groups Design
2015-08-24 SemiParBIVProbit Semiparametric Bivariate Regression Models
2015-08-24 simcausal Simulating Longitudinal Data with Causal Inference Applications
2015-08-24 SSRMST Sample Size Calculation using Restricted Mean Survival Time
2015-08-24 V8 Embedded JavaScript Engine
2015-08-24 VBmix Variational Bayesian Mixture Models
2015-08-23 AutoModel Automated Hierarchical Multiple Regression with Assumptions Checking
2015-08-23 BDgraph Bayesian Graph Selection Based on Birth-Death MCMC Approach
2015-08-23 diveMove Dive Analysis and Calibration
2015-08-23 dtwclust Time Series Clustering with Dynamic Time Warping
2015-08-23 emplik Empirical Likelihood Ratio for Censored/Truncated Data
2015-08-23 GUIProfiler Graphical User Interface for Rprof()
2015-08-23 HH Statistical Analysis and Data Display: Heiberger and Holland
2015-08-23 qrcode QRcode Generator for R
2015-08-23 R2jags Using R to Run 'JAGS'
2015-08-23 RcppDE Global Optimization by Differential Evolution in C++
2015-08-23 rgrass7 Interface Between GRASS 7 Geographical Information System and R
2015-08-23 rPref Database Preferences and Skyline Computation
2015-08-23 SensMixed Analysis of Sensory and Consumer Data in a Mixed Model Framework
2015-08-23 seriation Infrastructure for Seriation
2015-08-23 snn Stabilized Nearest Neighbor Classifier
2015-08-23 SSN Spatial Modeling on Stream Networks
2015-08-23 stocc Fit a Spatial Occupancy Model via Gibbs Sampling
2015-08-23 wbsts Multiple Change-Point Detection for Nonstationary Time Series
2015-08-23 ZRA Dynamic Plots for Time Series Forecasting
2015-08-22 blmeco Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
2015-08-22 boral Bayesian Ordination and Regression AnaLysis
2015-08-22 CEoptim Cross-Entropy R Package for Optimization
2015-08-22 flowr Streamlining Design and Deployment of Complex Workflows
2015-08-22 gender Predict Gender from Names Using Historical Data
2015-08-22 ggsn North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap'
2015-08-22 lessR Less Code, More Results
2015-08-22 ltsa Linear Time Series Analysis
2015-08-22 MatrixModels Modelling with Sparse And Dense Matrices
2015-08-22 neotoma Access to the Neotoma Paleoecological Database Through R
2015-08-22 opefimor Option Pricing and Estimation of Financial Models in R
2015-08-22 params Simplify Parameters
2015-08-22 phonenumber Convert Letters to Numbers and Back as on a Telephone Keypad
2015-08-22 pls Partial Least Squares and Principal Component Regression
2015-08-22 PMCMR Calculate Pairwise Multiple Comparisons of Mean Rank Sums
2015-08-22 rgdal Bindings for the Geospatial Data Abstraction Library
2015-08-22 smcfcs Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification
2015-08-21 blocksdesign Nested Block Designs for Unstructured Treatments
2015-08-21 cplm Compound Poisson Linear Models
2015-08-21 DoE.base Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
2015-08-21 epifit Flexible Modelling Functions for Epidemiological Data Analysis
2015-08-21 ggmap Spatial Visualization with ggplot2
2015-08-21 ggparallel Variations of Parallel Coordinate Plots for Categorical Data
2015-08-21 gRbase A Package for Graphical Modelling in R
2015-08-21 ifs Iterated Function Systems
2015-08-21 longurl Expand Short URLs Using the 'LongURL' API
2015-08-21 MFAg Multiple Factor Analysis (MFA)
2015-08-21 MVar.pt Analise Multivariada (Brazilian Portuguese)
2015-08-21 mvmesh Multivariate Meshes and Histograms in Arbitrary Dimensions
2015-08-21 NNTbiomarker Calculate Design Parameters for Biomarker Validation Studies
2015-08-21 nopp Nash Optimal Party Positions
2015-08-21 ptw Parametric Time Warping
2015-08-21 QoLR Analysis of Health-Related Quality of Life in Oncology
2015-08-21 redist Markov Chain Monte Carlo Methods for Redistricting Simulation
2015-08-21 rpdo Pacific Decadal Oscillation Index
2015-08-21 rsggm Robust Sparse Gaussian Graphical Modeling via the Gamma-Divergence
2015-08-21 sde Simulation and Inference for Stochastic Differential Equations
2015-08-21 searchConsoleR Google Search Console APIv3 R Client
2015-08-21 selectiveInference Tools for Selective Inference
2015-08-21 statnetWeb A Graphical User Interface for Network Modeling with 'Statnet'
2015-08-21 stringdist Approximate String Matching and String Distance Functions
2015-08-21 tvm Time Value of Money Functions
2015-08-21 vdg Variance Dispersion Graphs and Fraction of Design Space Plots
2015-08-20 BlakerCI Blaker's Binomial Confidence Limits
2015-08-20 bootsPLS Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification
2015-08-20 boxr Interface for the 'Box.com API'
2015-08-20 CollocInfer Collocation Inference for Dynamic Systems
2015-08-20 CopyNumber450kCancer Baseline Correction for Copy Number Data from Cancer Samples
2015-08-20 crawl Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data
2015-08-20 eel Extended Empirical Likelihood
2015-08-20 evolqg Tools for Evolutionary Quantitative Genetics
2015-08-20 gamclass Functions and Data for a Course on Modern Regression and Classification
2015-08-20 GEVStableGarch ARMA-GARCH/APARCH Models with GEV and Stable Distributions
2015-08-20 graticule Meridional and Parallel Lines for Maps
2015-08-20 lme4 Linear Mixed-Effects Models using 'Eigen' and S4
2015-08-20 marked Mark-Recapture Analysis for Survival and Abundance Estimation
2015-08-20 mmpp Various Similarity and Distance Metrics for Marked Point Processes
2015-08-20 pomp Statistical Inference for Partially Observed Markov Processes
2015-08-20 qqtest Self Calibrating Quantile-Quantile Plots for Visual Testing
2015-08-20 ramify Additional Matrix Functionality
2015-08-20 RcmdrPlugin.temis Graphical Integrated Text Mining Solution
2015-08-20 SeqFeatR A Tool to Associate FASTA Sequences and Features
2015-08-20 simplr Basic Symbolic Expression Simplification
2015-08-20 spdynmod Spatio-Dynamic Wetland Plant Communities Model
2015-08-20 weirs A Hydraulics Package to Compute Open-Channel Flow over Weirs
2015-08-19 backShift Learning Causal Cyclic Graphs from Unknown Shift Interventions
2015-08-19 cem Coarsened Exact Matching
2015-08-19 circlize Circular Visualization in R
2015-08-19 commentr Print Nicely Formatted Comments for Use in Script Files
2015-08-19 DIFboost Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques
2015-08-19 distrom Distributed Multinomial Regression
2015-08-19 docopulae Optimal Designs for Copula Models
2015-08-19 foreign Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, Weka, dBase, ...
2015-08-19 gamboostLSS Boosting Methods for GAMLSS
2015-08-19 googleAuthR Easy Authentication with Google OAuth2 APIs
2015-08-19 Grace Graph-Constrained Estimation and Hypothesis Testing
2015-08-19 hexbin Hexagonal Binning Routines
2015-08-19 iqLearn Interactive Q-Learning
2015-08-19 labstatR Libreria Del Laboratorio Di Statistica Con R
2015-08-19 lfda Local Fisher Discriminant Analysis
2015-08-19 LifeTables Two-Parameter HMD Model Life Table System
2015-08-19 lulcc Land Use Change Modelling in R
2015-08-19 metagear Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis
2015-08-19 MetaSKAT Meta Analysis for SNP-Set (Sequence) Kernel Association Test
2015-08-19 MLDS Maximum Likelihood Difference Scaling
2015-08-19 nlme Linear and Nonlinear Mixed Effects Models
2015-08-19 pla Parallel Line Assays
2015-08-19 pwr Basic Functions for Power Analysis
2015-08-19 qualvar Implements Indices of Qualitative Variation Proposed by Wilcox (1973)
2015-08-19 R6 Classes with Reference Semantics
2015-08-19 rankdist Distance Based Ranking Models
2015-08-19 Rcmdr R Commander
2015-08-19 REGENT Risk Estimation for Genetic and Environmental Traits
2015-08-19 rstream Streams of Random Numbers
2015-08-19 Runuran R Interface to the UNU.RAN Random Variate Generators
2015-08-19 sensitivitymv Sensitivity Analysis in Observational Studies
2015-08-19 seqminer Efficiently Read Sequence Data (VCF Format, BCF Format and METAL Format) into R
2015-08-19 spsi Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation
2015-08-19 STI Calculation of the Standardized Temperature Index
2015-08-19 subscore Sub-Score Computing Functions in Classical Test Theory
2015-08-19 textir Inverse Regression for Text Analysis
2015-08-19 tmvnsim Truncated Multivariate Normal Simulation
2015-08-19 trajectories Classes and Methods for Trajectory Data
2015-08-18 abcrf Approximate Bayesian Computation via Random Forests
2015-08-18 AFLPsim Hybrid Simulation and Genome Scan for Dominant Markers
2015-08-18 dmm Dyadic Mixed Model for Pedigree Data
2015-08-18 fungible Fungible Coefficients and Monte Carlo Functions
2015-08-18 GlobalOptions Generate Functions to Get or Set Global Options
2015-08-18 ipw Estimate Inverse Probability Weights
2015-08-18 JGEE Joint Generalized Estimating Equation Solver
2015-08-18 kml K-Means for Longitudinal Data
2015-08-18 longitudinalData Longitudinal Data
2015-08-18 NlsyLinks Utilities and Kinship Information for Research with the NLSY
2015-08-18 phyndr Matches Tip and Trait Data
2015-08-18 polysat Tools for Polyploid Microsatellite Analysis
2015-08-18 quanteda Quantitative Analysis of Textual Data
2015-08-18 shapes Statistical Shape Analysis
2015-08-18 spTimer Spatio-Temporal Bayesian Modelling Using R
2015-08-18 SSDforR Functions to Analyze Single System Data
2015-08-18 stylo Functions for a Variety of Stylometric Analyses
2015-08-18 TSdist Distance Measures for Time Series Data
2015-08-17 addhazard Fit Additive Hazards Models for Survival Analysis
2015-08-17 afex Analysis of Factorial Experiments
2015-08-17 ASMap Linkage Map Construction using the MSTmap Algorithm
2015-08-17 Bchron Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
2015-08-17 BSSasymp Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates
2015-08-17 cp4p Calibration Plot for Proteomics
2015-08-17 fICA Classical, Reloaded and Adaptive FastICA Algorithms
2015-08-17 GeneralOaxaca Blinder-Oaxaca Decomposition for Generalized Linear Model
2015-08-17 geostatsp Geostatistical Modelling with Likelihood and Bayes
2015-08-17 hypergeo The Gauss Hypergeometric Function
2015-08-17 kml3d K-Means for Joint Longitudinal Data
2015-08-17 LotkasLaw Runs Lotka's Law which is One of the Special Applications of Zipf's Law
2015-08-17 mixedMem Tools for Discrete Multivariate Mixed Membership Models
2015-08-17 mp Multidimensional Projection Techniques
2015-08-17 multicool Permutations of Multisets in Cool-Lex Order
2015-08-17 RcppArmadillo 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library
2015-08-17 RcppShark R Interface to the Shark Machine Learning Library
2015-08-17 rwirelesscom Basic Wireless Communications
2015-08-17 simmr A Stable Isotope Mixing Model
2015-08-16 A3 Accurate, Adaptable, and Accessible Error Metrics for Predictive Models
2015-08-16 animation A Gallery of Animations in Statistics and Utilities to Create Animations
2015-08-16 coin Conditional Inference Procedures in a Permutation Test Framework
2015-08-16 filehash Simple Key-Value Database
2015-08-16 ipdw Spatial Interpolation by Inverse Path Distance Weighting
2015-08-16 mlsjunkgen Use the MLS Junk Generator Algorithm to Generate a Stream of Pseudo-Random Numbers
2015-08-16 party A Laboratory for Recursive Partytioning
2015-08-16 qdapRegex Regular Expression Removal, Extraction, and Replacement Tools
2015-08-16 quantreg Quantile Regression
2015-08-16 regexr Readable Regular Expressions
2015-08-16 rugarch Univariate GARCH Models
2015-08-15 archivist Tools for Storing, Restoring and Searching for R Objects
2015-08-15 AzureML Discover, Publish and Consume Web Services on Microsoft Azure Machine Learning
2015-08-15 betalink Beta-Diversity Within a Metaweb of Species Interactions
2015-08-15 cds Constrained Dual Scaling for Detecting Response Styles
2015-08-15 gelnet Generalized Elastic Nets
2015-08-15 lsbclust Least-Squares Bilinear Clustering for Three-Way Data
2015-08-15 raster Geographic Data Analysis and Modeling
2015-08-15 rfishbase R Interface to 'FishBase'
2015-08-15 RSiteCatalyst R Client for Adobe Analytics API V1.4
2015-08-15 sfsmisc Utilities from 'Seminar fuer Statistik' ETH Zurich
2015-08-15 SparseM Sparse Linear Algebra
2015-08-15 webchem Chemical Information from the Web
2015-08-15 zoib Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression
2015-08-14 ANOM Analysis of Means
2015-08-14 bootES Bootstrap Effect Sizes
2015-08-14 caRpools CRISPR AnalyzeR for Pooled CRISPR Screens
2015-08-14 dataRetrieval Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data
2015-08-14 dawai Discriminant Analysis with Additional Information
2015-08-14 diffIRT Diffusion IRT Models for Response and Response Time Data
2015-08-14 EGRETci Exploration and Graphics for RivEr Trends (EGRET) Confidence Intervals
2015-08-14 fpc Flexible Procedures for Clustering
2015-08-14 haplo.stats Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous
2015-08-14 InterSIM Simulation of Inter-Related Genomic Datasets
2015-08-14 JADE Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria
2015-08-14 kdecopula Kernel Smoothing for Bivariate Copula Densities
2015-08-14 knitr A General-Purpose Package for Dynamic Report Generation in R
2015-08-14 mboost Model-Based Boosting
2015-08-14 mcemGLM Maximum Likelihood Estimation for Generalized Linear Mixed Models
2015-08-14 partykit A Toolkit for Recursive Partytioning
2015-08-14 Rblpapi R Interface to BBG
2015-08-14 relsurv Relative Survival
2015-08-14 RJafroc Analysis of Data Acquired Using the Receiver Operating Characteristic Paradigm and Its Extensions
2015-08-14 seasonal R Interface to X-13-ARIMA-SEATS
2015-08-13 agricolae Statistical Procedures for Agricultural Research
2015-08-13 ART Aligned Rank Transform for Nonparametric Factorial Analysis
2015-08-13 backtestGraphics Interactive Graphics for Portfolio Data
2015-08-13 EGRET Exploration and Graphics for RivEr Trends (EGRET)
2015-08-13 evaluate Parsing and Evaluation Tools that Provide More Details than the Default
2015-08-13 forestFloor Visualizes Random Forests with Feature Contributions
2015-08-13 geospt Geostatistical Analysis and Design of Optimal Spatial Sampling Networks
2015-08-13 MfUSampler Multivariate-from-Univariate (MfU) MCMC Sampler
2015-08-13 PrevMap Geostatistical Modelling of Spatially Referenced Prevalence Data
2015-08-13 provenance Statistical Toolbox for Sedimentary Provenance Analysis
2015-08-13 QuantifQuantile Estimation of Conditional Quantiles using Optimal Quantization
2015-08-13 rase Range Ancestral State Estimation for Phylogeography and Comparative Analyses
2015-08-13 rebmix Rough - Enhanced - Bayesian Finite Mixture Modeling
2015-08-13 SciencesPo A Tool Set for Analyzing Political Behavior Data
2015-08-13 sdcTable Methods for Statistical Disclosure Control in Tabular Data
2015-08-13 shinyjs Perform Common JavaScript Operations in Shiny Apps using Plain R Code
2015-08-13 SIBER Stable Isotope Bayesian Ellipses in R
2015-08-13 trib Analysing and Visualizing Tribology Measurements
2015-08-12 ClimClass Climate Classification According to Several Indices
2015-08-12 clinfun Clinical Trial Design and Data Analysis Functions
2015-08-12 creditr Credit Default Swaps in R
2015-08-12 dbscan Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
2015-08-12 geojsonio Convert Data from and to 'geoJSON' or 'topoJSON'
2015-08-12 git2r Provides Access to Git Repositories
2015-08-12 hoa Higher Order Likelihood Inference
2015-08-12 latex2exp Use LaTeX Expressions in Plots
2015-08-12 MDimNormn Multi-Dimensional MA Normalization for Plate Effect
2015-08-12 merTools Tools for Analyzing Mixed Effect Regression Models
2015-08-12 MethylCapSig Detection of Differentially Methylated Regions using MethylCap-Seq Data
2015-08-12 mixexp Design and Analysis of Mixture Experiments
2015-08-12 MM2S Single-Sample Classifier of Medulloblastoma Subtypes for Medulloblastoma Patient Samples, Mouse Models, and Cell Lines
2015-08-12 mmc Multivariate Measurement Error Correction
2015-08-12 mvSLOUCH Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2015-08-12 onlinePCA Online Principal Component Analysis
2015-08-12 tableone Create "Table 1" to Describe Baseline Characteristics
2015-08-11 arulesSequences Mining Frequent Sequences
2015-08-11 bamdit Bayesian Meta-Analysis of Diagnostic Test Data
2015-08-11 BiTrinA Binarization and Trinarization of One-Dimensional Data
2015-08-11 bssn Birnbaum-Saunders Model Based on Skew-Normal Distribution
2015-08-11 dosresmeta Performing Multivariate Dose-Response Meta-Analysis
2015-08-11 dynRB Dynamic Range Boxes
2015-08-11 G2Sd Grain-Size Statistics and Description of Sediment
2015-08-11 gdistance Distances and Routes on Geographical Grids
2015-08-11 GERGM Estimation and Fit Diagnostics for Generalized Exponential Random Graph Models
2015-08-11 h5 Interface to the 'HDF5' Library
2015-08-11 HRM High-Dimensional Repeated Measures
2015-08-11 poweRlaw Analysis of Heavy Tailed Distributions
2015-08-11 praise Praise Users
2015-08-11 RateDistortion Routines for Solving Rate-Distortion Problems
2015-08-11 restlos Robust Estimation of Location and Scatter
2015-08-11 rpf Response Probability Functions
2015-08-11 RUnit R Unit Test Framework
2015-08-11 vardpoor Variance Estimation for Sample Surveys by the Ultimate Cluster Method
2015-08-10 ctsem Continuous Time Structural Equation Modelling
2015-08-10 cusp Cusp-Catastrophe Model Fitting Using Maximum Likelihood
2015-08-10 ExtremeBounds Extreme Bounds Analysis (EBA)
2015-08-10 GameTheory Cooperative Game Theory
2015-08-10 gMCP Graph Based Multiple Comparison Procedures
2015-08-10 ImportExport Import and Export Data
2015-08-10 LLSR Data Analysis of Liquid-Liquid Systems
2015-08-10 Luminescence Comprehensive Luminescence Dating Data Analysis
2015-08-10 MixMAP Implements the MixMAP Algorithm
2015-08-10 mutossGUI A Graphical User Interface for the MuToss Project
2015-08-10 ocomposition Regression for Rank-Indexed Compositional Data
2015-08-10 ore An R Interface to the Oniguruma Regular Expression Library
2015-08-10 shinystan Interactive Visual and Numerical Diagnostics and Posterior Analysis for for Bayesian Models
2015-08-10 slfm Tools for Fitting Sparse Latent Factor Model
2015-08-10 smacof Multidimensional Scaling
2015-08-10 SpaDES Develop and Run Spatially Explicit Discrete Event Simulation Models
2015-08-10 SWMPr Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2015-08-10 TapeR Flexible Tree Taper Curves Based on Semiparametric Mixed Models
2015-08-10 threg Threshold Regression
2015-08-09 bigsplines Smoothing Splines for Large Samples
2015-08-09 biotools Tools for Biometry and Applied Statistics in Agricultural Science
2015-08-09 cdcfluview Retrieve U.S. Flu Season Data from the CDC FluView Portal
2015-08-09 JacobiEigen Classical Jacobi Eigensolution Algorithm
2015-08-09 JoSAE Functions for some Unit-Level Small Area Estimators and their Variances
2015-08-09 missDeaths 'Correctly Analyse Disease Recurrence with Missing at Risk Information using Population Mortality'
2015-08-09 MST Multivariate Survival Trees
2015-08-09 NAM Nested Association Mapping Analysis
2015-08-09 perspectev Permutation of Species During Turnover Events
2015-08-09 rafalib Convenience Functions for Routine Data Exploration
2015-08-09 wppExplorer Explorer of World Population Prospects
2015-08-08 AssocTests Genetic Association Studies
2015-08-08 drat Drat R Archive Template
2015-08-08 funtimes Functions for Time Series Analysis
2015-08-08 listenv Environments Behaving (Almost) as Lists
2015-08-08 RVAideMemoire Diverse Basic Statistical and Graphical Functions
2015-08-08 schumaker Schumaker Shape-Preserving Spline
2015-08-08 solidearthtide Solid Earth Tide Computation
2015-08-08 threewords Represent Precise Coordinates in Three Words
2015-08-08 wpp2015 World Population Prospects 2015
2015-08-07 bacr Bayesian Adjustment for Confounding
2015-08-07 BCEs0 Bayesian Models for Cost-Effectiveness Analysis in the Presence of Structural Zero Costs
2015-08-07 biomartr Functional Annotation and Biological Data Retrieval with R
2015-08-07 Ecdat Data Sets for Econometrics
2015-08-07 ELYP Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
2015-08-07 enaR Tools for Ecological Network Analysis
2015-08-07 pid Process Improvement using Data
2015-08-07 quantable Streamline Descriptive Analysis of Quantitative Data Matrices
2015-08-07 RAdwords Loading Google Adwords Data into R
2015-08-07 readstata13 Import Stata 13 and 14 Data Files
2015-08-07 Rfacebook Access to Facebook API via R
2015-08-07 R.filesets Easy Handling of and Access to Files Organized in Structured Directories
2015-08-07 STEPCAM ABC-SMC Inference of STEPCAM
2015-08-07 taxize Taxonomic Information from Around the Web
2015-08-06 alineR Alignment of Phonetic Sequences Using the 'ALINE' Algorithm
2015-08-06 aoos Another Object Orientation System
2015-08-06 BMhyd PCM for Hybridization
2015-08-06 car Companion to Applied Regression
2015-08-06 crch Censored Regression with Conditional Heteroscedasticity
2015-08-06 CTTShiny Classical Test Theory via Shiny
2015-08-06 fulltext Full Text of 'Scholarly' Articles Across Many Data Sources
2015-08-06 GiANT Gene Set Uncertainty in Enrichment Analysis
2015-08-06 hashr Hash R Objects to Integers Fast
2015-08-06 HiClimR Hierarchical Climate Regionalization
2015-08-06 hwde Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci
2015-08-06 ibmdbR IBM in-Database Analytics for R
2015-08-06 LFDR.MLE Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation
2015-08-06 mmand Mathematical Morphology in Any Number of Dimensions
2015-08-06 olctools Open Location Code Handling in R
2015-08-06 pairwiseCI Confidence Intervals for Two Sample Comparisons
2015-08-06 partitions Additive Partitions of Integers
2015-08-06 pez Phylogenetics for the Environmental Sciences
2015-08-06 refund Regression with Functional Data
2015-08-06 tumgr Tumor Growth Rate Analysis
2015-08-06 udunits2 Udunits-2 Bindings for R
2015-08-06 UsingR Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition
2015-08-05 biosignalEMG Tools for Electromyogram Signals (EMG) Analysis
2015-08-05 broman Karl Broman's R Code
2015-08-05 btergm Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
2015-08-05 camtrapR Camera Trap Photograph Management and Preparation of Occupancy Analyses
2015-08-05 clusterSEs Calculate Cluster-Robust p-Values and Confidence Intervals
2015-08-05 credule Credit Default Swap Functions
2015-08-05 DVHmetrics Analyze Dose-Volume Histograms and Check Constraints
2015-08-05 e1071 Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
2015-08-05 EEM Read and Analyze Fluorescence Excitation-Emission Matrix (EEM) Data
2015-08-05 FactoClass Combination of Factorial Methods and Cluster Analysis
2015-08-05 ftsa Functional Time Series Analysis
2015-08-05 GMCM Fast Estimation of Gaussian Mixture Copula Models
2015-08-05 kernlab Kernel-Based Machine Learning Lab
2015-08-05 MAVIS Meta Analysis via Shiny
2015-08-05 PCA4TS Segmenting Multiple Time Series by Contemporaneous Linear Transformation
2015-08-05 pmml Generate PMML for Various Models
2015-08-05 pmmlTransformations Transforms Input Data from a PMML Perspective
2015-08-05 rplos Interface to the Search 'API' for 'PLoS' Journals
2015-08-05 sdwd Sparse Distance Weighted Discrimination
2015-08-05 shiny Web Application Framework for R
2015-08-05 statnet.common Common R Scripts and Utilities Used by the Statnet Project Software
2015-08-05 summarytools Dataframe Summaries, Frequency Tables and Numerical Summaries with Customizable Output
2015-08-05 tgcd Thermoluminescence Glow Curve Deconvolution
2015-08-05 TOC Total Operating Characteristic Curve and ROC Curve
2015-08-05 W2CWM2C A Graphical Tool for Wavelet (Cross) Correlation and Wavelet Multiple (Cross) Correlation Analysis
2015-08-04 BenfordTests Statistical Tests for Evaluating Conformity to Benford's Law
2015-08-04 crunch Crunch.io Data Tools
2015-08-04 dr Methods for Dimension Reduction for Regression
2015-08-04 GoFKernel Testing Goodness-of-Fit with the Kernel Density Estimator
2015-08-04 hamlet Hierarchical Optimal Matching and Machine Learning Toolbox
2015-08-04 httpuv HTTP and WebSocket Server Library
2015-08-04 MetaLandSim A Tool for Landscape and Range Expansion Simulation
2015-08-04 randNames Package Provides Access to Fake User Data
2015-08-04 RcmdrMisc R Commander Miscellaneous Functions
2015-08-04 rDEA Robust Data Envelopment Analysis (DEA) for R
2015-08-04 Rgbp Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data
2015-08-04 RObsDat Data Management for Hydrology and Beyond Using the Observations Data Model
2015-08-04 SemiMarkov Multi-States Semi-Markov Models
2015-08-04 xergm.common Common Infrastructure for Extensions of Exponential Random Graph Models
2015-08-04 yakmoR A Simple Wrapper for the k-Means Library Yakmo
2015-08-03 ALS Multivariate Curve Resolution Alternating Least Squares (MCR-ALS)
2015-08-03 aSPU Adaptive Sum of Powered Score Test
2015-08-03 brms Bayesian Regression Models using Stan
2015-08-03 causaleffect Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
2015-08-03 cwhmisc Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools
2015-08-03 D3M Two Sample Test with Wasserstein Metric
2015-08-03 ggtern An Extension to 'ggplot2', for the Creation of Ternary Diagrams
2015-08-03 kinship2 Pedigree Functions
2015-08-03 mapdata Extra Map Databases
2015-08-03 mapproj Map Projections
2015-08-03 maps Draw Geographical Maps
2015-08-03 pedgene Gene-Level Statistics for Pedigree Data
2015-08-03 pixiedust Tables so Beautifully Fine-Tuned You Will Believe It's Magic
2015-08-03 repo A Resource Manager for R Objects
2015-08-03 ReporteRs Microsoft Word, Microsoft Powerpoint and HTML Documents Generation
2015-08-03 rts Raster Time Series Analysis
2015-08-03 taber Split and Recombine Your Data
2015-08-03 transcribeR Automated Transcription of Audio Files Through the HP IDOL API
2015-08-02 descr Descriptive Statistics
2015-08-02 Ecfun Functions for Ecdat
2015-08-02 fast Implementation of the Fourier Amplitude Sensitivity Test (FAST)
2015-08-02 forecTheta Forecasting Time Series by Theta Method
2015-08-02 GeneNet Modeling and Inferring Gene Networks
2015-08-02 IRISMustangMetrics Statistics and Metrics for Seismic Data
2015-08-02 mixAK Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering
2015-08-02 partools Tools for the 'Parallel' Package
2015-08-02 squash Color-Based Plots for Multivariate Visualization
2015-08-02 xgboost Extreme Gradient Boosting
2015-08-01 ConsRank Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach
2015-08-01 distcomp Computations over Distributed Data without Aggregation
2015-08-01 gendist Generated Probability Distribution Models
2015-08-01 nplr N-Parameter Logistic Regression
2015-08-01 Pasha Preprocessing of Aligned Sequences from HTS Analyses
2015-08-01 rcbalance Large, Sparse Optimal Matching with Refined Covariate Balance
2015-08-01 usdm Uncertainty Analysis for Species Distribution Models
2015-07-31 climwin Climate Window Analysis
2015-07-31 dendextend Extending R's Dendrogram Functionality
2015-07-31 EPGLM Gaussian Approximation of Bayesian Binary Regression Models
2015-07-31 FHtest Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class
2015-07-31 Harvest.Tree Harvest the Classification Tree
2015-07-31 iotools I/O Tools for Streaming
2015-07-31 IsoGene Order-Restricted Inference for Microarray Experiments
2015-07-31 Kernelheaping Kernel Density Estimation for Heaped and Rounded Data
2015-07-31 liftr Dockerize R Markdown Documents
2015-07-31 mipfp Multidimensional Iterative Proportional Fitting and Alternative Models
2015-07-31 MRQoL Minimal Clinically Important Difference and Response Shift Effect for Health-Related Quality of Life
2015-07-31 multcompView Visualizations of Paired Comparisons
2015-07-31 myTAI Performing Phylotranscriptomics with R
2015-07-31 nlstools Tools for Nonlinear Regression Analysis
2015-07-31 oglmx Estimation of Ordered Generalized Linear Models
2015-07-31 optmatch Functions for Optimal Matching
2015-07-31 ORCME Order Restricted Clustering for Microarray Experiments
2015-07-31 OTE Optimal Trees Ensembles for Regression, Classification and Class Membership Probability Estimation
2015-07-31 phonTools Tools for Phonetic and Acoustic Analyses
2015-07-31 rdrop2 Programmatic Interface to the 'Dropbox' API
2015-07-31 ROracle OCI Based Oracle Database Interface for R
2015-07-31 rpca RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components
2015-07-31 spsann Optimization of Sample Configurations using Spatial Simulated Annealing
2015-07-31 sudokuAlt Tools for Making and Spoiling Sudoku Games
2015-07-31 Tmisc Turner Miscellaneous
2015-07-30 bayesDccGarch The Bayesian Dynamic Conditional Correlation GARCH Model
2015-07-30 bnclassify Learning Bayesian Network Classifiers from Data
2015-07-30 bnstruct Bayesian Network Structure Learning from Data with Missing Values
2015-07-30 BRugs Interface to the 'OpenBUGS' MCMC Software
2015-07-30 Cairo R graphics device using cairo graphics library for creating high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG, PostScript) and display (X11 and Win32) output
2015-07-30 CDVine Statistical Inference of C- And D-Vine Copulas
2015-07-30 cmsaf Tools for CM SAF Netcdf Data
2015-07-30 ivmodel Statistical Inference and Sensitivity Analysis for Instrumental Variables Model
2015-07-30 mixOmics Omics Data Integration Project
2015-07-30 nortest Tests for Normality
2015-07-30 plotmo Plot a Model's Response and Residuals
2015-07-30 R2WinBUGS Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
2015-07-30 randtoolbox Toolbox for Pseudo and Quasi Random Number Generation and RNG Tests
2015-07-30 RESS Integrates R and Essentia
2015-07-30 RWinEdt R Interface to WinEdt
2015-07-30 scatterplot3d 3D Scatter Plot
2015-07-30 signal Signal Processing
2015-07-30 wq Exploring Water Quality Monitoring Data
2015-07-30 YuGene A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses
2015-07-29 apsimr Edit, Run and Evaluate APSIM Simulations Easily Using R
2015-07-29 bda Density Estimation for Grouped Data
2015-07-29 biogas Analyze Biogas Data and Predict Biogas Production
2015-07-29 ClamR Time Series Modeling for Climate Change Proxies
2015-07-29 Crossover Analysis and Search of Crossover Designs
2015-07-29 Distance Distance Sampling Detection Function and Abundance Estimation
2015-07-29 dsm Density Surface Modelling of Distance Sampling Data
2015-07-29 FastRWeb Fast Interactive Framework for Web Scripting Using R
2015-07-29 fcros A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
2015-07-29 ggmcmc Tools for Analyzing MCMC Simulations from Bayesian Inference
2015-07-29 googlePublicData Working with Google Public Data Explorer DSPL Metadata Files
2015-07-29 HistogramTools Utility Functions for R Histograms
2015-07-29 HSAUR3 A Handbook of Statistical Analyses Using R (3rd Edition)
2015-07-29 lineup Lining Up Two Sets of Measurements
2015-07-29 lsl Latent Structure Learning
2015-07-29 mrds Mark-Recapture Distance Sampling
2015-07-29 nlsem Fitting Structural Equation Mixture Models
2015-07-29 Pade Padé Approximant Coefficients
2015-07-29 pco Panel Cointegration Tests
2015-07-29 pedometrics Pedometric Tools and Techniques
2015-07-29 pweight P-Value Weighting
2015-07-29 qicharts Quality Improvement Charts
2015-07-29 ranger A Fast Implementation of Random Forests
2015-07-29 RBerkeley Oracle 'Berkeley DB' Interface for R
2015-07-29 RCryptsy Access to Cryptsy Crypto-Currency Exchange Public Information API via R
2015-07-29 refGenome Gene and Splice Site Annotation Using Annotation Data from Ensembl and UCSC Genome Browsers
2015-07-29 rfPermute Estimate Permutation p-Values for Random Forest Importance Metrics
2015-07-29 Rgnuplot R Interface for Gnuplot
2015-07-29 rJava Low-Level R to Java Interface
2015-07-29 RRNA Secondary Structure Plotting for RNA
2015-07-29 sns Stochastic Newton Sampler (SNS)
2015-07-29 SoyNAM Soybean Nested Association Mapping Dataset
2015-07-29 StatMethRank Statistical Methods for Ranking Data
2015-07-29 swfscMisc Miscellaneous Functions for Southwest Fisheries Science Center
2015-07-29 tcR Advanced Data Analysis of T Cell Receptor Repertoires
2015-07-29 TipDatingBeast Using Tip Dates with Phylogenetic Trees in BEAST
2015-07-29 tm.plugin.europresse Import Articles from 'Europresse' Using the 'tm' Text Mining Framework
2015-07-29 twitteR R Based Twitter Client
2015-07-29 UpSetR A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
2015-07-29 webuse Import Stata 'webuse' Datasets
2015-07-29 wiod World Input Output Database 1995-2011
2015-07-29 yhatr R Binder for the Yhat API
2015-07-28 base64enc Tools for base64 encoding
2015-07-28 bayesSurv Bayesian Survival Regression with Flexible Error and Random Effects Distributions
2015-07-28 BOIN Bayesian Optimal Interval Design for Phase I Clinical Trials
2015-07-28 cpm Sequential and Batch Change Detection Using Parametric and Nonparametric Methods
2015-07-28 cymruservices Query Team Cymru IP Address, Autonomous System Number (ASN), Border Gateway Protocol (BGP), Bogon and Malware Hash Data Services
2015-07-28 dotwhisker Dot-and-Whisker Plots of Regression Coefficients from Tidy Data Frames
2015-07-28 EMbC Expectation-Maximization Binary Clustering
2015-07-28 fasttime Fast Utility Function for Time Parsing and Conversion
2015-07-28 gamlss.mx Fitting Mixture Distributions with GAMLSS
2015-07-28 HSAUR A Handbook of Statistical Analyses Using R (1st Edition)
2015-07-28 HSAUR2 A Handbook of Statistical Analyses Using R (2nd Edition)
2015-07-28 hsdar Manage, Analyse and Simulate Hyperspectral Data
2015-07-28 intsvy International Assessment Data Manager
2015-07-28 ipred Improved Predictors
2015-07-28 MBTAr Access Data from the Massachusetts Bay Transit Authority (MBTA) Web API
2015-07-28 multimark Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks
2015-07-28 MVA An Introduction to Applied Multivariate Analysis with R
2015-07-28 MXM Discovering Multiple, Statistically-Equivalent Signatures
2015-07-28 OptGS Near-Optimal and Balanced Group-Sequential Designs for Clinical Trials with Continuous Outcomes
2015-07-28 PKI Public Key Infrastucture for R Based on the X.509 Standard
2015-07-28 ppiPre Predict Protein-Protein Interactions Based on Functional and Topological Similarities
2015-07-28 PRIMsrc PRIM Survival Regression Classification
2015-07-28 QFRM Pricing of Vanilla and Exotic Option Contracts
2015-07-28 repra Renewable Energy Probability Resource Assessment Tool (REPRA)
2015-07-28 rplexos Read and Analyze 'PLEXOS' Solutions
2015-07-28 RRreg Correlation and Regression Analyses for Randomized Response Data
2015-07-28 RSclient Client for Rserve
2015-07-28 s2dverification Set of Common Tools for Model Diagnostics
2015-07-28 seewave Sound Analysis and Synthesis
2015-07-28 stm Estimation of the Structural Topic Model
2015-07-28 uuid Tools for generating and handling of UUIDs
2015-07-28 WiSEBoot Wild Scale-Enhanced Bootstrap
2015-07-28 woe Computes Weight of Evidence and Information Values
2015-07-27 adagio Discrete and Global Optimization Routines
2015-07-27 changepoint An R Package for Changepoint Analysis
2015-07-27 d3heatmap Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
2015-07-27 dcGOR Analysis of Ontologies and Protein Domain Annotations
2015-07-27 DiscreteLaplace Discrete Laplace Distributions
2015-07-27 FastGP Efficiently Using Gaussian Processes with Rcpp and RcppEigen
2015-07-27 HiveR 2D and 3D Hive Plots for R
2015-07-27 lazyWeave LaTeX Wrappers for R Users
2015-07-27 momr Mining Metaomics Data (MetaOMineR)
2015-07-27 mongolite Fast and Simple 'MongoDB' Client for R
2015-07-27 MPTinR Analyze Multinomial Processing Tree Models
2015-07-27 muRL Mailmerge using R, LaTeX, and the Web
2015-07-27 nor1mix Normal (1-d) Mixture Models (S3 Classes and Methods)
2015-07-27 phyext2 An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase'
2015-07-27 qrage Tools that Create D3 JavaScript Force Directed Graph from R
2015-07-27 rbamtools An R Package for Reading and Writing BAM (Binary Alignment) Files
2015-07-27 RcmdrPlugin.NMBU R Commander Plug-in for University Level Applied Statistics
2015-07-27 rddtools Toolbox for Regression Discontinuity Design ('RDD')
2015-07-27 RGA A Google Analytics API Client
2015-07-27 rngWELL Toolbox for WELL Random Number Generators
2015-07-27 rtop Interpolation of Data with Variable Spatial Support
2015-07-27 sitar Super Imposition by Translation and Rotation Growth Curve Analysis
2015-07-27 smoothSurv Survival Regression with Smoothed Error Distribution
2015-07-27 spectrino Spectra Visualization, Organizer and Data Preparation
2015-07-27 warbleR Streamline Bioacoustic Analysis
2015-07-26 checkmate Fast and Versatile Argument Checks
2015-07-26 COMBIA Synergy/Antagonism Analyses of Drug Combinations
2015-07-26 flam Fits Piecewise Constant Models with Data-Adaptive Knots
2015-07-26 landsat8 Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature
2015-07-26 lsmeans Least-Squares Means
2015-07-26 Mediana Clinical Trial Simulations
2015-07-26 mHG Minimum-Hypergeometric Test
2015-07-26 mixlm Mixed Model ANOVA and Statistics for Education
2015-07-26 packcircles Circle Packing
2015-07-26 RcppZiggurat 'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations
2015-07-26 rstpm2 Flexible Link-Based Survival Models
2015-07-26 tglm Binary Regressions under Independent Student-t Priors
2015-07-25 equivalence Provides Tests and Graphics for Assessing Tests of Equivalence
2015-07-25 glmvsd Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models
2015-07-25 nonlinearTseries Nonlinear Time Series Analysis
2015-07-25 RandomFields Simulation and Analysis of Random Fields
2015-07-25 Rcpp Seamless R and C++ Integration
2015-07-25 rgeolocate IP Address Geolocation
2015-07-25 soilwater Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve
2015-07-25 VideoComparison Video Comparison Tool
2015-07-24 acmeR Implements ACME Estimator of Bird and Bat Mortality by Wind Turbines
2015-07-24 archdata Example Datasets from Archaeological Research
2015-07-24 aspect A General Framework for Multivariate Analysis with Optimal Scaling
2015-07-24 ChemoSpec Exploratory Chemometrics for Spectroscopy
2015-07-24 cjoint AMCE Estimator for Conjoint Experiments
2015-07-24 ddalpha Depth-Based Classification and Calculation of Data Depth
2015-07-24 distillery Method Functions for Confidence Intervals and to Distill Information from an Object
2015-07-24 dynsim Dynamic Simulations of Autoregressive Relationships
2015-07-24 EpiModel Mathematical Modeling of Infectious Disease
2015-07-24 glmm Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation
2015-07-24 in2extRemes Into the extRemes Package
2015-07-24 influence.ME Tools for Detecting Influential Data in Mixed Effects Models
2015-07-24 ISOpureR Deconvolution of Tumour Profiles
2015-07-24 isotone Active Set and Generalized PAVA for Isotone Optimization
2015-07-24 MazamaSpatialUtils Mazama Science Spatial Data Download and Utility Functions
2015-07-24 MicSim Performing Continuous-Time Microsimulation
2015-07-24 modMax Community Structure Detection via Modularity Maximization
2015-07-24 mombf Moment and Inverse Moment Bayes Factors
2015-07-24 npcp Some Nonparametric Tests for Change-Point Detection in Possibly Multivariate Observations
2015-07-24 PharmacoGx Large-Scale Analysis of Pharmacogenomic Data
2015-07-24 phylobase Base Package for Phylogenetic Structures and Comparative Data
2015-07-24 pipe.design Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design
2015-07-24 powerSurvEpi Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies
2015-07-24 quantmod Quantitative Financial Modelling Framework
2015-07-24 randomNames Function for Generating Random Names and a Dataset
2015-07-24 recommenderlab Lab for Developing and Testing Recommender Algorithms
2015-07-24 rEMM Extensible Markov Model for Modelling Temporal Relationships Between Clusters
2015-07-24 rgbif Interface to the Global 'Biodiversity' Information Facility 'API'
2015-07-24 RKlout Fetch Klout Scores for Twitter Users
2015-07-24 rotl Interface to the 'Open Tree of Life' API
2015-07-24 seacarb Seawater Carbonate Chemistry
2015-07-24 spTest Nonparametric Hypothesis Tests of Isotropy and Symmetry
2015-07-24 toOrdinal Function for Converting Cardinal to Ordinal Numbers by Adding a Language Specific Ordinal Indicator to the Number
2015-07-24 TransModel Fit Linear Transformation Models for Censored Data
2015-07-24 varian Variability Analysis in R
2015-07-24 zooaRch Analytical Tools for Zooarchaeological Data
2015-07-23 anacor Simple and Canonical Correspondence Analysis
2015-07-23 BayesComm Bayesian Community Ecology Analysis
2015-07-23 BiodiversityR Package for Community Ecology and Suitability Analysis
2015-07-23 CaDENCE Conditional Density Estimation Network Construction and Evaluation
2015-07-23 cba Clustering for Business Analytics
2015-07-23 colorscience Color Science Methods and Data
2015-07-23 EstHer Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection
2015-07-23 functools Extending Functional Programming in R
2015-07-23 GEVcdn GEV Conditional Density Estimation Network
2015-07-23 homals Gifi Methods for Optimal Scaling
2015-07-23 interplot Plot the Effects of Variables in Interaction Terms
2015-07-23 iptools Manipulate, Validate and Resolve IP Addresses
2015-07-23 mgcv Mixed GAM Computation Vehicle with GCV/AIC/REML Smoothness Estimation
2015-07-23 mixPHM Mixtures of Proportional Hazard Models
2015-07-23 monmlp Monotone Multi-Layer Perceptron Neural Network
2015-07-23 mpath Regularized Linear Models
2015-07-23 multcomp Simultaneous Inference in General Parametric Models
2015-07-23 munsellinterpol Interpolate Munsell Renotation Data from Hue/Chroma to CIE/sRGB
2015-07-23 openair Tools for the Analysis of Air Pollution Data
2015-07-23 pcalg Methods for Graphical Models and Causal Inference
2015-07-23 PGRdup Discover Probable Duplicates in Plant Genetic Resources Collections
2015-07-23 popsom Routines for Constructing and Evaluating Self-Organizing Maps
2015-07-23 PResiduals Probability-Scale Residuals and Residual Correlations
2015-07-23 qrnn Quantile Regression Neural Network
2015-07-23 RaschSampler Rasch Sampler
2015-07-23 reservoir Tools for Analysis, Design, and Operation of Water Supply Storages
2015-07-23 saturnin Spanning Trees Used for Network Inference
2015-07-23 scorer Quickly Score Models
2015-07-23 SparseFactorAnalysis Scaling Count and Binary Data with Sparse Factor Analysis
2015-07-23 spikeSlabGAM Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models
2015-07-23 TraMineRextras TraMineR Extension
2015-07-23 treeClust Cluster Distances Through Trees
2015-07-23 WRS2 Wilcox Robust Estimation and Testing
2015-07-22 actuar Actuarial Functions and Heavy Tailed Distributions
2015-07-22 adehabitat Analysis of Habitat Selection by Animals
2015-07-22 adehabitatHR Home Range Estimation
2015-07-22 adehabitatHS Analysis of Habitat Selection by Animals
2015-07-22 adehabitatLT Analysis of Animal Movements
2015-07-22 adehabitatMA Tools to Deal with Raster Maps
2015-07-22 cquad Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data
2015-07-22 daewr Design and Analysis of Experiments with R
2015-07-22 EMMREML Fitting Mixed Models with Known Covariance Structures
2015-07-22 favnums A Dataset of Favourite Numbers
2015-07-22 gamair Data for "GAMs: An Introduction with R"
2015-07-22 gmodels Various R Programming Tools for Model Fitting
2015-07-22 h2o R Interface for H2O
2015-07-22 highriskzone Determining and Evaluating High-Risk Zones
2015-07-22 htmltab Assemble Data Frames from HTML Tables
2015-07-22 hybridHclust Hybrid Hierarchical Clustering
2015-07-22 imputeTS Time Series Missing Value Imputation
2015-07-22 mri Modified Rand Index (1 and 2.1 and 2.2) and Modified Adjusted Rand Index (1 and 2.1 and 2.2)
2015-07-22 mvtnorm Multivariate Normal and t Distributions
2015-07-22 nadiv (Non)Additive Genetic Relatedness Matrices
2015-07-22 PlotPrjNetworks Useful Networking Tools for Project Management
2015-07-22 Rdistance Distance Sampling Analyses
2015-07-22 RDML Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files
2015-07-22 RJSDMX R Interface to SDMX Web Services
2015-07-22 rncl An Interface to the Nexus Class Library
2015-07-22 robustbase Basic Robust Statistics
2015-07-22 satellite Various Functions for Handling and Manipulating Remote Sensing Data
2015-07-22 stringgaussnet PPI and Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor
2015-07-22 VineCopula Statistical Inference of Vine Copulas
2015-07-22 wikipediatrend Public Subject Attention via Wikipedia Page Access Statistics
2015-07-21 cluster "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
2015-07-21 convoSPAT Convolution-Based Nonstationary Spatial Modeling
2015-07-21 gamlss.dist Distributions to be Used for GAMLSS Modelling
2015-07-21 ifaTools Toolkit for Item Factor Analysis with OpenMx
2015-07-21 IRISSeismic Classes and Methods for Seismic Data Analysis
2015-07-21 jetset One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays
2015-07-21 mkin Routines for Fitting Kinetic Models with One or More State Variables to Chemical Degradation Data
2015-07-21 RealVAMS Multivariate VAM Fitting
2015-07-21 sparsereg Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data
2015-07-20 accrued Data Quality Visualization Tools for Partially Accruing Data
2015-07-20 aprof Amdahl's Profiler, Directed Optimization Made Easy
2015-07-20 bsts Bayesian Structural Time Series
2015-07-20 far Modelization for Functional AutoRegressive Processes
2015-07-20 GLSME Generalized Least Squares with Measurement Error
2015-07-20 GMDH Predicting and Forecasting Time Series via GMDH-Type Neural Network Algorithms
2015-07-20 GNE Computation of Generalized Nash Equilibria
2015-07-20 GPvam Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
2015-07-20 GSIF Global Soil Information Facilities
2015-07-20 gumbel The Gumbel-Hougaard Copula
2015-07-20 icenReg Regression Models for Interval Censored Data
2015-07-20 nbconvertR Vignette Engine Wrapping IPython Notebooks
2015-07-20 PerFit Person Fit
2015-07-20 PTAk Principal Tensor Analysis on k Modes
2015-07-20 rcicr Reverse-Correlation Image-Classification Toolbox
2015-07-20 rgenoud R Version of GENetic Optimization Using Derivatives
2015-07-20 rhosp Side Effect Risks in Hospital : Simulation and Estimation
2015-07-20 RTDE Robust Tail Dependence Estimation
2015-07-20 SeqGrapheR Simple GUI for Graph Based Visualization of Cluster of DNA Sequence Reads
2015-07-20 sybilSBML SBML Integration in Package Sybil
2015-07-20 timedelay Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars
2015-07-20 tsallisqexp Tsallis q-Exp Distribution
2015-07-20 VCA Variance Component Analysis
2015-07-20 yaImpute Nearest Neighbor Observation Imputation and Evaluation Tools
2015-07-19 anoint Analysis of Interactions
2015-07-19 DEoptimR Differential Evolution Optimization in Pure R
2015-07-19 glmgraph Graph-Constrained Regularization for Sparse Generalized Linear Models
2015-07-19 mvglmmRank Multivariate Generalized Linear Mixed Models for Ranking Sports Teams
2015-07-19 nordklimdata1 Dataset for Climate Analysis with Data from the Nordic Region
2015-07-19 pdfetch Fetch Economic and Financial Time Series Data from Public Sources
2015-07-19 popprxl Read GenAlEx Files Directly from Excel
2015-07-19 SDR Subgroup Discovery Algorithms for R
2015-07-19 SigTree Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree
2015-07-19 thermocouple Temperature Measurement with Thermocouples, RTD and IC Sensors
2015-07-19 viridis Matplotlib Default Color Map
2015-07-18 bayesPop Probabilistic Population Projection
2015-07-18 dnet Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology
2015-07-18 kappalab Non-Additive Measure and Integral Manipulation Functions
2015-07-18 lpbrim LP-BRIM Bipartite Modularity
2015-07-18 mediation Causal Mediation Analysis
2015-07-18 mldr Exploratory Data Analysis and Manipulation of Multi-Label Data Sets
2015-07-18 mvtboost Tree Boosting for Multivariate Outcomes
2015-07-18 paco Procrustes Application to Cophylogenetic Analysis
2015-07-18 pcIRT IRT Models for Polytomous and Continuous Item Responses
2015-07-18 pkgconfig Private Configuration for 'R' Packages
2015-07-18 poppr Genetic Analysis of Populations with Mixed Reproduction
2015-07-18 RAHRS Data Fusion Filters for Attitude Heading Reference System (AHRS) with Several Variants of the Kalman Filter and the Mahoney and Madgwick Filters
2015-07-18 rminer Data Mining Classification and Regression Methods
2015-07-18 rstan R Interface to Stan
2015-07-18 ruv Detect and Remove Unwanted Variation using Negative Controls
2015-07-18 statnet Software Tools for the Statistical Analysis of Network Data
2015-07-17 acc Processes Accelerometer Data
2015-07-17 aster Aster Models
2015-07-17 caret Classification and Regression Training
2015-07-17 coala A Framework for Coalescent Simulation
2015-07-17 EDFIR Estimating Discrimination Factors
2015-07-17 flows Flow Selection and Analysis
2015-07-17 gamlss.add Extra Additive Terms for GAMLSS Models
2015-07-17 gamlss.data GAMLSS Data
2015-07-17 gamlss.demo Demos for GAMLSS
2015-07-17 GIGrvg Random Variate Generator for the GIG Distribution
2015-07-17 lmenssp Linear Mixed Effects Models with Non-Stationary Stochastic Processes
2015-07-17 lmms Linear Mixed Effect Model Splines for Modelling and Analysis of Time Course Data
2015-07-17 loo Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models
2015-07-17 mcmc Markov Chain Monte Carlo
2015-07-17 MixedTS Mixed Tempered Stable Distribution
2015-07-17 OpenMx Extended Structural Equation Modelling
2015-07-17 Power2Stage Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies
2015-07-17 qtbase Interface Between R and Qt
2015-07-17 RcppRedis 'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
2015-07-17 RSGHB Functions for Hierarchical Bayesian Estimation: A Flexible Approach
2015-07-17 RSpincalc Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors
2015-07-17 SAFD Statistical Analysis of Fuzzy Data
2015-07-17 SpecHelpers Spectroscopy Related Utilities
2015-07-17 TCGA2STAT TCGA to Statistical Analysis
2015-07-17 Tinflex Tinflex - Universal Non-Uniform Random Number Generator
2015-07-17 vertexenum Vertex Enumeration of Polytopes
2015-07-17 visNetwork Network Visualization using 'vis.js' Library
2015-07-17 WufooR R Wrapper for the 'Wufoo.com' - The Form Building Service
2015-07-16 ACDm Tools for Autoregressive Conditional Duration Models
2015-07-16 captioner Numbers Figures and Creates Simple Captions
2015-07-16 efflog The Causal Effects for a Causal Loglinear Model
2015-07-16 exCon Interactive Exploration of Contour Data
2015-07-16 gamlss.cens Fitting an Interval Response Variable Using gamlss.family Distributions
2015-07-16 geigen Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair
2015-07-16 GOplot Visualization of Functional Analysis Data
2015-07-16 HistDAWass Histogram-Valued Data Analysis
2015-07-16 ibelief Belief Function Implementation
2015-07-16 IDTurtle Identify Turtles by their Plastral Biometries
2015-07-16 LindenmayeR Functions to Explore L-Systems (Lindenmayer Systems)
2015-07-16 lmerTest Tests in Linear Mixed Effects Models
2015-07-16 manifestoR Access and Process Data and Documents of the Manifesto Project
2015-07-16 MASS Support Functions and Datasets for Venables and Ripley's MASS
2015-07-16 midasr Mixed Data Sampling Regression
2015-07-16 monogeneaGM Geometric Morphometric Analysis of Monogenean Anchors
2015-07-16 ncappc NCA Calculation and Population PK Model Diagnosis
2015-07-16 RcppTOML 'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
2015-07-16 rtiff Read and Write TIFF Files
2015-07-16 sdPrior Scale-Dependent Hyperpriors in Structured Additive Distributional Regression
2015-07-16 SparseTSCGM Sparse Time Series Chain Graphical Models
2015-07-16 StanHeaders C++ Header Files for Stan
2015-07-16 stmBrowser Structural Topic Model Browser
2015-07-16 svgPanZoom R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
2015-07-16 webreadr Tools for Reading Formatted Access Log Files
2015-07-16 yuima The YUIMA Project Package for SDEs
2015-07-15 abctools Tools for ABC Analyses
2015-07-15 assertive Readable Check Functions to Ensure Code Integrity
2015-07-15 bcp Bayesian Analysis of Change Point Problems
2015-07-15 Binarize Binarization of One-Dimensional Data
2015-07-15 codetools Code Analysis Tools for R
2015-07-15 crqa Cross-Recurrence Quantification Analysis for Categorical and Continuous Time-Series
2015-07-15 deducorrect Deductive Correction, Deductive Imputation, and Deterministic Correction
2015-07-15 FuncMap Hive Plots of R Package Function Calls
2015-07-15 geocodeHERE Wrapper for Nokia's HERE Geocoding API
2015-07-15 gld Estimation and Use of the Generalised (Tukey) Lambda Distribution
2015-07-15 GSE Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data
2015-07-15 kfigr Integrated Code Chunk Anchoring and Referencing for R Markdown Documents
2015-07-15 locfdr Computes Local False Discovery Rates
2015-07-15 pogit Bayesian Variable Selection for a Poisson-Logistic Model
2015-07-15 pxweb R Interface to the PX-Web/PC-Axis API
2015-07-15 Rdpack Update and Manipulate Rd Documentation Objects
2015-07-15 ridigbio Interface to the iDigBio Data API
2015-07-15 ROMIplot Plots Surfaces of Rates of Mortality Improvement
2015-07-15 ROptimizely R Optimizely API
2015-07-15 stochvol Efficient Bayesian Inference for Stochastic Volatility (SV) Models
2015-07-15 SwarmSVM Ensemble Learning Algorithms Based on Support Vector Machines
2015-07-15 verification Weather Forecast Verification Utilities
2015-07-14 arules Mining Association Rules and Frequent Itemsets
2015-07-14 assertive.base A Lightweight Core of the 'assertive' Package
2015-07-14 dbmss Distance-Based Measures of Spatial Structures
2015-07-14 decode Differential Co-Expression and Differential Expression Analysis
2015-07-14 excel.link Convenient Data Exchange with Microsoft Excel
2015-07-14 extremevalues Univariate Outlier Detection
2015-07-14 future A Future API for R
2015-07-14 gridExtra Miscellaneous Functions for "Grid" Graphics
2015-07-14 HBglm Hierarchical Bayesian Regression for GLMs
2015-07-14 HHG Heller-Heller-Gorfine Tests of Independence and Equality of Distributions
2015-07-14 lattice Trellis Graphics for R
2015-07-14 lm.br Linear Model with Breakpoint
2015-07-14 numbers Number-Theoretic Functions
2015-07-14 polspline Polynomial Spline Routines
2015-07-14 pracma Practical Numerical Math Functions
2015-07-14 pystr Python String Methods in R
2015-07-14 qrjoint Joint Estimation in Linear Quantile Regression
2015-07-14 rattle Graphical User Interface for Data Mining in R
2015-07-14 RcppEigen 'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library
2015-07-14 recommenderlabBX Book-Crossing Dataset (BX) for 'recommenderlab'
2015-07-14 recommenderlabJester Jester Dataset for 'recommenderlab'
2015-07-14 robustlmm Robust Linear Mixed Effects Models
2015-07-14 rsdmx Tools for Reading SDMX Data and Metadata
2015-07-14 rspa Adapt Numerical Records to Fit (in)Equality Restrictions
2015-07-14 SoundexBR Phonetic-Coding for Portuguese
2015-07-14 speciesgeocodeR Prepare Species Distributions for the Use in Phylogenetic Analyses
2015-07-14 stargazer Well-Formatted Regression and Summary Statistics Tables
2015-07-14 sweidnumbr Handling of Swedish Identity Numbers
2015-07-14 TraMineR Trajectory Miner: a Toolbox for Exploring and Rendering Sequences
2015-07-14 treatSens Sensitivity Analysis for Causal Inference
2015-07-13 APSIM General Utility Functions for the 'Agricultural Production Systems Simulator'
2015-07-13 bootLR Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests
2015-07-13 CLME Constrained Inference for Linear Mixed Effects Models
2015-07-13 crayon Colored Terminal Output
2015-07-13 disposables Create Disposable R Packages for Testing
2015-07-13 dynpred Companion Package to "Dynamic Prediction in Clinical Survival Analysis"
2015-07-13 EstCRM Calibrating Parameters for the Samejima's Continuous IRT Model
2015-07-13 ggExtra Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements
2015-07-13 heplots Visualizing Hypothesis Tests in Multivariate Linear Models
2015-07-13 igraphdata A Collection of Network Data Sets for the 'igraph' Package
2015-07-13 npbr Nonparametric Boundary Regression
2015-07-13 oapackage Orthogonal Array Package
2015-07-13 prettyunits Pretty, Human Readable Formatting of Quantities
2015-07-13 rcorpora A Collection of Small Text Corpora of Interesting Data
2015-07-13 Rdsdp R Interface to DSDP Semidefinite Programming Library
2015-07-13 RSocrata Download 'Socrata' Data Sets as R Data Frames
2015-07-13 rversions Query 'R' Versions, Including 'r-release' and 'r-oldrel'
2015-07-13 spareserver Client Side Load Balancing
2015-07-13 spark Sparklines in the 'R' Terminal
2015-07-13 ThresholdROC Threshold Estimation
2015-07-13 whoami Username, Full Name, Email Address, 'GitHub' Username of the Current User
2015-07-12 appnn Amyloid Propensity Prediction Neural Network
2015-07-12 CompareTests Correct for Verification Bias in Diagnostic Accuracy & Agreement
2015-07-12 fame Interface for FAME Time Series Database
2015-07-12 MatchLinReg Combining Matching and Linear Regression for Causal Inference
2015-07-12 RODBCext Parameterized Queries Extension for RODBC
2015-07-12 sads Maximum Likelihood Models for Species Abundance Distributions
2015-07-12 stmCorrViz A Tool for Structural Topic Model Visualizations
2015-07-12 WaterML Fetch and Analyze Data from WaterML or CUAHSI WaterOneFlow Web Service
2015-07-12 WMCapacity GUI Implementing Bayesian Working Memory Models
2015-07-11 arm Data Analysis Using Regression and Multilevel/Hierarchical Models
2015-07-11 asht Applied Statistical Hypothesis Tests
2015-07-11 ChainLadder Statistical Methods and Models for Claims Reserving in General Insurance
2015-07-11 COMPoissonReg Conway-Maxwell Poisson (COM-Poisson) Regression
2015-07-11 crp.CSFP CreditRisk+ Portfolio Model
2015-07-11 cruts Interface to Climatic Research Unit Time-Series Version 3.21 Data
2015-07-11 EcoGenetics Spatial Analysis of Phenotypic, Genotypic and Environmental Data
2015-07-11 MVR Mean-Variance Regularization
2015-07-11 operators Additional Binary Operators
2015-07-11 penalizedLDA Penalized Classification using Fisher's Linear Discriminant
2015-07-11 subplex Unconstrained Optimization using the Subplex Algorithm
2015-07-11 vcdExtra 'vcd' Extensions and Additions
2015-07-10 agRee Various Methods for Measuring Agreement
2015-07-10 argparser Command-Line Argument Parser
2015-07-10 ArgumentCheck Improved Communication to Users with Respect to Problems in Function Arguments
2015-07-10 bayesTFR Bayesian Fertility Projection
2015-07-10 BIFIEsurvey Tools for Survey Statistics in Educational Assessment
2015-07-10 hitandrun "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
2015-07-10 lifecontingencies Financial and Actuarial Mathematics for Life Contingencies
2015-07-10 miceadds Some Additional Multiple Imputation Functions, Especially for 'mice'
2015-07-10 ouch Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2015-07-10 phytools Phylogenetic Tools for Comparative Biology (and Other Things)
2015-07-10 plantecophys Modelling and Analysis of Leaf Gas Exchange Data
2015-07-10 RandomFieldsUtils Utilities for the Simulation and Analysis of Random Fields
2015-07-10 rbhl Interface to the 'Biodiversity' 'Heritage' Library
2015-07-10 rcrossref Client for Various 'CrossRef' 'APIs'
2015-07-10 recoder A Simple and Flexible Recoder
2015-07-10 RJaCGH Reversible Jump MCMC for the Analysis of CGH Arrays
2015-07-10 scout Implements the Scout Method for Covariance-Regularized Regression
2015-07-10 selectspm Select Point Pattern Models Based on Minimum Contrast, AIC and Goodness of Fit
2015-07-10 smaa Stochastic Multi-Criteria Acceptability Analysis
2015-07-10 spatsurv Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models
2015-07-10 TTR Technical Trading Rules
2015-07-09 AcceptanceSampling Creation and Evaluation of Acceptance Sampling Plans
2015-07-09 Biodem Biodemography Functions
2015-07-09 downloader Download Files over HTTP and HTTPS
2015-07-09 edmr Empirical Differentially Methylated Regions Calculation
2015-07-09 eHOF Extended HOF (Huisman-Olff-Fresco) Models
2015-07-09 emil Evaluation of Modeling without Information Leakage
2015-07-09 FactoMineR Multivariate Exploratory Data Analysis and Data Mining
2015-07-09 gamlss.spatial Spatial Terms in GAMLSS Models
2015-07-09 kknn Weighted k-Nearest Neighbors
2015-07-09 mitml Tools for Multiple Imputation in Multilevel Modeling
2015-07-09 penDvine Flexible Pair-Copula Estimation in D-Vines using Bivariate Penalized Splines
2015-07-09 phangorn Phylogenetic Analysis in R
2015-07-09 plotKML Visualization of Spatial and Spatio-Temporal Objects in Google Earth
2015-07-09 PythonInR Use Python from Within R
2015-07-09 rebird R Client for the eBird Database of Bird Observations
2015-07-09 rlist A Toolbox for Non-Tabular Data Manipulation
2015-07-09 spduration Split-Population Duration (Cure) Regression
2015-07-09 topologyGSA Gene Set Analysis Exploiting Pathway Topology
2015-07-09 vegdata Access Vegetation Databases and Treat Taxonomy
2015-07-08 allanvar Allan Variance Analysis
2015-07-08 aTSA Alternative Time Series Analysis
2015-07-08 BAT Biodiversity Assessment Tools
2015-07-08 Benchmarking Benchmark and Frontier Analysis Using DEA and SFA
2015-07-08 bigGP Distributed Gaussian Process Calculations
2015-07-08 binda Multi-Class Discriminant Analysis using Binary Predictors
2015-07-08 BNSP Bayesian Non- and Semi-Parametric Model Fitting
2015-07-08 care High-Dimensional Regression and CAR Score Variable Selection
2015-07-08 cccrm Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures
2015-07-08 clickstream Analyzes Clickstreams Based on Markov Chains
2015-07-08 corpcor Efficient Estimation of Covariance and (Partial) Correlation
2015-07-08 crossval Generic Functions for Cross Validation
2015-07-08 DiscreteWeibull Discrete Weibull Distributions (Type 1 and 3)
2015-07-08 diseasemapping Modelling Spatial Variation in Disease Risk for Areal Data
2015-07-08 enigma Client for the 'Enigma' 'API'
2015-07-08 FatTailsR Kiener Distributions and Fat Tails in Finance
2015-07-08 fdrtool Estimation of (Local) False Discovery Rates and Higher Criticism
2015-07-08 FedData Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
2015-07-08 FuzzyLP Fuzzy Linear Programming
2015-07-08 genoPlotR Plot Publication-Grade Gene and Genome Maps
2015-07-08 GroupSeq A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs
2015-07-08 gsbDesign Group Sequential Bayes Design
2015-07-08 GSM Gamma Shape Mixture
2015-07-08 HWEintrinsic Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem
2015-07-08 icsw Inverse Compliance Score Weighting
2015-07-08 LogisticDx Diagnostic Tests for Models with a Binomial Response
2015-07-08 longitudinal Analysis of Multiple Time Course Data
2015-07-08 LoopAnalyst A Collection of Tools to Conduct Levins' Loop Analysis
2015-07-08 LPM Linear Parametric Models Applied to Hydrological Series
2015-07-08 LSDinterface Reading LSD Results (.res) Files
2015-07-08 matchingMarkets Structural Estimators and Algorithms for the Analysis of Stable Matchings
2015-07-08 Matrix Sparse and Dense Matrix Classes and Methods
2015-07-08 mclust Normal Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
2015-07-08 mederrRank Bayesian Methods for Identifying the Most Harmful Medication Errors
2015-07-08 pipeR Multi-Paradigm Pipeline Implementation
2015-07-08 polyapost Simulating from the Polya Posterior
2015-07-08 PopGenReport A Simple Framework to Analyse Population Genetic Data
2015-07-08 PopVar Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation
2015-07-08 prop.comb.RR Analyzing Combination of Proportions and Relative Risk
2015-07-08 proxy Distance and Similarity Measures
2015-07-08 pse Parameter Space Exploration with Latin Hypercubes
2015-07-08 psych Procedures for Psychological, Psychometric, and Personality Research
2015-07-08 registry Infrastructure for R Package Registries
2015-07-08 rnoaa 'NOAA' Weather Data from R
2015-07-08 sae Small Area Estimation
2015-07-08 sda Shrinkage Discriminant Analysis and CAT Score Variable Selection
2015-07-08 sets Sets, Generalized Sets, Customizable Sets and Intervals
2015-07-08 spatialCovariance Computation of Spatial Covariance Matrices for Data on Rectangles
2015-07-08 sperich Auxiliary Functions to Estimate Centers of Biodiversity
2015-07-08 st Shrinkage t Statistic and Correlation-Adjusted t-Score
2015-07-08 StatDataML Read and Write StatDataML Files
2015-07-08 synthpop Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control
2015-07-08 tailloss Estimate the Probability in the Upper Tail of the Aggregate Loss Distribution
2015-07-08 tspmeta Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem
2015-07-08 vardiag Variogram Diagnostics
2015-07-08 vcd Visualizing Categorical Data
2015-07-08 VPdtw Variable Penalty Dynamic Time Warping
2015-07-08 wskm Weighted k-Means Clustering
2015-07-07 adegenet Exploratory Analysis of Genetic and Genomic Data
2015-07-07 diffeR Metrics of Difference for Comparing Pairs of Maps
2015-07-07 EffectTreat Prediction of Therapeutic Success
2015-07-07 futile.any A Tiny Utility Providing Polymorphic Operations
2015-07-07 fuzzyRankTests Fuzzy Rank Tests and Confidence Intervals
2015-07-07 lawstat Tools for Biostatistics, Public Policy, and Law
2015-07-07 markophylo Markov Chain Models for Phylogenetic Trees
2015-07-07 move Visualizing and Analyzing Animal Track Data
2015-07-07 pwt8 Penn World Table (Version 8.x)
2015-07-07 RcppGSL 'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
2015-07-07 replicationInterval Replication Interval Functions
2015-07-07 Rlibeemd Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN)
2015-07-07 setwidth Automatically Set the Width Option on Terminal Emulators
2015-07-07 SHELF Tools to Support the Sheffield Elicitation Framework (SHELF)
2015-07-07 skellam Densities and Sampling for the Skellam Distribution
2015-07-07 SocialPosition Social Position Indicators Construction Toolbox
2015-07-07 spoccutils Utilities for Use with 'spocc'
2015-07-07 Traitspace A Predictive Model for Trait Based Community Assembly of Plant Species
2015-07-07 unfoldr Stereological Unfolding for Spheroidal Particles
2015-07-07 VIM Visualization and Imputation of Missing Values
2015-07-07 wsrf Weighted Subspace Random Forest for Classification
2015-07-06 deSolve Solvers for Initial Value Problems of Differential Equations (ODE, DAE, DDE)
2015-07-06 HiddenMarkov Hidden Markov Models
2015-07-06 iBATCGH Integrative Bayesian Analysis of Transcriptomic and CGH Data
2015-07-06 label.switching Relabelling MCMC Outputs of Mixture Models
2015-07-06 LeafArea Rapid Digital Image Analysis of Leaf Area
2015-07-06 MultiPhen A Package to Test for Pleiotropic Effects
2015-07-06 pi0 Estimating the Proportion of True Null Hypotheses for FDR
2015-07-06 rcdd Computational Geometry
2015-07-06 SamplerCompare A Framework for Comparing the Performance of MCMC Samplers
2015-07-06 sdef Synthesizing List of Differentially Expressed Features
2015-07-06 StAMPP Statistical Analysis of Mixed Ploidy Populations
2015-07-05 AHR Estimation and Testing of Average Hazard Ratios
2015-07-05 baseline Baseline Correction of Spectra
2015-07-05 bit64 A S3 Class for Vectors of 64bit Integers
2015-07-05 dequer An R 'Deque' Container
2015-07-05 genderizeR Gender Prediction Based on First Names
2015-07-05 googlesheets Manage Google Spreadsheets from R
2015-07-05 gromovlab Gromov-Hausdorff Type Distances for Labeled Metric Spaces
2015-07-05 lctools Local Correlation, Spatial Inequalities and Other Tools
2015-07-05 potts Markov Chain Monte Carlo for Potts Models
2015-07-05 qdap Bridging the Gap Between Qualitative Data and Quantitative Analysis
2015-07-05 rLTP R Interface to LTP-Cloud Service
2015-07-05 rredis "Redis" Key/Value Database Client
2015-07-05 schoRsch Tools for Analyzing Factorial Experiments
2015-07-04 ecespa Functions for Spatial Point Pattern Analysis
2015-07-04 forams Foraminifera and Community Ecology Analyses
2015-07-04 gdata Various R Programming Tools for Data Manipulation
2015-07-04 GLDEX Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods
2015-07-04 GLDreg Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data
2015-07-04 Interatrix Compute Chi-Square Measures with Corrections
2015-07-04 kinfit Routines for Fitting Kinetic Models to Chemical Degradation Data
2015-07-04 nat.utils File System Utility Functions for 'NeuroAnatomy Toolbox'
2015-07-04 OrdFacReg Least Squares, Logistic, and Cox-Regression with Ordered Predictors
2015-07-04 patchSynctex Communication Between Editor and Viewer for Literate Programs
2015-07-04 pooh Partial Orders and Relations
2015-07-04 RBitly R Wrapper for the Bit.ly API
2015-07-04 RedditExtractoR Reddit Data Extraction Toolkit
2015-07-04 reporttools Generate LaTeX Tables of Descriptive Statistics
2015-07-04 smoothtail Smooth Estimation of GPD Shape Parameter
2015-07-04 spocc Interface to Species Occurrence Data Sources
2015-07-04 trust Trust Region Optimization
2015-07-04 tseriesEntropy Entropy Based Analysis and Tests for Time Series
2015-07-04 VTrack A Collection of Tools for the Analysis of Remote Acoustic Telemetry Data
2015-07-03 abd The Analysis of Biological Data
2015-07-03 bpcp Beta Product Confidence Procedure for Right Censored Data
2015-07-03 corrgram Plot a Correlogram
2015-07-03 DSL Distributed Storage and List
2015-07-03 elastic General Purpose Interface to 'Elasticsearch'
2015-07-03 EpiContactTrace Epidemiological Tool for Contact Tracing
2015-07-03 exactci Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
2015-07-03 gamlss Generalised Additive Models for Location Scale and Shape
2015-07-03 geo Draw and Annotate Maps, Especially Charts of the North Atlantic
2015-07-03 gistr Work with 'GitHub' 'Gists'
2015-07-03 gnumeric Read Data from Files Readable by Gnumeric
2015-07-03 goftest Classical Goodness-of-Fit Tests for Univariate Distributions
2015-07-03 GPareto Gaussian Processes for Pareto Front Estimation and Optimization
2015-07-03 HandTill2001 Multiple Class Area under ROC Curve
2015-07-03 hive Hadoop InteractiVE
2015-07-03 HydeNet Hybrid Bayesian Networks Using R and JAGS
2015-07-03 IBDsim Simulation of Chromosomal Regions Shared by Family Members
2015-07-03 logcondens Estimate a Log-Concave Probability Density from iid Observations
2015-07-03 logcondiscr Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations
2015-07-03 LogicReg Logic Regression
2015-07-03 logspline Logspline Density Estimation Routines
2015-07-03 lucid Printing Floating Point Numbers in a Human-Friendly Format
2015-07-03 maSAE Mandallaz' Model-Assisted Small Area Estimators
2015-07-03 metaplus Robust Meta-Analysis and Meta-Regression
2015-07-03 modehunt Multiscale Analysis for Density Functions
2015-07-03 mountainplot Mountain Plots, Folded Empirical Cumulative Distribution Plots
2015-07-03 MuMIn Multi-Model Inference
2015-07-03 NLP Natural Language Processing Infrastructure
2015-07-03 openxlsx Read, Write and Edit XLSX Files
2015-07-03 paramlink Parametric Linkage Analysis in R
2015-07-03 parma Portfolio Allocation and Risk Management Applications
2015-07-03 powerGWASinteraction Power Calculations for GxE and GxG Interactions for GWAS
2015-07-03 PtProcess Time Dependent Point Process Modelling
2015-07-03 rmgarch Multivariate GARCH Models
2015-07-03 rnrfa UK National River Flow Archive Data from R
2015-07-03 Rpoppler PDF Tools Based on Poppler
2015-07-03 rseedcalc Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing
2015-07-03 selectMeta Estimation of Weight Functions in Meta Analysis
2015-07-03 signalHsmm Predict Presence of Signal Peptides
2015-07-03 spd Semi Parametric Distribution
2015-07-03 tagcloud Tag Clouds
2015-07-03 TestScorer GUI for Entering Test Items and Obtaining Raw and Transformed Scores
2015-07-03 tileHMM Hidden Markov Models for ChIP-on-Chip Analysis
2015-07-03 tm Text Mining Package
2015-07-03 ump Uniformly Most Powerful Tests
2015-07-03 WriteXLS Cross-Platform Perl Based R Function to Create Excel 2003 (XLS) and Excel 2007 (XLSX) Files
2015-07-02 AGSDest Estimation in Adaptive Group Sequential Trials
2015-07-02 arulesNBMiner Mining NB-Frequent Itemsets and NB-Precise Rules
2015-07-02 autoencoder Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data
2015-07-02 binseqtest Exact Binary Sequential Designs and Analysis
2015-07-02 ComplexAnalysis Numerically Evaluate Integrals and Derivatives (also Higher Order) of Vector- And Complex-Valued Functions
2015-07-02 dsample Discretization-Based Direct Random Sample Generation
2015-07-02 geosphere Spherical Trigonometry
2015-07-02 gss General Smoothing Splines
2015-07-02 gsscopu Copula Density and 2-D Hazard Estimation using Smoothing Splines
2015-07-02 itsadug Interpreting Time Series and Autocorrelated Data Using GAMMs
2015-07-02 memuse Memory Estimation Utilities
2015-07-02 meta General Package for Meta-Analysis
2015-07-02 multipleNCC Weighted Cox-Regression for Nested Case-Control Data
2015-07-02 NCA Necessary Condition Analysis
2015-07-02 neuroim Read, Write, and Process Brain Imaging Data
2015-07-02 NHANES Data from the US National Health and Nutrition Examination Study
2015-07-02 pheatmap Pretty Heatmaps
2015-07-02 rbison Interface to the 'USGS' 'BISON' 'API'
2015-07-02 RenextGUI GUI for Renext
2015-07-02 Rglpk R/GNU Linear Programming Kit Interface
2015-07-02 RRTCS Randomized Response Techniques for Complex Surveys
2015-07-02 scuba Diving Calculations and Decompression Models
2015-07-02 SRCS Statistical Ranking Color Scheme for Multiple Pairwise Comparisons
2015-07-02 stream Infrastructure for Data Stream Mining
2015-07-02 streamMOA Interface for MOA Stream Clustering Algorithms
2015-07-02 survival Survival Analysis
2015-07-02 switchr Installing, Managing, and Switching Between Distinct Sets of Installed Packages
2015-07-02 translation.ko R Manuals Literally Translated in Korean
2015-07-02 VIFCP Detecting Change-Points via VIFCP Method
2015-07-01 alphaOutlier Obtain Alpha-Outlier Regions for Well-Known Probability Distributions
2015-07-01 arulesViz Visualizing Association Rules and Frequent Itemsets
2015-07-01 astrochron A Computational Tool for Astrochronology
2015-07-01 autovarCore Automated Vector Autoregression Models and Networks
2015-07-01 bayesmix Bayesian Mixture Models with JAGS
2015-07-01 BEST Bayesian Estimation Supersedes the t-Test
2015-07-01 causalsens Selection Bias Approach to Sensitivity Analysis for Causal Effects
2015-07-01 CDM Cognitive Diagnosis Modeling
2015-07-01 CompR Paired Comparison Data Analysis
2015-07-01 cowplot Streamlined Plot Theme and Plot Annotations for 'ggplot2'
2015-07-01 Delaporte Statistical Functions for the Delaporte Distribution
2015-07-01 epiDisplay Epidemiological Data Display Package
2015-07-01 fitbitScraper Scrapes Data from 'www.fitbit.com'
2015-07-01 FractalParameterEstimation Estimation of Parameters p and q for Randomized Sierpinski Carpet for [p-p-p-q]-Model
2015-07-01 GenCAT Genetic Class Association Testing (GenCAT)
2015-07-01 ggthemes Extra Themes, Scales and Geoms for 'ggplot2'
2015-07-01 gquad G Quadruplex Motif Prediction Tool
2015-07-01 GRANBase Creating Continuously Integrated Package Repositories from Manifests
2015-07-01 HDclassif High Dimensional Supervised Classification and Clustering
2015-07-01 maxstat Maximally Selected Rank Statistics
2015-07-01 medflex Flexible Mediation Analysis Using Natural Effect Models
2015-07-01 MiRSEA 'MicroRNA' Set Enrichment Analysis
2015-07-01 missMDA Handling Missing Values with Multivariate Data Analysis
2015-07-01 nat NeuroAnatomy Toolbox for Analysis of 3D Image Data
2015-07-01 nat.templatebrains NeuroAnatomy Toolbox (nat) Extension for Handling Template Brains
2015-07-01 OneArmPhaseTwoStudy Planing, Monitoring and Evaluating Oncological Phase 2 Studies
2015-07-01 pca3d Three Dimensional PCA Plots
2015-07-01 pollstR Client for the HuffPost Pollster API
2015-07-01 rerddap General Purpose Client for 'ERDDAP' Servers
2015-07-01 rsunlight Interface to 'Sunlight' Foundation 'APIs'
2015-07-01 samplesize Sample Size Calculation for Various t-Tests and Wilcoxon-Test
2015-07-01 sampling Survey Sampling
2015-07-01 scatterD3 D3 Javascript Scatterplot from R
2015-07-01 spectralGP Approximate Gaussian Processes Using the Fourier Basis
2015-07-01 topicmodels Topic Models
2015-07-01 TSP Traveling Salesperson Problem (TSP)
2015-06-30 CARBayes Spatial Generalised Linear Mixed Models for Areal Unit Data
2015-06-30 climdex.pcic PCIC Implementation of Climdex Routines
2015-06-30 gkmSVM Gapped-Kmer Support Vector Machine
2015-06-30 hoardeR Information Retrieval for Genetic Datasets
2015-06-30 iNEXT Interpolation and Extrapolation for Species Diversity
2015-06-30 intergraph Coercion Routines for Network Data Objects
2015-06-30 koRpus An R Package for Text Analysis
2015-06-30 Maeswrap Wrapper Functions for MAESTRA/MAESPA
2015-06-30 pequod Moderated Regression Package
2015-06-30 phenology Tools to Manage a Parametric Function that Describes Phenology
2015-06-30 random True Random Numbers using RANDOM.ORG
2015-06-30 randomizeBE Function to Create a Random List for Crossover Studies
2015-06-30 RCurl General Network (HTTP/FTP/...) Client Interface for R
2015-06-30 XML Tools for Parsing and Generating XML Within R and S-Plus
2015-06-29 agridat Agricultural Datasets
2015-06-29 boot Bootstrap Functions (Originally by Angelo Canty for S)
2015-06-29 class Functions for Classification
2015-06-29 ddeploy Wrapper for the Duke Deploy REST API
2015-06-29 FunChisq Chi-Square and Exact Tests for Non-Parametric Functional Dependencies
2015-06-29 GCPM Generalized Credit Portfolio Model
2015-06-29 gee Generalized Estimation Equation Solver
2015-06-29 HelpersMG Tools for Earth Meteorological Analysis
2015-06-29 hts Hierarchical and Grouped Time Series
2015-06-29 KernSmooth Functions for Kernel Smoothing Supporting Wand & Jones (1995)
2015-06-29 mix Estimation/Multiple Imputation for Mixed Categorical and Continuous Data
2015-06-29 MKmisc Miscellaneous Functions from M. Kohl
2015-06-29 nnet Feed-Forward Neural Networks and Multinomial Log-Linear Models
2015-06-29 pspline Penalized Smoothing Splines
2015-06-29 RODBC ODBC Database Access
2015-06-29 rpart Recursive Partitioning and Regression Trees
2015-06-29 semTools Useful Tools for Structural Equation Modeling
2015-06-29 simsem SIMulated Structural Equation Modeling
2015-06-29 sirt Supplementary Item Response Theory Models
2015-06-29 spatial Functions for Kriging and Point Pattern Analysis
2015-06-29 spatstat Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
2015-06-29 stcm Tools for Inference with Set-Theoretic Comparative Methods
2015-06-29 stringi Character String Processing Facilities
2015-06-29 tree Classification and Regression Trees
2015-06-28 cvxbiclustr Convex Biclustering Algorithm
2015-06-28 ordinal Regression Models for Ordinal Data
2015-06-27 ElemStatLearn Data Sets, Functions and Examples from the Book: "The Elements of Statistical Learning, Data Mining, Inference, and Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman
2015-06-27 knitLatex 'Knitr' Helpers - Mostly Tables
2015-06-27 lba Latent Budget Analysis for Compositional Data
2015-06-27 LncMod Predicting Modulator and Functional/Survival Analysis
2015-06-27 Rvcg Manipulations of Triangular Meshes Based on the 'VCGLIB' API
2015-06-26 amen Additive and Multiplicative Effects Models for Networks and Relational Data
2015-06-26 assertr Assertive Programming for R Analysis Pipelines
2015-06-26 asypow Calculate Power Utilizing Asymptotic Likelihood Ratio Methods
2015-06-26 Bagidis BAses GIving DIStances
2015-06-26 BHH2 Useful Functions for Box, Hunter and Hunter II
2015-06-26 BrailleR Improved Access for Blind Users
2015-06-26 EBEN Empirical Bayesian Elastic Net
2015-06-26 Fahrmeir Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz
2015-06-26 GUTS Fast Calculation of the Likelihood of a Stochastic Survival Model
2015-06-26 igraph Network Analysis and Visualization
2015-06-26 jomo Multilevel Joint Modelling Multiple Imputation
2015-06-26 KFAS Kalman Filter and Smoother for Exponential Family State Space Models
2015-06-26 libamtrack Computational Routines for Proton and Ion Radiotherapy
2015-06-26 MIIVsem Two Stage Least Squares with Model Implied Instrumental Variable Search
2015-06-26 MixGHD Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions
2015-06-26 netmeta Network Meta-Analysis using Frequentist Methods
2015-06-26 Nippon Japanese Utility Functions and Data
2015-06-26 parallelML A Parallel-Voting Algorithm for many Classifiers
2015-06-26 parallelSVM A Parallel-Voting Version of the Support-Vector-Machine Algorithm
2015-06-26 pmc Phylogenetic Monte Carlo
2015-06-26 PPtreeViz Projection Pursuit Classification Tree Visualization
2015-06-26 rentrez Entrez in R
2015-06-26 rvertnet Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
2015-06-26 SenSrivastava Datasets from Sen & Srivastava
2015-06-26 seqMeta Meta-Analysis of Region-Based Tests of Rare DNA Variants
2015-06-26 soilphysics Soil Physical Analysis
2015-06-26 sorvi Finnish Open Government Data Toolkit
2015-06-26 spcadjust Functions for Calibrating Control Charts
2015-06-26 treemap Treemap Visualization
2015-06-26 TROM Transcriptome Overlap Measure
2015-06-26 TSMining Mining Univariate and Multivariate Motifs in Time-Series Data
2015-06-26 unbalanced Racing for Unbalanced Methods Selection
2015-06-26 uniqueAtomMat Finding Unique or Duplicated Rows or Columns for Atomic Matrices
2015-06-26 wgaim Whole Genome Average Interval Mapping for QTL Detection using Mixed Models
2015-06-26 whoapi A 'Whoapi' API Client
2015-06-25 adwave Wavelet Analysis of Genomic Data from Admixed Populations
2015-06-25 covr Test Coverage for Packages
2015-06-25 earth Multivariate Adaptive Regression Splines
2015-06-25 httr Tools for Working with URLs and HTTP
2015-06-25 learnstats An Interactive Environment for Learning Statistics
2015-06-25 Rhpc Permits *apply() Style Dispatch for 'HPC'
2015-06-25 RPPanalyzer Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
2015-06-25 snowFT Fault Tolerant Simple Network of Workstations
2015-06-25 XMRF Markov Random Fields for High-Throughput Genetics Data
2015-06-24 adegraphics An S4 Lattice-Based Package for the Representation of Multivariate Data
2015-06-24 asremlPlus Augments the Use of 'Asreml' in Fitting Mixed Models
2015-06-24 BCEE The Bayesian Causal Effect Estimation Algorithm
2015-06-24 BSGS Bayesian Sparse Group Selection
2015-06-24 cclust Convex Clustering Methods and Clustering Indexes
2015-06-24 chron Chronological Objects which can Handle Dates and Times
2015-06-24 ColorPalette Color Palettes Generator
2015-06-24 cometExactTest Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
2015-06-24 CompareCausalNetworks Interface to Diverse Estimation Methods of Causal Networks
2015-06-24 dae Functions Useful in the Design and ANOVA of Experiments
2015-06-24 EpiBayes Implements Hierarchical Bayesian Models for Epidemiological Applications
2015-06-24 formula.tools Utilities for Formulas, Expressions, Calls and Other Objects
2015-06-24 geospacom Facilitate Generating of Distance Matrices Used in Package 'spacom' and Plotting Data on Maps
2015-06-24 leaflet Create Interactive Web Maps with the JavaScript 'Leaflet' Library
2015-06-24 MAMS Designing Multi-Arm Multi-Stage Studies
2015-06-24 matrixStats Methods that Apply to Rows and Columns of Matrices (and to Vectors)
2015-06-24 netassoc Inference of Species Associations from Co-Occurrence Data
2015-06-24 NLPutils Natural Language Processing Utilities
2015-06-24 openNLPdata Apache OpenNLP Jars and Basic English Language Models
2015-06-24 oz Plot the Australian Coastline and States
2015-06-24 pegas Population and Evolutionary Genetics Analysis System
2015-06-24 polynom A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations
2015-06-24 prc Paired Response Curve
2015-06-24 pscore Standardizing Physiological Composite Risk Endpoints
2015-06-24 pubmed.mineR Text Mining of PubMed Abstracts
2015-06-24 runittotestthat Convert 'RUnit' Test Functions into 'testthat' Tests
2015-06-24 skmeans Spherical k-Means Clustering
2015-06-24 sotkanet Tools for Sotkanet Open Data Portal
2015-06-24 W3CMarkupValidator R Interface to W3C Markup Validation Services
2015-06-23 ClustGeo Clustering of Observations with Geographical Constraints
2015-06-23 Evapotranspiration Modelling Actual, Potential and Reference Crop Evapotranspiration
2015-06-23 geomorph Geometric Morphometric Analyses of 2D/3D Landmark Data
2015-06-23 geosptdb Spatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression
2015-06-23 HLMdiag Diagnostic Tools for Hierarchical (Multilevel) Linear Models
2015-06-23 interpretR Binary Classifier and Regression Model Interpretation Functions
2015-06-23 JM Joint Modeling of Longitudinal and Survival Data
2015-06-23 meteo Spatio-Temporal Analysis and Mapping of Meteorological Observations
2015-06-23 Morpho Calculations and Visualisations Related to Geometric Morphometrics
2015-06-23 OasisR Outright Tool for the Analysis of Spatial Inequalities and Segregation
2015-06-23 pcaBootPlot Create 2D Principal Component Plots with Bootstrapping
2015-06-23 quantregGrowth Growth Charts via Regression Quantiles
2015-06-23 Renext Renewal Method for Extreme Values Extrapolation
2015-06-23 selfea Select Features Reliably with Cohen's Effect Sizes
2015-06-23 Sofi Interfaz interactiva con fines didacticos
2015-06-23 ssanv Sample Size Adjusted for Nonadherence or Variability of Input Parameters
2015-06-23 stationaRy Get Hourly Meteorological Data from Global Stations
2015-06-23 translateSPSS2R Toolset for Translating SPSS-Syntax to R-Code
2015-06-22 aRpsDCA Arps Decline Curve Analysis in R
2015-06-22 biogram N-Gram Analysis of Biological Sequences
2015-06-22 biplotbootGUI Bootstrap on Classical Biplots and Clustering Disjoint Biplot
2015-06-22 BMA Bayesian Model Averaging
2015-06-22 cgwtools Miscellaneous Tools
2015-06-22 cherry Multiple Testing Methods for Exploratory Research
2015-06-22 freqweights Working with Frequency Tables
2015-06-22 import An Import Mechanism for R
2015-06-22 kergp Gaussian Process Laboratory
2015-06-22 lava Latent Variable Models
2015-06-22 metaLik Likelihood Inference in Meta-Analysis and Meta-Regression Models
2015-06-22 parsec Partial Orders in Socio-Economics
2015-06-22 planor Generation of Regular Factorial Designs
2015-06-22 primes Generate and Test for Prime Numbers
2015-06-22 rAvis Interface to the Bird-Watching Dataset Proyecto AVIS
2015-06-22 reglogit Simulation-Based Regularized Logistic Regression
2015-06-22 Rsymphony SYMPHONY in R
2015-06-22 sbmSDP Semidefinite Programming for Fitting Block Models of Equal Block Sizes
2015-06-22 simplexreg Regression Analysis of Proportional Data Using Simplex Distribution
2015-06-22 STMedianPolish Spatio-Temporal Median Polish
2015-06-21 cncaGUI Canonical Non-Symmetrical Correspondence Analysis in R
2015-06-21 FAMILY A Convex Formulation for Modeling Interactions with Strong Heredity
2015-06-21 htmlwidgets HTML Widgets for R
2015-06-20 bayesm Bayesian Inference for Marketing/Micro-Econometrics
2015-06-20 boa Bayesian Output Analysis Program (BOA) for MCMC
2015-06-20 cellranger Translate Spreadsheet Cell Ranges to Rows and Columns
2015-06-20 crrp Penalized Variable Selection in Competing Risks Regression
2015-06-20 hqreg Regularization Paths for Huber Loss Regression and Quantile Regression Penalized by Lasso or Elastic-Net
2015-06-20 latentnet Latent Position and Cluster Models for Statistical Networks
2015-06-20 pryr Tools for Computing on the Language
2015-06-20 RcmdrPlugin.RMTCJags R MTC Jags Rcmdr Plugin
2015-06-20 Sequential Exact Sequential Analysis for Poisson and Binomial Data
2015-06-20 urltools Vectorised Tools for URL Handling and Parsing
2015-06-19 ergm.count Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges
2015-06-19 gamsel Fit Regularization Path for Generalized Additive Models
2015-06-19 graphicalVAR Graphical VAR for Experience Sampling Data
2015-06-19 linkR 3D Lever and Linkage Mechanism Modeling
2015-06-19 multibiplotGUI Multibiplot Analysis in R
2015-06-19 pnf Prime Numbers and Integer Factorization
2015-06-19 scam Shape Constrained Additive Models
2015-06-19 Sejong KoNLP static dictionaries and Sejong project resources
2015-06-19 tmod Transcriptional Module Analysis
2015-06-18 bcrypt 'Blowfish' Password Hashing Algorithm
2015-06-18 directPA Direction Analysis for Pathways and Kinases
2015-06-18 GPLTR Generalized Partially Linear Tree-Based Regression Model
2015-06-18 james.analysis Analysis Tools for the 'JAMES' Framework
2015-06-18 joint.Cox Penalized Likelihood Estimation under the Joint Cox Models Between Tumour Progression and Death for Meta-Analysis
2015-06-18 lfl Linguistic Fuzzy Logic
2015-06-18 migest Methods for the Indirect Estimation of Bilateral Migration
2015-06-18 modQR Multiple-Output Directional Quantile Regression
2015-06-18 riverplot Sankey or Ribbon Plots
2015-06-18 SharpeR Statistical Significance of the Sharpe Ratio
2015-06-18 stepR Fitting Step-Functions
2015-06-18 TESS Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events
2015-06-17 aop Adverse Outcome Pathway Analysis
2015-06-17 controlTest Median Comparison for Two-Sample Right-Censored Survival Data
2015-06-17 geotopbricks An R Plug-in for the Distributed Hydrological Model GEOtop
2015-06-17 hisse Hidden State Speciation and Extinction
2015-06-17 ICC Facilitating Estimation of the Intraclass Correlation Coefficient
2015-06-17 MM2Sdata Gene Expression Datasets for the 'MM2S' Package
2015-06-17 performanceEstimation An Infra-Structure for Performance Estimation of Predictive Models
2015-06-17 phylocurve Phylogenetic Comparative Methods for Function-Valued and Other High-Dimensional Traits
2015-06-17 shinydashboard Create Dashboards with 'Shiny'
2015-06-17 svgViewR 3D Animated Interactive Visualizations Using SVG
2015-06-17 sybil Efficient Constrained Based Modelling in R
2015-06-17 timetools Seasonal/Sequential (Instants/'Durations', Even or not) Time Series
2015-06-16 AdaptFitOS Adaptive Semiparametric Regression with Simultaneous Confidence Bands
2015-06-16 CommT Comparative Phylogeographic Analysis using the Community Tree Framework
2015-06-16 CryptRndTest Statistical Tests for Cryptographic Randomness
2015-06-16 decompr Global-Value-Chain Decomposition
2015-06-16 desiR Desirability Functions for Ranking, Selection, and Data Integration
2015-06-16 DESP Estimation of Diagonal Elements of Sparse Precision-Matrices
2015-06-16 dplyr A Grammar of Data Manipulation
2015-06-16 ergm Fit, Simulate and Diagnose Exponential-Family Models for Networks
2015-06-16 gridGraphviz Drawing Graphs with 'grid'
2015-06-16 mirt Multidimensional Item Response Theory
2015-06-16 packrat A Dependency Management System for Projects and their R Package Dependencies
2015-06-16 PDQutils PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations
2015-06-16 repijson Tools for Handling EpiJSON (Epidemiology Data) Files
2015-06-16 secr Spatially Explicit Capture-Recapture
2015-06-16 synbreed Framework for the Analysis of Genomic Prediction Data using R
2015-06-16 tergm Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models
2015-06-16 TMDb Access to TMDb API - Apiary
2015-06-16 treebase Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
2015-06-16 WGCNA Weighted Correlation Network Analysis
2015-06-16 wux Wegener Center Climate Uncertainty Explorer
2015-06-15 ABCanalysis Computed ABC Analysis
2015-06-15 arqas Application in R for Queueing Analysis and Simulation
2015-06-15 BaBooN Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data
2015-06-15 compendiumdb Tools for Retrieval and Storage of Functional Genomics Data
2015-06-15 coxme Mixed Effects Cox Models
2015-06-15 diagonals Block Diagonal Extraction or Replacement
2015-06-15 DiceDesign Designs of Computer Experiments
2015-06-15 DiceEval Construction and Evaluation of Metamodels
2015-06-15 DYM Did You Mean?
2015-06-15 Factoshiny Perform Factorial Analysis from FactoMineR with a Shiny Application
2015-06-15 FuzzyStatProb Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain
2015-06-15 gWidgets2 Rewrite of gWidgets API for Simplified GUI Construction
2015-06-15 kolmim An Improved Evaluation of Kolmogorov's Distribution
2015-06-15 MSIseq Assess Tumor Microsatellite Instability with a Decision Tree Classifier from Exome Somatic Mutations
2015-06-15 rfigshare An R Interface to 'figshare'
2015-06-15 sgRSEA Enrichment Analysis of CRISPR/Cas9 Knockout Screen Data
2015-06-14 beepr Easily Play Notification Sounds on any Platform
2015-06-14 blme Bayesian Linear Mixed-Effects Models
2015-06-14 clue Cluster Ensembles
2015-06-14 metricsgraphics Create Interactive Charts with the JavaScript 'MetricsGraphics' Library
2015-06-14 mmtfa Model-Based Clustering and Classification with Mixtures of Modified t Factor Analyzers
2015-06-14 nodiv Compares the Distribution of Sister Clades Through a Phylogeny
2015-06-14 peacots Periodogram Peaks in Correlated Time Series
2015-06-14 pks Probabilistic Knowledge Structures
2015-06-14 SKAT SNP-Set (Sequence) Kernel Association Test
2015-06-14 smbinning Optimal Binning for Scoring Modeling
2015-06-14 xergm Extensions of Exponential Random Graph Models
2015-06-13 BIGDAWG Case-Control Analysis of Multi-Allelic Loci
2015-06-13 drgee Doubly Robust Generalized Estimating Equations
2015-06-13 hierband Convex Banding of the Covariance Matrix
2015-06-13 installr Using R to Install Stuff (Such As: R, Rtools, RStudio, Git, and More!)
2015-06-13 likelihoodAsy Functions for Likelihood Asymptotics
2015-06-13 mlr Machine Learning in R
2015-06-13 pkgKitten Create Simple Packages Which Do not Upset R Package Checks
2015-06-13 rmarkdown Dynamic Documents for R
2015-06-12 abbyyR Access to Abbyy Optical Character Recognition (OCR) API
2015-06-12 CopulaREMADA Copula Mixed Effect Models for Bivariate and Trivariate Meta-Analysis of Diagnostic Test Accuracy Studies
2015-06-12 disclapmix Discrete Laplace Mixture Inference using the EM Algorithm
2015-06-12 filematrix File-Backed Matrix Class with Convenient Read and Write Access
2015-06-12 mistat Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti
2015-06-12 nodeHarvest Node Harvest for Regression and Classification
2015-06-12 plyr Tools for Splitting, Applying and Combining Data
2015-06-12 QuantumClone Clustering Mutations using High Throughput Sequencing (HTS) Data
2015-06-12 RcmdrPlugin.HH Rcmdr Support for the HH package
2015-06-12 remote Empirical Orthogonal Teleconnections in R
2015-06-12 RSNNS Neural Networks in R using the Stuttgart Neural Network Simulator (SNNS)
2015-06-12 sensitivity Sensitivity Analysis
2015-06-12 smint Smooth Multivariate Interpolation for Gridded and Scattered Data
2015-06-12 sscor Robust Correlation Estimation and Testing Based on Spatial Signs
2015-06-12 strum STRUctural Modeling of Latent Variables for General Pedigree
2015-06-12 surveillance Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
2015-06-12 traits Species Trait Data from Around the Web
2015-06-11 CCAGFA Bayesian Canonical Correlation Analysis and Group Factor Analysis
2015-06-11 DiagrammeR Create Diagrams and Flowcharts Using R
2015-06-11 dMod Dynamic Modeling and Parameter Estimation in ODE Models
2015-06-11 dygraphs Interface to Dygraphs Interactive Time Series Charting Library
2015-06-11 DynTxRegime Methods for Estimating Dynamic Treatment Regimes
2015-06-11 EditImputeCont Simultaneous Edit-Imputation for Continuous Microdata
2015-06-11 editrules Parsing, Applying, and Manipulating Data Cleaning Rules
2015-06-11 effects Effect Displays for Linear, Generalized Linear, and Other Models
2015-06-11 EntropyExplorer Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression
2015-06-11 ergm.graphlets ERG Modeling Based on Graphlet Properties
2015-06-11 globals Identify Global Objects in R Expressions
2015-06-11 IFP Identifying Functional Polymorphisms
2015-06-11 jagsUI A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
2015-06-11 LTPDvar LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables
2015-06-11 MALDIquant Quantitative Analysis of Mass Spectrometry Data
2015-06-11 mplot Graphical Model Stability and Variable Selection Procedures
2015-06-11 palr Colour Palettes for Data
2015-06-11 pavo Perceptual Analysis, Visualization and Organization of Spectral Color Data in R
2015-06-11 PEIP Geophysical Inverse Theory and Optimization
2015-06-11 sadists Some Additional Distributions
2015-06-11 SpatialExtremes Modelling Spatial Extremes
2015-06-11 spTDyn Spatially Varying and Spatio-Temporal Dynamic Linear Models
2015-06-10 accrual Bayesian Accrual Prediction
2015-06-10 ApacheLogProcessor Process the Apache Web Server Log Combined Files
2015-06-10 celestial Collection of Common Astronomical Conversion Routines and Functions
2015-06-10 cOde Automated C Code Generation for Use with the 'deSolve' and 'bvpSolve' Packages
2015-06-10 decctools Get Energy Data from the UK Dept of Energy and Climate Change
2015-06-10 domino R Console Bindings for the 'Domino Command-Line Client'
2015-06-10 gMWT Generalized Mann-Whitney Type Tests
2015-06-10 InvariantCausalPrediction Invariant Causal Prediction
2015-06-10 magicaxis Pretty Scientific Plotting with Minor-Tick and log Minor-Tick Support
2015-06-10 meboot Maximum Entropy Bootstrap for Time Series
2015-06-10 mlVAR Multi-Level Vector Autoregression
2015-06-10 modelObj A Model Object Framework for Regression Analysis
2015-06-10 P2C2M Posterior Predictive Checks of Coalescent Models
2015-06-10 parallelMap Unified Interface to Parallelization Back-Ends
2015-06-10 RcmdrPlugin.UCA UCA Rcmdr Plug-in
2015-06-10 sem Structural Equation Models
2015-06-10 ssfa Spatial Stochastic Frontier Analysis
2015-06-10 StMoMo Stochastic Mortality Modelling
2015-06-10 switchrGist Publish Package Manifests to GitHub Gists
2015-06-10 VarSelLCM Variable Selection for Model-Based Clustering using the Integrated Complete-Data Likelihood of a Latent Class Model
2015-06-09 CircOutlier Detecting of Outliers in Circular Regression
2015-06-09 CorReg Linear Regression Based on Linear Structure Between Covariates
2015-06-09 Deriv Symbolic Differentiation
2015-06-09 DNMF Discriminant Non-Negative Matrix Factorization
2015-06-09 DT A Wrapper of the JavaScript Library 'DataTables'
2015-06-09 lambda.tools Tools for Modeling Data with Functional Programming
2015-06-09 NHMSAR Non-Homogeneous Markov Switching Autoregressive Models
2015-06-09 optCluster Determine Optimal Clustering Algorithm and Number of Clusters
2015-06-09 papeR A Toolbox for Writing 'knitr', 'Sweave' or Other 'LaTeX'-Based Papers and Reports
2015-06-09 parfm Parametric Frailty Models
2015-06-09 patchDVI Package to Patch .dvi or .synctex Files
2015-06-09 RcppFaddeeva 'Rcpp' Bindings for the 'Faddeeva' Package
2015-06-09 RefManageR Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
2015-06-09 rknn Random KNN Classification and Regression
2015-06-09 strvalidator Process Control and Internal Validation of Forensic STR Kits
2015-06-09 tis Time Indexes and Time Indexed Series
2015-06-08 archiDART Plant Root System Architecture Analysis Using DART and RSML Files
2015-06-08 BNPdensity Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures
2015-06-08 clisymbols Unicode Symbols at the R Prompt
2015-06-08 diptest Hartigan's Dip Test Statistic for Unimodality - Corrected
2015-06-08 flexPM Flexible Parametric Models for Censored and Truncated Data
2015-06-08 inferference Methods for Causal Inference with Interference
2015-06-08 metaSEM Meta-Analysis using Structural Equation Modeling
2015-06-08 RevEcoR Reverse Ecology Analysis on Microbiome
2015-06-08 smnet Smoothing for Stream Network Data
2015-06-07 datastepr An Implementation of a SAS-Style Data Step
2015-06-07 fbroc Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves
2015-06-07 ISwR Introductory Statistics with R
2015-06-07 pgirmess Data Analysis in Ecology
2015-06-07 scrm Simulating the Evolution of Biological Sequences
2015-06-07 statar Tools Inspired by Stata to Manipulate Tabular Data
2015-06-07 vdmR Visual Data Mining Tools for R
2015-06-06 AER Applied Econometrics with R
2015-06-06 BayesGESM Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models
2015-06-06 gap Genetic Analysis Package
2015-06-06 ggvis Interactive Grammar of Graphics
2015-06-06 keypress Wait for a Key Press in a Terminal
2015-06-06 lmtest Testing Linear Regression Models
2015-06-06 nestedRanksTest Mann-Whitney-Wilcoxon Test for Nested Ranks
2015-06-06 SpatPCA Regularized Principal Component Analysis for Spatial Data
2015-06-06 strucchange Testing, Monitoring, and Dating Structural Changes
2015-06-05 enviPat Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry
2015-06-05 ffbase Basic Statistical Functions for Package 'ff'
2015-06-05 lmSupport Support for Linear Models
2015-06-05 mnlogit Multinomial Logit Model
2015-06-05 pcnetmeta Patient-Centered Network Meta-Analysis
2015-06-05 progress Terminal Progress Bars
2015-06-05 Rcell Microscopy Based Cytometry Data Analysis Package
2015-06-05 RMark R Code for Mark Analysis
2015-06-05 RobustEM Robust Mixture Modeling Fitted via Spatial-EM Algorithm for Model-Based Clustering and Outlier Detection
2015-06-05 seismic Predict Information Cascade by Self-Exciting Point Process
2015-06-05 SOPIE Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
2015-06-05 sp Classes and Methods for Spatial Data
2015-06-04 clusterCrit Clustering Indices
2015-06-04 clustMD Model Based Clustering for Mixed Data
2015-06-04 kineticF Framework for the Analysis of Kinetic Visual Field Data
2015-06-04 odds.converter Betting Odds Conversion
2015-06-04 preseqR Predicting Species Accumulation Curves
2015-06-04 SAENET A Stacked Autoencoder Implementation with Interface to 'neuralnet'
2015-06-04 sglasso Lasso Method for RCON(V,E) Models
2015-06-04 ssym Fitting Semi-Parametric log-Symmetric Regression Models
2015-06-04 zetadiv Functions to Compute Compositional Turnover Using Zeta Diversity
2015-06-03 berryFunctions Function Collection Related to Plotting and Hydrology
2015-06-03 CORElearn Classification, Regression and Feature Evaluation
2015-06-03 coreNLP Wrappers Around Stanford CoreNLP Tools
2015-06-03 DAISIE Dynamical Assembly of Islands by Speciation, Immigration and Extinction
2015-06-03 delt Estimation of Multivariate Densities Using Adaptive Partitions
2015-06-03 EnviroStat Statistical Analysis of Environmental Space-Time Processes
2015-06-03 etasFLP Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
2015-06-03 hypervolume High-Dimensional Kernel Density Estimation and Geometry Operations
2015-06-03 kwb.hantush Calculation of Groundwater Mounding Beneath an Infiltration Basin
2015-06-03 mixtox Predictive Toxicity Assessment of Chemical Mixtures
2015-06-03 MLCIRTwithin Latent Class Item Response Theory Models Under 'Within-Item Multi-Dimensionality'
2015-06-03 MVN Multivariate Normality Tests
2015-06-03 nomclust Hierarchical Nominal Clustering Package
2015-06-03 OpasnetUtils Opasnet Modelling Environment Utility Functions
2015-06-03 Peptides Calculate Indices and Theoretical Properties of Protein Sequences
2015-06-03 pointdensityP Point Density for Geospatial Data
2015-06-03 quantregForest Quantile Regression Forests
2015-06-03 repmis Miscellaneous Tools for Reproducible Research
2015-06-03 rNOMADS An Interface to the NOAA Operational Model Archive and Distribution System
2015-06-03 Rtts Convert Text into Speech
2015-06-03 score A Package to Score Behavioral Questionnaires
2015-06-03 surveyeditor Generate a Survey that can be Completed by Survey Respondents
2015-06-03 XHWE X Chromosome Hardy-Weinberg Equilibrium
2015-06-02 bootSVD Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data
2015-06-02 cccd Class Cover Catch Digraphs
2015-06-02 ClustVarLV Clustering of Variables Around Latent Variables
2015-06-02 evolvability Calculation of Evolvability Parameters
2015-06-02 FAOSTAT Download Data from the FAOSTAT Database of the Food and Agricultural Organization (FAO) of the United Nations
2015-06-02 gcmr Gaussian Copula Marginal Regression
2015-06-02 HapEstXXR Multi-Locus Stepwise Regression
2015-06-02 JBTools Misc Small Tools and Helper Functions for Other Code of J. Buttlar
2015-06-02 RcppParallel Parallel Programming Tools for Rcpp
2015-06-02 Rphylopars Phylogenetic Comparative Tools for Missing Data and Within-Species Variation
2015-06-02 spanel Spatial Panel Data Models
2015-06-02 spectral.methods Singular Spectrum Analysis (SSA) Tools for Time Series Analysis
2015-06-02 textcat N-Gram Based Text Categorization
2015-06-02 xml2 Parse XML
2015-06-01 ARTool Aligned Rank Transform
2015-06-01 dkDNA Diffusion Kernels on a Set of Genotypes
2015-06-01 Iso Functions to Perform Isotonic Regression
2015-06-01 PracTools Tools for Designing and Weighting Survey Samples
2015-06-01 rfoaas R Interface to FOAAS
2015-06-01 settings Software Option Settings Manager for R
2015-06-01 ShapeSelectForest Shape Selection for Landsat Time Series of Forest Dynamics
2015-06-01 SpatialVx Spatial Forecast Verification
2015-06-01 WikidataR API Client Library for 'Wikidata'
2015-05-31 coefficientalpha Robust Coefficient Alpha and Omega with Missing and Non-Normal Data
2015-05-31 gmnl Multinomial Logit Models with Random Parameters
2015-05-31 mlxR Simulation of Longitudinal Data
2015-05-31 reconstructr Session Reconstruction and Analysis
2015-05-31 TDAmapper Analyze High-Dimensional Data Using Discrete Morse Theory
2015-05-30 commonmark Bindings to the 'CommonMark' Reference Implementation
2015-05-30 dplR Dendrochronology Program Library in R
2015-05-30 ExtDist Extending the Range of Functions for Probability Distributions
2015-05-30 grpreg Regularization Paths for Regression Models with Grouped Covariates
2015-05-30 hybridEnsemble Build, Deploy and Evaluate Hybrid Ensembles
2015-05-30 influence.SEM Case Influence in Structural Equation Models
2015-05-30 leafletR Interactive Web-Maps Based on the Leaflet JavaScript Library
2015-05-30 RcellData Example Dataset for 'Rcell' Package
2015-05-30 recosystem Recommender System using Matrix Factorization
2015-05-30 signmedian.test Perform Exact Sign Test and Asymptotic Sign Test in Large Samples
2015-05-29 analogue Analogue and Weighted Averaging Methods for Palaeoecology
2015-05-29 ape Analyses of Phylogenetics and Evolution
2015-05-29 cati Community Assembly by Traits: Individuals and Beyond
2015-05-29 dostats Compute Statistics Helper Functions
2015-05-29 esaBcv Estimate Number of Latent Factors and Factor Matrix for Factor Analysis
2015-05-29 EWGoF Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions
2015-05-29 ExomeDepth Calls Copy Number Variants from Targeted Sequence Data
2015-05-29 fdakma Functional Data Analysis: K-Mean Alignment
2015-05-29 gtools Various R Programming Tools
2015-05-29 ltmle Longitudinal Targeted Maximum Likelihood Estimation
2015-05-29 mets Analysis of Multivariate Event Times
2015-05-29 ncdf.tools Easier 'NetCDF' File Handling
2015-05-29 PoisBinOrdNor Data Generation with Poisson, Binary, Ordinal and Normal Components
2015-05-29 readr Read Tabular Data
2015-05-29 rgeos Interface to Geometry Engine - Open Source (GEOS)
2015-05-29 rprime Functions for Working with 'Eprime' Text Files
2015-05-29 RSPS RNA-Seq Power Simulation
2015-05-28 AGD Analysis of Growth Data
2015-05-28 biorxivr Search and Download Papers from the bioRxiv Preprint Server
2015-05-28 depend.truncation Statistical Inference for Parametric and Semiparametric Models Based on Dependently Truncated Data
2015-05-28 discSurv Discrete Time Survival Analysis
2015-05-28 fermicatsR Fermi Large Area Telescope Catalogs
2015-05-28 fishmethods Fishery Science Methods and Models in R
2015-05-28 IgorR Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data)
2015-05-28 LakeMetabolizer Tools for the Analysis of Ecosystem Metabolism
2015-05-28 loopr Uses an Archive to Amend Previous Stages of a Pipe using Current Output
2015-05-28 nabor Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions
2015-05-28 packS4 Toy Example of S4 Package
2015-05-28 RecordLinkage Record Linkage in R
2015-05-28 RhpcBLASctl Control the Number of Threads on 'BLAS'
2015-05-28 rLakeAnalyzer Package for the Analysis of Lake Physics
2015-05-28 Rrdrand 'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
2015-05-28 R.utils Various Programming Utilities
2015-05-28 timereg Flexible Regression Models for Survival Data
2015-05-28 tmap Thematic Maps
2015-05-27 aroma.affymetrix Analysis of Large Affymetrix Microarray Data Sets
2015-05-27 aRxiv Interface to the arXiv API
2015-05-27 BACA Bubble Chart to Compare Biological Annotations by using DAVID
2015-05-27 coenocliner Coenocline Simulation
2015-05-27 empiricalFDR.DESeq2 Simulation-Based False Discovery Rate in RNA-Seq
2015-05-27 evmix Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
2015-05-27 ifctools Italian Fiscal Code ('Codice Fiscale') Utilities
2015-05-27 infuser A Very Basic Templating Engine
2015-05-27 laGP Local Approximate Gaussian Process Regression
2015-05-27 polyclip Polygon Clipping
2015-05-27 RNeXML Semantically Rich I/O for the 'NeXML' Format
2015-05-27 teigen Model-Based Clustering and Classification with the Multivariate t Distribution
2015-05-27 vegan3d Static and Dynamic 3D Plots for the 'vegan' Package
2015-05-26 aroma.core Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
2015-05-26 Exact Unconditional Exact Test
2015-05-26 geeM Solve Generalized Estimating Equations
2015-05-26 kernelFactory Kernel Factory: An Ensemble of Kernel Machines
2015-05-26 knitcitations Citations for Knitr Markdown Files
2015-05-26 lfe Linear Group Fixed Effects
2015-05-26 NMF Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
2015-05-26 operator.tools Utilities for Working with R's Operators
2015-05-26 ordinalCont Ordinal Regression Analysis for Continuous Scales
2015-05-26 reval Repeated Function Evaluation for Sensitivity Analysis
2015-05-26 Rtsne T-Distributed Stochastic Neighbor Embedding using Barnes-Hut Implementation
2015-05-26 soiltexture Functions for Soil Texture Plot, Classification and Transformation
2015-05-26 vegan Community Ecology Package
2015-05-25 EnvStats Package for Environmental Statistics, Including US EPA Guidance
2015-05-25 mda Mixture and Flexible Discriminant Analysis
2015-05-25 mnormt The Multivariate Normal and t Distributions
2015-05-25 plspm Tools for Partial Least Squares Path Modeling (PLS-PM)
2015-05-25 rjstat Read and Write 'JSON-stat' Data Sets
2015-05-25 speedglm Fitting Linear and Generalized Linear Models to Large Data Sets
2015-05-24 MixSim Simulating Data to Study Performance of Clustering Algorithms
2015-05-24 showtext Using Fonts More Easily in R Graphs
2015-05-23 ClustMMDD Variable Selection in Clustering by Mixture Models for Discrete Data
2015-05-23 fastR Foundations and Applications of Statistics Using R
2015-05-23 MCMC.qpcr Bayesian Analysis of qRT-PCR Data
2015-05-23 MTurkR R Client for the MTurk Requester API
2015-05-23 RAM R for Amplicon-Sequencing-Based Microbial-Ecology
2015-05-23 restimizeapi Functions for Working with the 'www.estimize.com' Web Services
2015-05-23 tigerstats R Functions for Elementary Statistics
2015-05-22 acp Autoregressive Conditional Poisson
2015-05-22 bcv Cross-Validation for the SVD (Bi-Cross-Validation)
2015-05-22 coneproj Primal or Dual Cone Projections with Routines for Constrained Regression
2015-05-22 dataview Data and Workspace Browser for Terminals
2015-05-22 dendextendRcpp Faster Dendrogram Manipulation using 'Rcpp'
2015-05-22 denpro Visualization of Multivariate Functions, Sets, and Data
2015-05-22 dpmr Data Package Manager for R
2015-05-22 frbs Fuzzy Rule-Based Systems for Classification and Regression Tasks
2015-05-22 metafor Meta-Analysis Package for R
2015-05-22 mosaic Project MOSAIC Statistics and Mathematics Teaching Utilities
2015-05-22 mvmeta Multivariate and Univariate Meta-Analysis and Meta-Regression
2015-05-22 oce Analysis of Oceanographic Data
2015-05-22 reproducer Reproduce Statistical Analyses and Meta-Analyses
2015-05-22 seroincidence Estimating Infection Rates from Serological Data
2015-05-22 spsurvey Spatial Survey Design and Analysis
2015-05-22 testthat Unit Testing for R
2015-05-22 tmle.npvi Targeted Learning of a NP Importance of a Continuous Exposure
2015-05-22 TSdata 'TSdbi' Illustration
2015-05-21 BH Boost C++ Header Files
2015-05-21 ecp Non-Parametric Multiple Change-Point Analysis of Multivariate Data
2015-05-21 fslr Wrapper Functions for FSL (FMRIB Software Library) from Functional MRI of the Brain (FMRIB)
2015-05-21 kyotil Utility Functions by Youyi, Krisz and Others
2015-05-21 lamW Lambert-W Function
2015-05-21 LDPD Probability of Default Calibration
2015-05-21 meteoForecast Numerical Weather Predictions
2015-05-21 ordPens Selection and/or Smoothing of Ordinal Predictors
2015-05-21 qdapDictionaries Dictionaries and Word Lists for the 'qdap' Package
2015-05-21 R0 Estimation of R0 and Real-Time Reproduction Number from Epidemics
2015-05-21 riceware A Diceware Passphrase Implementation
2015-05-21 simPH Tools for Simulating and Plotting Quantities of Interest Estimated from Cox Proportional Hazards Models
2015-05-21 trip Tools for the Analysis of Animal Track Data
2015-05-21 WhiteStripe White Matter Normalization for Magnetic Resonance Images using Whitestripe
2015-05-21 xtermStyle Terminal Text Formatting Using Escape Sequences
2015-05-20 ARTIVA Time-Varying DBN Inference with the ARTIVA (Auto Regressive TIme VArying) Model
2015-05-20 bigml Bindings for the BigML API
2015-05-20 CausalFX Methods for Estimating Causal Effects from Observational Data
2015-05-20 CHNOSZ Chemical Thermodynamics and Activity Diagrams
2015-05-20 clustertend Check the Clustering Tendency
2015-05-20 decisionSupport Quantitative Support of Decision Making under Uncertainty
2015-05-20 ensembleBMA Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
2015-05-20 list Statistical Methods for the Item Count Technique and List Experiment
2015-05-20 RInside C++ Classes to Embed R in C++ Applications
2015-05-20 shapeR Collection and Analysis of Otolith Shape Data
2015-05-20 SubpathwayGMir Identify Metabolic Subpathways Mediated by MicroRNAs
2015-05-20 TickExec Execution Functions for Tick Data Back Test
2015-05-20 VIGoR Variational Bayesian Inference for Genome-Wide Regression
2015-05-19 FastHCS Robust Algorithm for Principal Component Analysis
2015-05-19 greyzoneSurv Fit a Grey-Zone Model with Survival Data
2015-05-19 hglm Hierarchical Generalized Linear Models
2015-05-19 IATscores Implicit Association Test Scores Using Robust Statistics
2015-05-19 multiplex Analysis of Multiple Social Networks with Algebra
2015-05-19 netgen Network Generator for Combinatorial Graph Problems
2015-05-19 novelist NOVEL Integration of the Sample and Thresholded (NOVELIST) Correlation and Covariance Estimators
2015-05-19 permute Functions for Generating Restricted Permutations of Data
2015-05-19 prevR Estimating Regional Trends of a Prevalence from a DHS
2015-05-19 QCAfalsePositive Tests for Type I Error in Qualitative Comparative Analysis (QCA)
2015-05-19 qrmtools Tools for Quantitative Risk Management
2015-05-19 RbioRXN Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction Data
2015-05-19 RFgroove Importance Measure and Selection for Groups of Variables with Random Forests
2015-05-19 rivervis River Visualisation Tool
2015-05-19 rriskDistributions Fitting Distributions to Given Data or Known Quantiles
2015-05-19 threejs Interactive 3D Scatter Plots and Globes
2015-05-18 Dark The Analysis of Dark Adaptation Data
2015-05-18 ETLUtils Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
2015-05-18 MInt Learn Direct Interaction Networks
2015-05-18 nleqslv Solve Systems of Nonlinear Equations
2015-05-18 ocedata Oceanographic Datasets for Oce
2015-05-18 pander An R Pandoc Writer
2015-05-18 rotationForest Fit and Deploy Rotation Forest Models
2015-05-18 smoof Single and Multi-Objective Optimization Test Functions
2015-05-18 spc Statistical Process Control – Collection of Some Useful Functions
2015-05-18 supcluster Supervised Cluster Analysis
2015-05-18 WikipediR A MediaWiki API Wrapper
2015-05-17 bnlearn Bayesian Network Structure Learning, Parameter Learning and Inference
2015-05-17 FWDselect Selecting Variables in Regression Models
2015-05-17 hergm Hierarchical Exponential-Family Random Graph Models
2015-05-17 odeintr C++ ODE Solvers Compiled on-Demand
2015-05-17 PoisBinOrdNonNor Generation of up to Four Different Types of Variables
2015-05-17 rchallenge A Simple Datascience Challenge System
2015-05-16 fpCompare Reliable Comparison of Floating Point Numbers
2015-05-16 pdR Panel Data Regression: Threshold Model and Unit Root Tests
2015-05-16 plotrix Various Plotting Functions
2015-05-16 TTmoment Sampling and Calculating the First and Second Moments for the Doubly Truncated Multivariate t Distribution
2015-05-15 CatDyn Fishery Stock Assessment by Generalized Depletion Models
2015-05-15 FSInteract Fast Searches for Interactions
2015-05-15 Haplin Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
2015-05-15 nbpMatching Functions for Optimal Non-Bipartite Matching
2015-05-15 NEff Calculating Effective Sizes Based on Known Demographic Parameters of a Population
2015-05-15 pmr Probability Models for Ranking Data
2015-05-15 psidR Build Panel Data Sets from PSID Raw Data
2015-05-15 QuasiSeq Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
2015-05-15 queueing Analysis of Queueing Networks and Models
2015-05-15 rscala Bi-Directional Interface Between R and Scala with Callbacks
2015-05-15 rsem Robust Structural Equation Modeling with Missing Data and Auxiliary Variables
2015-05-15 sdprisk Measures of Risk for the Compound Poisson Risk Process with Diffusion
2015-05-15 virtualspecies Generation of Virtual Species Distributions
2015-05-15 VSURF Variable Selection Using Random Forests
2015-05-14 BinaryEPPM Mean and Variance Modeling of Binary Data
2015-05-14 geoscale Geological Time Scale Plotting
2015-05-14 MCTM Markov Chains Transition Matrices
2015-05-13 compareGroups Descriptive Analysis by Groups
2015-05-13 FeaLect Scores Features for Feature Selection
2015-05-13 gam Generalized Additive Models
2015-05-13 matchingR Gale-Shapley Algorithm in R and C++
2015-05-13 MultiRR Bias, Precision, and Power for Multi-Level Random Regressions
2015-05-13 rehh Searching for Footprints of Selection using Haplotype Homozygosity Based Tests
2015-05-13 rglobi R Interface to Global Biotic Interactions
2015-05-13 rsm Response-Surface Analysis
2015-05-13 stackoverflow Stack Overflow's Greatest Hits
2015-05-12 accelerometry Functions for Processing Minute-to-Minute Accelerometer Data
2015-05-12 addreg Additive Regression for Discrete Data
2015-05-12 biclust BiCluster Algorithms
2015-05-12 DSviaDRM Exploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms
2015-05-12 fastHICA Hierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis
2015-05-12 fclust Fuzzy Clustering
2015-05-12 forecast Forecasting Functions for Time Series and Linear Models
2015-05-12 HAC Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC)
2015-05-12 logbin Relative Risk Regression Using the Log-Binomial Model
2015-05-12 MRIaggr Management, Display, and Processing of Medical Imaging Data
2015-05-12 mvabund Statistical Methods for Analysing Multivariate Abundance Data
2015-05-12 RDS Respondent-Driven Sampling
2015-05-12 sampSurf Sampling Surface Simulation for Areal Sampling Methods
2015-05-12 ssizeRNA Sample Size Calculation for RNA-Seq Experimental Design
2015-05-12 stagePop Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time
2015-05-11 aster2 Aster Models
2015-05-11 boilerpipeR Interface to the Boilerpipe Java Library
2015-05-11 GB2 Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation
2015-05-11 GGIR Raw Accelerometer Data Analysis
2015-05-11 hapassoc Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm
2015-05-11 httk High-Throughput Toxicokinetics
2015-05-11 install.load Check, Install and Load CRAN & USGS GRAN Packages
2015-05-11 mglmn Model Averaging for Multivariate GLM with Null Models
2015-05-11 openssl Bindings to OpenSSL
2015-05-11 pampe Implementation of the Panel Data Approach Method for Program Evaluation
2015-05-11 plsgenomics PLS Analyses for Genomics
2015-05-11 probFDA Probabilistic Fisher Discriminant Analysis
2015-05-11 RNetCDF Interface to NetCDF Datasets
2015-05-11 RVsharing Probability of Sharing Rare Variants among Relatives
2015-05-11 tm.plugin.webmining Retrieve Structured, Textual Data from Various Web Sources
2015-05-11 VGAM Vector Generalized Linear and Additive Models
2015-05-10 csn Closed Skew-Normal Distribution
2015-05-10 pathological Path Manipulation Utilities
2015-05-09 aprean3 Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998)
2015-05-09 devtools Tools to Make Developing R Packages Easier
2015-05-09 LSAfun Applied Latent Semantic Analysis (LSA) Functions
2015-05-09 mirtCAT Computerized Adaptive Testing with Multidimensional Item Response Theory
2015-05-09 solarius An R Interface to SOLAR
2015-05-09 StreamMetabolism Calculate Single Station Metabolism from Diurnal Oxygen Curves
2015-05-08 asVPC Average Shifted Visual Predictive Checks
2015-05-08 CorrMixed Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models
2015-05-08 lsa Latent Semantic Analysis
2015-05-08 powerMediation Power/Sample Size Calculation for Mediation Analysis
2015-05-08 RPEnsemble Random Projection Ensemble Classification
2015-05-08 sgd Stochastic Gradient Descent for Scalable Estimation
2015-05-07 cranlogs Download Logs from the RStudio CRAN Mirror
2015-05-07 dummy Automatic Creation of Dummies with Support for Predictive Modeling
2015-05-07 fishmove Prediction of Fish Movement Parameters
2015-05-07 groc Generalized Regression on Orthogonal Components
2015-05-07 helsinki R Tools for Helsinki Open Data
2015-05-07 NMOF Numerical Methods and Optimization in Finance
2015-05-07 oro.nifti Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
2015-05-07 RImageJROI Read 'ImageJ' Region of Interest (ROI) Files
2015-05-07 RImpala Using Cloudera 'Impala' Through 'R'
2015-05-07 rio A Swiss-Army Knife for Data I/O
2015-05-06 BCEA Bayesian Cost Effectiveness Analysis
2015-05-06 broom Convert Statistical Analysis Objects into Tidy Data Frames
2015-05-06 DTR Estimation and Comparison of Dynamic Treatment Regimes
2015-05-06 openNLP Apache OpenNLP Tools Interface
2015-05-06 rioja Analysis of Quaternary Science Data
2015-05-06 robCompositions Robust Estimation for Compositional Data
2015-05-06 Scale Likert Type Questionnaire Item Analysis
2015-05-06 sdcMicroGUI Graphical User Interface for Package 'sdcMicro'
2015-05-06 SpatialPosition Spatial Position Models
2015-05-05 abc Tools for Approximate Bayesian Computation (ABC)
2015-05-05 abc.data Data Only: Tools for Approximate Bayesian Computation (ABC)
2015-05-05 biwavelet Conduct Univariate and Bivariate Wavelet Analyses
2015-05-05 ebGenotyping Genotyping using Next Generation Sequencing Data
2015-05-05 eha Event History Analysis
2015-05-05 hiertest Convex Hierarchical Testing of Interactions
2015-05-05 labdsv Ordination and Multivariate Analysis for Ecology
2015-05-05 LocFDRPois Functions for Performing Local FDR Estimation when Null and Alternative are Poisson
2015-05-05 mbbefd Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling
2015-05-05 numOSL Numeric Routines for Optically Stimulated Luminescence Dating
2015-05-05 optifunset Set Options if Unset
2015-05-05 PCovR Principal Covariates Regression
2015-05-05 pROC Display and Analyze ROC Curves
2015-05-05 psychomix Psychometric Mixture Models
2015-05-05 qmethod Analysis of Subjective Perspectives Using Q Methodology
2015-05-05 qrng (Randomized) Quasi-Random Number Generators
2015-05-05 reGenotyper Detecting Mislabeled Samples in Genetic Data
2015-05-05 SEERaBomb SEER and Atomic Bomb Survivor Data Analysis Tools
2015-05-05 structSSI Multiple Testing for Hypotheses with Hierarchical or Group Structure
2015-05-04 beeswarm The Bee Swarm Plot, an Alternative to Stripchart
2015-05-04 clustering.sc.dp Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint
2015-05-04 discreteRV Create and Manipulate Discrete Random Variables
2015-05-04 docopt Command-Line Interface Specification Language
2015-05-04 JMbayes Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach
2015-05-04 MAINT.Data Model and Analyse Interval Data
2015-05-04 ncvreg Regularization Paths for SCAD and MCP Penalized Regression Models
2015-05-04 numDeriv Accurate Numerical Derivatives
2015-05-04 parboost Distributed Model-Based Boosting
2015-05-04 PopGenome An Efficient Swiss Army Knife for Population Genomic Analyses
2015-05-04 RANN.L1 Fast Nearest Neighbour Search (Wraps ANN Library) Using L1 Metric
2015-05-04 RcppAnnoy 'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors
2015-05-04 rgr Applied Geochemistry EDA
2015-05-04 Rlinkedin Access to the LinkedIn API via R
2015-05-04 s20x Functions for University of Auckland Course STATS 201/208 Data Analysis
2015-05-04 samplesize4surveys Sample Size Calculations for Complex Surveys
2015-05-04 sdcMicro Statistical Disclosure Control Methods for Anonymization of Microdata and Risk Estimation
2015-05-04 stabledist Stable Distribution Functions
2015-05-03 EW Edgeworth Expansion
2015-05-03 fheatmap Draw Heatmaps with Colored Dendogram
2015-05-03 MapGAM Mapping Smoothed Effect Estimates from Individual-Level Data
2015-05-02 coxinterval Cox-Type Models for Interval-Censored Data
2015-05-02 EvalEst Dynamic Systems Estimation - Extensions
2015-05-02 GDAdata Datasets for the Book Graphical Data Analysis with R
2015-05-02 gplots Various R Programming Tools for Plotting Data
2015-05-02 ig.vancouver.2014.topcolour Instagram 2014 Vancouver Top Colour Dataset
2015-05-02 mixtNB DE Analysis of RNA-Seq Data by Mixtures of NB
2015-05-02 MLmetrics Machine Learning Evaluation Metrics
2015-05-02 muir Exploring Data with Tree Data Structures
2015-05-02 NPCD Nonparametric Methods for Cognitive Diagnosis
2015-05-02 paleotree Paleontological and Phylogenetic Analyses of Evolution
2015-05-02 soundecology Soundscape Ecology
2015-05-02 survJamda Survival Prediction by Joint Analysis of Microarray Gene Expression Data
2015-05-02 survJamda.data Data for Package 'survJambda'
2015-05-02 tidyjson A Grammar for Turning 'JSON' into Tidy Tables
2015-05-02 TSmisc 'TSdbi' Extensions to Wrap Miscellaneous Data Sources
2015-05-01 capm Companion Animal Population Management
2015-05-01 CDNmoney Components of Canadian Monetary and Credit Aggregates
2015-05-01 Comp2ROC Compare Two ROC Curves that Intersect
2015-05-01 confreq Configural Frequencies Analysis Using Log-Linear Modeling
2015-05-01 emdbook Support Functions and Data for "Ecological Models and Data"
2015-05-01 greport Graphical Reporting for Clinical Trials
2015-05-01 mpoly Symbolic Computation and More with Multivariate Polynomials
2015-05-01 ndtv Network Dynamic Temporal Visualizations
2015-05-01 qte Quantile Treatment Effects
2015-05-01 rgl 3D Visualization Using OpenGL
2015-05-01 rms Regression Modeling Strategies
2015-05-01 TScompare 'TSdbi' Database Comparison
2015-05-01 tsfa Time Series Factor Analysis
2015-05-01 uniftest Tests for Uniformity
2015-04-30 bspec Bayesian Spectral Inference
2015-04-30 constrainedKriging Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging
2015-04-30 dfcomb Phase I/II Adaptive Dose-Finding Design for Combination Studies
2015-04-30 dfmta Phase I/II Adaptive Dose-Finding Design for MTA
2015-04-30 EffectLiteR Average and Conditional Effects
2015-04-30 Hmisc Harrell Miscellaneous
2015-04-30 Rchoice Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters
2015-04-30 rCMA R-to-Java Interface for 'CMA-ES'
2015-04-30 relations Data Structures and Algorithms for Relations
2015-04-30 rowr Row-Based Functions for R Objects
2015-04-30 stringr Simple, Consistent Wrappers for Common String Operations
2015-04-30 TripleR Social Relation Model (SRM) Analyses for Single or Multiple Groups
2015-04-30 TSfame 'TSdbi' Extensions for Fame
2015-04-30 TSMySQL 'TSdbi' Extensions for 'MySQL'
2015-04-30 TSodbc 'TSdbi' Extensions for ODBC
2015-04-30 TSPostgreSQL 'TSdbi' Extensions for 'PostgreSQL'
2015-04-30 TSsdmx 'TSdbi' Extension to Connect with 'SDMX'
2015-04-30 TSsql Generic SQL Helper Functions for 'TSdbi' SQL Plugins
2015-04-30 TSSQLite 'TSdbi' Extensions for 'SQLite'
2015-04-29 BCRA Breast Cancer Risk Assessment
2015-04-29 dcemriS4 A Package for Image Analysis of DCE-MRI (S4 Implementation)
2015-04-29 difR Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF)
2015-04-29 dunn.test Dunn's Test of Multiple Comparisons Using Rank Sums
2015-04-29 fastclime A Fast Solver for Parameterized Linear Programming Problems and Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation
2015-04-29 ForeCA Forecastable Component Analysis
2015-04-29 GEOmap Topographic and Geologic Mapping
2015-04-29 GlobalFit Bi-Level Optimization of Metabolic Network Models
2015-04-29 GWLelast Geographically Weighted Logistic Elastic Net Regression
2015-04-29 jiebaR Chinese Text Segmentation
2015-04-29 NPMLEcmprsk Type-Specific Failure Rate and Hazard Rate on Competing Risks Data
2015-04-29 PHENIX Phenotypic Integration Index
2015-04-29 prettyR Pretty Descriptive Stats
2015-04-29 Quandl API Wrapper for Quandl.com
2015-04-29 quickpsy Fits Psychometric Functions for Multiple Groups
2015-04-29 replicatedpp2w Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
2015-04-29 RSEIS Seismic Time Series Analysis Tools
2015-04-29 synbreedData Data for the Synbreed Package
2015-04-29 TeachingSampling Selection of Samples and Parameter Estimation in Finite Population
2015-04-29 TSdbi Time Series Database Interface
2015-04-29 uniqtag Abbreviate Strings to Short, Unique Identifiers
2015-04-29 XBRL Extraction of Business Financial Information from 'XBRL' Documents
2015-04-28 checkpoint Install Packages from Snapshots on the Checkpoint Server for Reproducibility
2015-04-28 Claddis Measuring Morphological Diversity and Evolutionary Tempo
2015-04-28 DIFtree Item Focused Trees for the Identification of Items in Differential Item Functioning
2015-04-28 LambertW Analyze and Gaussianize Heavy-Tailed, Skewed Data
2015-04-28 pairsD3 D3 Scatterplot Matrices
2015-04-28 pgmm Parsimonious Gaussian Mixture Models
2015-04-28 rex Friendly Regular Expressions
2015-04-28 simpleNeural An Easy to Use Multilayer Perceptron
2015-04-28 texreg Conversion of R Regression Output to LaTeX or HTML Tables
2015-04-28 tfplot Time Frame User Utilities
2015-04-28 tframePlus Time Frame Coding Kernel Extensions
2015-04-28 timetree Interface to the TimeTree of Life Webpage
2015-04-27 dynBiplotGUI Full Interactive GUI for Dynamic Biplot in R
2015-04-27 faoutlier Influential Case Detection Methods for Factor Analysis and Structural Equation Models
2015-04-27 fracprolif Fraction Proliferation via a Quiescent Growth Model
2015-04-27 geophys Geophysics, Continuum Mechanics, Mogi Models, Gravity
2015-04-27 geoRglm A Package for Generalised Linear Spatial Models
2015-04-27 hermite Generalized Hermite Distribution
2015-04-27 lfactors Factors with Levels
2015-04-27 mded Measuring the Difference Between Two Empirical Distributions
2015-04-27 migui Graphical User Interface to the 'mi' Package
2015-04-27 NeuralNetTools Visualization and Analysis Tools for Neural Networks
2015-04-27 qlcMatrix Utility Sparse Matrix Functions for Quantitative Language Comparison
2015-04-27 Rquake Seismic Hypocenter Determination
2015-04-27 RTOMO Visualization for Seismic Tomography
2015-04-27 seqDesign Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints
2015-04-27 SLOPE Sorted L1 Penalized Estimation (SLOPE)
2015-04-27 SPOT Sequential Parameter Optimization Toolbox
2015-04-27 StatDA Statistical Analysis for Environmental Data
2015-04-27 support.BWS Basic Functions for Supporting an Implementation of Best-Worst Scaling
2015-04-27 sysfonts Loading System Fonts into R
2015-04-27 zoeppritz Seismic Reflection and Scattering Coefficients
2015-04-26 haplotypes Haplotype Inference and Statistical Analysis of Genetic Variation
2015-04-26 RPMG Graphical User Interface (GUI) for Interactive R Analysis Sessions
2015-04-26 Rwave Time-Frequency Analysis of 1-D Signals
2015-04-25 pcaL1 Three L1-Norm PCA Methods
2015-04-24 DiceKriging Kriging Methods for Computer Experiments
2015-04-24 maptools Tools for Reading and Handling Spatial Objects
2015-04-24 mma Multiple Mediation Analysis
2015-04-24 PBSmapping Mapping Fisheries Data and Spatial Analysis Tools
2015-04-24 rfordummies Code Examples to Accompany the Book "R for Dummies"
2015-04-24 spacetime Classes and Methods for Spatio-Temporal Data
2015-04-24 tsDyn Nonlinear Time Series Models with Regime Switching
2015-04-23 aqp Algorithms for Quantitative Pedology
2015-04-23 geoR Analysis of Geostatistical Data
2015-04-23 LinRegInteractive Interactive Interpretation of Linear Regression Models
2015-04-23 monitoR Acoustic Template Detection in R
2015-04-23 soilDB Soil Database Interface
2015-04-22 effsize Efficient Effect Size Computation
2015-04-22 emg Exponentially Modified Gaussian (EMG) Distribution
2015-04-22 GCD Global Charcoal Database
2015-04-22 gnm Generalized Nonlinear Models
2015-04-22 logmult Log-Multiplicative Models, Including Association Models
2015-04-22 mapStats Geographic Display of Survey Data Statistics
2015-04-22 markdown 'Markdown' Rendering for R
2015-04-22 paleofire Analysis of Charcoal Records from the Global Charcoal Database
2015-04-22 probemod Statistical Tools for Probing Moderation Effects
2015-04-22 RadOnc Analytical Tools for Radiation Oncology
2015-04-22 seedy Simulation of Evolutionary and Epidemiological Dynamics
2015-04-22 sspse Estimating Hidden Population Size using Respondent Driven Sampling Data
2015-04-22 treeperm Exact and Asymptotic K Sample Permutation Test
2015-04-22 visreg Visualization of Regression Models
2015-04-21 blockmodels Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm
2015-04-21 DNAprofiles DNA Profiling Evidence Analysis
2015-04-21 ensurer Ensure Values at Runtime
2015-04-21 formatR Format R Code Automatically
2015-04-21 GENLIB Genealogical Data Analysis
2015-04-21 GUILDS Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure
2015-04-21 GWRM Generalized Waring Regression Model for Count Data
2015-04-21 highr Syntax Highlighting for R Source Code
2015-04-21 htmlTable Advanced Tables for Markdown/HTML
2015-04-21 icd9 Tools for Working with ICD-9 Codes, and Finding Comorbidities
2015-04-21 indicspecies Relationship Between Species and Groups of Sites
2015-04-21 lmomco L-moments, Censored L-moments, Trimmed L-moments, L-comoments, and Many Distributions
2015-04-21 managelocalrepo Manage a CRAN-Style Local Repository
2015-04-21 nLTT Calculate the NLTT Statistic
2015-04-21 R2MLwiN Running 'MLwiN' from Within R
2015-04-21 readGenalex Read, Write, Manipulate and Convert GenAlEx-Format Genotype Files
2015-04-20 ADPclust Fast Clustering Using Adaptive Density Peak Detection
2015-04-20 bayescount Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC
2015-04-20 carcass Estimation of the Number of Fatalities from Carcass Searches
2015-04-20 Frames2 Estimation in Dual Frame Surveys
2015-04-20 fscaret Automated Feature Selection from 'caret'
2015-04-20 futile.logger A Logging Utility for R
2015-04-20 highlight Syntax Highlighter
2015-04-20 icamix Estimation of ICA Mixture Models
2015-04-20 mbest Moment-Based Estimation for Hierarchical Models
2015-04-20 oro.dicom Rigorous - DICOM Input / Output
2015-04-20 prevalence Tools for Prevalence Assessment Studies
2015-04-20 qwraps2 Quick Wraps 2
2015-04-20 RANN Fast Nearest Neighbour Search (Wraps Arya and Mount's ANN Library)
2015-04-20 rLiDAR LiDAR Data Processing and Visualization
2015-04-20 solaR Radiation and Photovoltaic Systems
2015-04-20 sparkTable Sparklines and Graphical Tables for TeX and HTML
2015-04-20 synRNASeqNet Synthetic RNA-Seq Network Generation and Mutual Information Estimates
2015-04-20 userfriendlyscience Quantitative Analysis Made Accessible
2015-04-19 BNPTSclust A Bayesian Nonparametric Algorithm for Time Series Clustering
2015-04-19 candisc Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
2015-04-19 degreenet Models for Skewed Count Distributions Relevant to Networks
2015-04-19 gemtc Network Meta-Analysis Using Bayesian Methods
2015-04-19 mixtools Tools for Analyzing Finite Mixture Models
2015-04-19 phonR Tools for Phoneticians and Phonologists
2015-04-19 PortfolioAnalytics Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios
2015-04-19 R1magic Compressive Sampling: Sparse Signal Recovery Utilities
2015-04-19 tdr Target Diagram
2015-04-19 timeSeq Nonparallel Differential Expressed Genes
2015-04-19 WikipediaR R-Based Wikipedia Client
2015-04-18 BivarP Estimating the Parameters of Some Bivariate Distributions
2015-04-18 bold Interface to Bold Systems API
2015-04-18 cna A Package for Coincidence Analysis (CNA)
2015-04-18 crimelinkage Statistical Methods for Crime Series Linkage
2015-04-18 daff Diff, Patch and Merge for Data.frames
2015-04-18 datacheck Tools for Checking Data Consistency
2015-04-18 gbm2sas Convert GBM Object Trees to SAS Code
2015-04-18 MATA Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval
2015-04-18 NPC Nonparametric Combination of Hypothesis Tests
2015-04-18 plaqr Partially Linear Additive Quantile Regression
2015-04-18 sprex Calculate Species Richness and Extrapolation Metrics
2015-04-18 TDCor Gene Network Inference from Time-Series Transcriptomic Data
2015-04-18 TKF Pairwise Distance Estimation with TKF91 and TKF92 Model
2015-04-17 marl Multivariate Analysis Based on Relative Likelihoods
2015-04-17 TDMR Tuned Data Mining in R
2015-04-17 VLMC Variable Length Markov Chains ('VLMC') Models
2015-04-16 copCAR Fitting the copCAR Regression Model for Discrete Areal Data
2015-04-16 dga Capture-Recapture Estimation using Bayesian Model Averaging
2015-04-16 iterpc Efficient Iterator for Permutations and Combinations
2015-04-16 letsR Tools for Data Handling and Analysis in Macroecology
2015-04-16 mi Missing Data Imputation and Model Checking
2015-04-16 networksis Simulate Bipartite Graphs with Fixed Marginals Through Sequential Importance Sampling
2015-04-16 qclust Robust Estimation of Gaussian Mixture Models
2015-04-16 smoother Functions Relating to the Smoothing of Numerical Data
2015-04-16 softclassval Soft Classification Performance Measures
2015-04-15 apex Phylogenetic Methods for Multiple Gene Data
2015-04-15 cernn Covariance Estimation Regularized by Nuclear Norm Penalties
2015-04-15 chillR Statistical Methods for Phenology Analysis in Temperate Fruit Trees
2015-04-15 CoClust Copula Based Cluster Analysis
2015-04-15 cold Count Longitudinal Data
2015-04-15 embryogrowth Tools to Analyze the Thermal Reaction Norm of Embryo Growth
2015-04-15 knockoff Knockoff Filter for Controlling the False Discovery Rate
2015-04-15 rainbow Rainbow Plots, Bagplots and Boxplots for Functional Data
2015-04-15 REST RcmdrPlugin Easy Script Templates
2015-04-15 rjags Bayesian Graphical Models using MCMC
2015-04-15 rmaf Refined Moving Average Filter
2015-04-15 roxygen2 In-Source Documentation for R
2015-04-15 runjags Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS
2015-04-15 SPRT Wald's Sequential Probability Ratio Test
2015-04-15 sse Sample Size Estimation
2015-04-15 survMisc Miscellaneous Functions for Survival Data
2015-04-15 tolerance Functions for Calculating Tolerance Intervals
2015-04-14 ade4 Analysis of Ecological Data : Exploratory and Euclidean Methods in Environmental Sciences
2015-04-14 bild BInary Longitudinal Data
2015-04-14 CRTSize Sample Size Estimation Functions for Cluster Randomized Trials
2015-04-14 drc Analysis of Dose-Response Curves
2015-04-14 flexsurv Flexible Parametric Survival and Multi-State Models
2015-04-14 MissMech Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random
2015-04-14 readxl Read Excel Files
2015-04-14 sivipm Sensitivity Indices with Dependent Inputs
2015-04-13 apc Age-Period-Cohort Analysis
2015-04-13 cancerTiming Estimation of Temporal Ordering of Cancer Abnormalities
2015-04-13 fCertificates Basics of Certificates and Structured Products Valuation
2015-04-13 HiLMM Estimation of Heritability in Linear Mixed Models
2015-04-13 inline Functions to Inline C, C++, Fortran Function Calls from R
2015-04-13 L1pack Routines for L1 Estimation
2015-04-13 metacom Analysis of the "Elements of Metacommunity Structure"
2015-04-13 NbClust Determining the Best Number of Clusters in a Data Set
2015-04-13 R2admb 'ADMB' to R Interface Functions
2015-04-13 retrosheet Import Professional Baseball Data from 'Retrosheet'
2015-04-13 rkafka Using Apache 'Kafka' Messaging Queue Through 'R'
2015-04-13 rstackdeque Persistent Fast Amortized Stack and Queue Data Structures
2015-04-13 smds Symbolic Multidimensional Scaling
2015-04-13 spartan Simulation Parameter Analysis R Toolkit ApplicatioN: Spartan
2015-04-13 subselect Selecting Variable Subsets
2015-04-12 csrplus Methods to Test Hypotheses on the Distribution of Spatial Point Processes
2015-04-12 glmnet Lasso and Elastic-Net Regularized Generalized Linear Models
2015-04-12 heatmap3 An Improved Heatmap Package
2015-04-12 MPV Data Sets from Montgomery, Peck and Vining's Book
2015-04-12 resample Resampling Functions
2015-04-11 fdth Frequency Distribution Tables, Histograms and Polygons
2015-04-11 jsonlite A Robust, High Performance JSON Parser and Generator for R
2015-04-11 lvm4net Latent Variable Models for Networks
2015-04-11 msSurv Nonparametric Estimation for Multistate Models
2015-04-11 peptider Evaluation of Diversity in Nucleotide Libraries
2015-04-10 AID Estimation of Box-Cox Power Transformation Parameter
2015-04-10 BayesLCA Bayesian Latent Class Analysis
2015-04-10 bentcableAR Bent-Cable Regression for Independent Data or Autoregressive Time Series
2015-04-10 chipPCR Toolkit of Helper Functions to Pre-Process Amplification Data
2015-04-10 cocor Comparing Correlations
2015-04-10 data.tree Hierarchical Data Structures
2015-04-10 hiddenf The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity
2015-04-10 nnlasso Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models
2015-04-10 pocrm Dose Finding in Drug Combination Phase I Trials Using PO-CRM
2015-04-10 rkafkajars External Jars Required for Package 'rkafka'
2015-04-10 Thermimage Functions for Handling Thermal Images
2015-04-09 denovolyzeR Statistical Analyses of De Novo Genetic Variants
2015-04-09 dpcR Digital PCR Analysis
2015-04-09 emov Eye Movement Analysis Package for Fixation and Saccade Detection
2015-04-09 expsmooth Data Sets from "Forecasting with Exponential Smoothing"
2015-04-09 falsy Define Truthy and Falsy Values
2015-04-09 groupRemMap Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty
2015-04-09 haven Import SPSS, Stata and SAS Files
2015-04-09 isa2 The Iterative Signature Algorithm
2015-04-09 reader Suite of Functions to Flexibly Read Data from Files
2015-04-08 CIDnetworks Generative Models for Complex Networks with Conditionally Independent Dyadic Structure
2015-04-08 ClickClust Model-Based Clustering of Categorical Sequences
2015-04-08 corHMM Analysis of Binary Character Evolution
2015-04-08 cqrReg Quantile, Composite Quantile Regression and Regularized Versions
2015-04-08 nanop Tools for Nanoparticle Simulation and Calculation of PDF and Total Scattering Structure Function
2015-04-08 NCmisc Miscellaneous Functions for Creating Adaptive Functions and Scripts
2015-04-08 pendensity Density Estimation with a Penalized Mixture Approach
2015-04-08 PhyloMeasures Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures
2015-04-08 rSPACE Spatially-Explicit Power Analysis for Conservation and Ecology
2015-04-08 RxnSim Functions to Compute Chemical Reaction Similarity
2015-04-08 searchable Tools for Custom Searches / Subsets / Slices of Named R Objects
2015-04-08 softImpute Matrix Completion via Iterative Soft-Thresholded SVD
2015-04-08 TriMatch Propensity Score Matching of Non-Binary Treatments
2015-04-08 TSPred Functions for Baseline-Based Time Series Prediction
2015-04-07 BGLR Bayesian Generalized Linear Regression
2015-04-07 Formula Extended Model Formulas
2015-04-07 gProfileR Interface to the 'g:Profiler' Toolkit
2015-04-07 lpSolve Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
2015-04-07 network Classes for Relational Data
2015-04-07 pssm Piecewise Exponential Model for Time to Progression and Time from Progression to Death
2015-04-07 R2OpenBUGS Running OpenBUGS from R
2015-04-07 rstudioapi Safely Access the RStudio API
2015-04-07 StereoMorph Stereo Camera Calibration and Reconstruction
2015-04-06 BBEST Bayesian Estimation of Incoherent Neutron Scattering Backgrounds
2015-04-06 lavaan Latent Variable Analysis
2015-04-06 ngramrr A Simple General Purpose N-Gram Tokenizer
2015-04-06 repfdr Replicability Analysis for Multiple Studies of High Dimension
2015-04-05 mvngGrAd Moving Grid Adjustment in Plant Breeding Field Trials
2015-04-05 RcppRoll Efficient Rolling / Windowed Operations
2015-04-04 EFDR Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images
2015-04-04 ISOcodes Selected ISO Codes
2015-04-04 MixAll Clustering using Mixture Models
2015-04-04 pitchRx Tools for Harnessing MLBAM Gameday Data and Visualizing PITCHf/x
2015-04-04 SOUP Stochastic Ordering Using Permutations (and Pairwise Comparisons)
2015-04-04 timeseriesdb Manage Time Series with R and PostgreSQL
2015-04-03 EcoSimR Null Model Analysis for Ecological Data
2015-04-03 hgm Holonomic Gradient Method and Gradient Descent
2015-04-03 ODMconverter Tools to Convert ODM Files
2015-04-03 relSim Relative Simulator
2015-04-03 RKEA R/KEA Interface
2015-04-03 RKEAjars R/KEA Interface Jars
2015-04-03 thsls Three-Stage Least Squares Estimation for Systems of Simultaneous Equations
2015-04-02 Bmix Bayesian Sampling for Stick-Breaking Mixtures
2015-04-02 DiffCorr Analyzing and Visualizing Differential Correlation Networks in Biological Data
2015-04-02 geoBayes Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods
2015-04-02 GPfit Gaussian Processes Modeling
2015-04-02 HighDimOut Outlier Detection Algorithms for High-Dimensional Data
2015-04-02 maptpx MAP Estimation of Topic Models
2015-04-02 MCMC4Extremes Posterior Distribution of Extreme Value Models in R
2015-04-02 mra Analysis of Mark-Recapture Data
2015-04-02 mutoss Unified Multiple Testing Procedures
2015-04-02 PermAlgo Permutational Algorithm to Simulate Survival Data
2015-04-02 Rarity Calculation of Rarity Indices for Species and Assemblages of Species
2015-04-02 sybilccFBA Cost Constrained FLux Balance Analysis: MetabOlic Modeling with ENzyme kineTics (MOMENT)
2015-04-01 FlexParamCurve Tools to Fit Flexible Parametric Curves
2015-04-01 gazepath Gazepath Transforms Eye-Tracking Data into Fixations and Saccades
2015-04-01 GenOrd Simulation of Ordinal and Discrete Variables with Given Correlation Matrix and Marginal Distributions
2015-04-01 HarmonicRegression Harmonic Regression to One or more Time Series
2015-04-01 KMDA Kernel-Based Metabolite Differential Analysis
2015-04-01 Laterality Functions to Calculate Common Laterality Statistics in Primatology
2015-04-01 rivr Steady and Unsteady Open-Channel Flow Computation
2015-04-01 scidb An R Interface to SciDB
2015-04-01 TimeWarp Date Calculations and Manipulation
2015-04-01 track Store Objects on Disk Automatically
2015-03-31 bayesGDS Scalable Rejection Sampling for Bayesian Hierarchical Models
2015-03-31 CARBayesdata Data Sets Used in the Vignette Accompanying the CARBayes Package
2015-03-31 DatABEL File-Based Access to Large Matrices Stored on HDD in Binary Format
2015-03-31 episensr Basic Sensitivity Analysis of Epidemiological Results
2015-03-31 GenSA Functions for Generalized Simulated Annealing
2015-03-31 gvc Global Value Chains Tools
2015-03-31 longclust Model-Based Clustering and Classification for Longitudinal Data
2015-03-31 MatchingFrontier Computation of the Balance - Sample Size Frontier in Matching Methods for Causal Inference
2015-03-31 MethComp Functions for Analysis of Agreement in Method Comparison Studies
2015-03-31 MIICD Data Augmentation and Multiple Imputation for Interval Censored Data
2015-03-31 orthogonalsplinebasis Orthogonal B-Spline Basis Functions
2015-03-31 questionr Functions to Make Surveys Processing Easier
2015-03-31 RLumShiny 'Shiny' Applications for the R Package 'Luminescence'
2015-03-31 Rmonkey A Survey Monkey R Client
2015-03-31 shinyBS Twitter Bootstrap Components for Shiny
2015-03-30 Ake Associated Kernel Estimations
2015-03-30 ConSpline Partial Linear Least-Squares Regression using Constrained Splines
2015-03-30 ecoengine Programmatic Interface to the API Serving UC Berkeley's Natural History Data
2015-03-30 FeatureHashing Creates a Model Matrix via Feature Hashing with a Formula Interface
2015-03-30 glinternet Learning Interactions via Hierarchical Group-Lasso Regularization
2015-03-30 RIGHT R Interactive Graphics via HTML
2015-03-30 servr A Simple HTTP Server to Serve Static Files or Dynamic Documents
2015-03-30 statmod Statistical Modeling
2015-03-30 TFDEA Technology Forecasting using DEA (Data Envelopment Analysis)
2015-03-30 VdgRsm Plots of Scaled Prediction Variances for Response Surface Designs
2015-03-29 ggRandomForests Visually Exploring Random Forests
2015-03-29 mime Map Filenames to MIME Types
2015-03-29 MonetDB.R Connect MonetDB to R
2015-03-29 pscl Political Science Computational Laboratory, Stanford University
2015-03-29 Rd2roxygen Convert Rd to Roxygen Documentation
2015-03-29 snht Standard Normal Homogeneity Test
2015-03-28 SOMbrero SOM Bound to Realize Euclidean and Relational Outputs
2015-03-28 spgs Statistical Patterns in Genomic Sequences
2015-03-27 AutoSEARCH General-to-Specific (GETS) Modelling
2015-03-27 eurostat Tools for Eurostat Open Data
2015-03-27 fanc Penalized Likelihood Factor Analysis via Nonconvex Penalty
2015-03-27 gdm Functions for Generalized Dissimilarity Modeling
2015-03-27 HiDimDA High Dimensional Discriminant Analysis
2015-03-27 LPStimeSeries Learned Pattern Similarity and Representation for Time Series
2015-03-27 miniCRAN Create a Mini Version of CRAN Containing Only Selected Packages
2015-03-27 PAFit Nonparametric Estimation of Preferential Attachment and Node Fitness in Temporal Complex Networks
2015-03-27 SAMUR Stochastic Augmentation of Matched Data Using Restriction Methods
2015-03-27 secrdesign Sampling Design for Spatially Explicit Capture-Recapture
2015-03-27 StatMeasures Easy Data Manipulation, Data Quality and Statistical Checks
2015-03-27 UNF Tools for Creating Universal Numeric Fingerprints for Data
2015-03-26 chopthin The Chopthin Resampler
2015-03-26 descomponer Seasonal Adjustment by Frequency Analysis
2015-03-26 KappaGUI GUI for Cohen's and Fleiss' Kappa
2015-03-26 kmodR K-Means with Simultaneous Outlier Detection
2015-03-26 quantspec Quantile-Based Spectral Analysis of Time Series
2015-03-26 ROCR Visualizing the Performance of Scoring Classifiers
2015-03-26 rr Statistical Methods for the Randomized Response Technique
2015-03-26 sandwich Robust Covariance Matrix Estimators
2015-03-26 shinyFiles A Server-Side File System Viewer For Shiny
2015-03-26 survsim Simulation of Simple and Complex Survival Data
2015-03-25 flexCWM Flexible Cluster-Weighted Modeling
2015-03-25 internetarchive An API Client for the Internet Archive
2015-03-25 investr Inverse Estimation/Calibration Functions
2015-03-25 kohonen Supervised and Unsupervised Self-Organising Maps
2015-03-25 pheno2geno High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains
2015-03-25 radiant Business Analytics using R and Shiny
2015-03-25 timeROC Time-Dependent ROC Curve and AUC for Censored Survival Data
2015-03-25 tumblR Access to Tumblr v2 API
2015-03-25 vines Multivariate Dependence Modeling with Vines
2015-03-24 FAwR Functions and Datasets for "Forest Analytics with R"
2015-03-24 goft Tests of Fit for some Probability Distributions
2015-03-24 mapfit A Tool for PH/MAP Parameter Estimation
2015-03-24 rgexf Build, Import and Export GEXF Graph Files
2015-03-24 RoughSets Data Analysis Using Rough Set and Fuzzy Rough Set Theories
2015-03-24 rtable Tabular Reporting Functions
2015-03-24 trend Non-Parametric Trend Tests and Change-Point Detection
2015-03-23 BAMMtools Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
2015-03-23 Copula.Markov Estimation and Statistical Process Control Under Copula-Based Time Series Models
2015-03-23 measuRing Detection and Control of Tree-Ring Widths on Scanned Image Sections
2015-03-23 mht Multiple Hypothesis Testing for Variable Selection in High-Dimensional Linear Models
2015-03-23 NPBayesImpute Non-Parametric Bayesian Multiple Imputation for Categorical Data
2015-03-23 OutbreakTools Basic Tools for the Analysis of Disease Outbreaks
2015-03-23 RSA Response Surface Analysis
2015-03-23 rTableICC Random Generation of Contingency Tables
2015-03-23 waffle Create Waffle Chart Visualizations in R
2015-03-22 Coxnet Regularized Cox Model
2015-03-22 MCS Model Confidence Set Procedure
2015-03-22 psd Adaptive, Sine-Multitaper Power Spectral Density Estimation
2015-03-22 TR8 A Tool for Downloading Functional Traits Data for Plant Species
2015-03-21 mRMRe R package for parallelized mRMR ensemble feature selection
2015-03-20 alphahull Generalization of the Convex Hull of a Sample of Points in the Plane
2015-03-20 BayesFactor Computation of Bayes Factors for Common Designs
2015-03-20 DDD Diversity-Dependent Diversification
2015-03-20 flora Tools for Interacting with the Brazilian Flora Checklist
2015-03-20 GAR Authorize and Request Google Analytics Data
2015-03-20 hierDiversity Hierarchical Multiplicative Partitioning of Complex Phenotypes
2015-03-20 lambda.r Modeling Data with Functional Programming
2015-03-20 LMest Latent Markov Models with and without Covariates
2015-03-20 NanoStringNorm Normalize NanoString miRNA and mRNA Data
2015-03-20 PopED Population (and Individual) Optimal Experimental Design
2015-03-20 prais Prais-Winsten Estimation Procedure for AR(1) Serial Correlation
2015-03-20 randomizr Easy to Use Tools for Common Forms of Random Assignment
2015-03-20 SAVE Bayesian Emulation, Calibration and Validation of Computer Models
2015-03-20 simecol Simulation of Ecological (and Other) Dynamic Systems
2015-03-20 systemicrisk A Toolbox for Systemic Risk
2015-03-19 bisoreg Bayesian Isotonic Regression with Bernstein Polynomials
2015-03-19 eco Ecological Inference in 2x2 Tables
2015-03-19 mcmcplots Create Plots from MCMC Output
2015-03-19 NSM3 Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition
2015-03-19 rdrobust Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs
2015-03-19 rkt Mann-Kendall Test, Seasonal and Regional Kendall Tests
2015-03-18 BatchExperiments Statistical Experiments on Batch Computing Clusters
2015-03-18 BatchJobs Batch Computing with R
2015-03-18 CARLIT Ecological Quality Ratios Calculation and Plot
2015-03-18 fftwtools Wrapper for FFTW3: Includes 1-D, Univariate and Multivariate, and 2-D Transform
2015-03-18 jtrans Johnson Transformation for Normality
2015-03-18 robumeta Robust Variance Meta-Regression
2015-03-18 saccades Detection of Fixations in Eye-Tracking Data
2015-03-18 splancs Spatial and Space-Time Point Pattern Analysis
2015-03-17 atsd Support Querying Axibase Time-Series Database
2015-03-17 BGPhazard Markov Beta and Gamma Processes for Modeling Hazard Rates
2015-03-17 conting Bayesian Analysis of Contingency Tables
2015-03-17 DCluster Functions for the Detection of Spatial Clusters of Diseases
2015-03-17 gapminder Gapminder Data
2015-03-17 ggplot2 An Implementation of the Grammar of Graphics
2015-03-17 gmm Generalized Method of Moments and Generalized Empirical Likelihood
2015-03-17 histmdl A Most Informative Histogram-Like Model
2015-03-17 rsatscan Tools, Classes, and Methods for Interfacing with SaTScan Stand-Alone Software
2015-03-17 spdep Spatial Dependence: Weighting Schemes, Statistics and Models
2015-03-17 staTools Statistical Tools for Social Network Analysis
2015-03-17 vcrpart Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models
2015-03-17 VGAMdata Data Supporting the 'VGAM' Package
2015-03-16 genalg R Based Genetic Algorithm
2015-03-16 gvcm.cat Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs
2015-03-16 plotROC Generate Useful ROC Curve Charts for Print and Interactive Use
2015-03-16 PRISMA Protocol Inspection and State Machine Analysis
2015-03-16 ROCS Receiver Operating Characteristics Surface
2015-03-16 SIS Sure Independence Screening
2015-03-16 survRM2 Comparing Restricted Mean Survival Time
2015-03-16 zoo S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations)
2015-03-15 dismo Species Distribution Modeling
2015-03-15 jmetrik Tools for Interacting with 'jMetrik'
2015-03-15 metaMix Bayesian Mixture Analysis for Metagenomic Community Profiling
2015-03-15 NHPoisson Modelling and Validation of Non Homogeneous Poisson Processes
2015-03-15 rqPen Penalized Quantile Regression
2015-03-15 separationplot Separation Plots
2015-03-15 tab Functions for Creating Summary Tables for Statistical Reports
2015-03-15 TDboost A Boosted Tweedie Compound Poisson Model
2015-03-14 clusterSim Searching for Optimal Clustering Procedure for a Data Set
2015-03-14 pointRes Analyzing Pointer Years and Components of Resilience
2015-03-14 redcapAPI R Interface to REDCap
2015-03-14 scriptests Transcript-Based Unit Tests that are Easy to Create and Maintain
2015-03-14 symbolicDA Analysis of Symbolic Data
2015-03-13 abind Combine Multidimensional Arrays
2015-03-13 alm R Client for the Lagotto Altmetrics Platform
2015-03-13 betas Standardized Beta Coefficients
2015-03-13 bizdays Business Days Calculations and Utilities
2015-03-13 boottol Bootstrap Tolerance Levels for Credit Scoring Validation Statistics
2015-03-13 FAmle Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions
2015-03-13 funFEM Clustering in the Discriminative Functional Subspace
2015-03-13 Holidays Holiday and Half-Day Data, for Use with the 'TimeWarp' Package
2015-03-12 bayesLife Bayesian Projection of Life Expectancy
2015-03-12 cardidates Identification of Cardinal Dates in Ecological Time Series
2015-03-12 CFC Cause-Specific Framework for Competing-Risk Analysis
2015-03-12 FAdist Distributions that are Sometimes Used in Hydrology
2015-03-12 GWAF Genome-Wide Association/Interaction Analysis and Rare Variant Analysis with Family Data
2015-03-12 likeLTD Tools to Determine DNA Profile Evidence
2015-03-12 nparcomp Multiple Comparisons and Simultaneous Confidence Intervals
2015-03-12 qualV Qualitative Validation Methods
2015-03-11 blatr Send Emails Using 'Blat' for Windows
2015-03-11 colorspace Color Space Manipulation
2015-03-11 gbm Generalized Boosted Regression Models
2015-03-11 gems Generalized Multistate Simulation Model
2015-03-11 MCL Markov Cluster Algorithm
2015-03-11 multgee GEE Solver for Correlated Nominal or Ordinal Multinomial Responses
2015-03-11 multigroup Multigroup Data Analysis
2015-03-11 NORRRM Geochemical Toolkit for R
2015-03-11 seismicRoll Fast Rolling Functions for Seismology using Rcpp
2015-03-11 texmexseq Treatment Effect eXplorer for Microbial Ecology eXperiments (using Sequence Counts)
2015-03-10 bartMachine Bayesian Additive Regression Trees
2015-03-10 binr Cut Numeric Values into Evenly Distributed Groups
2015-03-10 cit Causal Inference Test
2015-03-10 DiceOptim Kriging-Based Optimization for Computer Experiments
2015-03-10 EIAdata R Wrapper for the Energy Information Administration (EIA) API
2015-03-10 eVenn A Powerful Tool to Quickly Compare Huge Lists and Draw Venn Diagrams
2015-03-10 forestplot Advanced Forest Plot Using 'grid' Graphics
2015-03-10 gsheet Download Google Sheets Using Just the URL
2015-03-10 lmfor Functions for Forest Biometrics
2015-03-10 mixture Mixture Models for Clustering and Classification
2015-03-10 orca Computation of Graphlet Orbit Counts in Sparse Graphs
2015-03-10 qgraph Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation
2015-03-10 relevent Relational Event Models
2015-03-10 RVFam Rare Variants Association Analyses with Family Data
2015-03-10 showtextdb Font Files for the 'showtext' Package
2015-03-10 vmsbase GUI Tools to Process, Analyze and Plot Fisheries Data
2015-03-09 C50 C5.0 Decision Trees and Rule-Based Models
2015-03-09 deldir Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
2015-03-09 desirability Desirability Function Optimization and Ranking
2015-03-09 DynNom A Dynamic Nomogram for Linear and Generalized Linear Models as Shiny Applications
2015-03-09 Familias Probabilities for Pedigrees Given DNA Data
2015-03-09 GetoptLong Parsing Command-Line Arguments and Variable Interpolation
2015-03-09 informR Sequence Statistics for Relational Event Models
2015-03-09 OUwie Analysis of Evolutionary Rates in an OU Framework
2015-03-09 SensusR Sensus Analytics
2015-03-09 SGCS Spatial Graph Based Clustering Summaries for Spatial Point Patterns
2015-03-08 csvread Fast Specialized CSV File Loader
2015-03-08 memisc Tools for Management of Survey Data, Graphics, Programming, Statistics, and Simulation
2015-03-08 netgsa Network-Based Gene Set Analysis
2015-03-07 ks Kernel Smoothing
2015-03-07 SID Structural Intervention Distance
2015-03-07 SimSeq Nonparametric Simulation of RNA-Seq Data
2015-03-07 tm.plugin.lexisnexis Import Articles from LexisNexis Using the tm Text Mining Framework
2015-03-06 alabama Constrained Nonlinear Optimization
2015-03-06 ecospat Spatial Ecology Miscellaneous Methods
2015-03-06 frailtypack General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction
2015-03-06 recluster Ordination Methods for the Analysis of Beta-Diversity Indices
2015-03-05 CAM Causal Additive Model (CAM)
2015-03-05 copula Multivariate Dependence with Copulas
2015-03-05 DAMOCLES Dynamic Assembly Model of Colonization, Local Extinction and Speciation
2015-03-05 gtop Game-Theoretically OPtimal (GTOP) Reconciliation Method
2015-03-05 hyperSpec Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)
2015-03-05 KOGMWU Functional Summary and Meta-Analysis of Gene Expression Data
2015-03-04 abf2 Load Gap-Free Axon ABF2 Files
2015-03-04 bootnet Bootstrap Methods for Various Network Estimation Routines
2015-03-04 clifro Easily Download and Visualise Climate Data from CliFlo
2015-03-04 Gmisc Descriptive Statistics, Transition Plots, and More
2015-03-04 krm Kernel Based Regression Models
2015-03-04 monreg Nonparametric Monotone Regression
2015-03-04 nCal Nonlinear Calibration
2015-03-04 Newdistns Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions
2015-03-04 OceanView Visualisation of Oceanographic Data and Model Output
2015-03-04 randomForestSRC Random Forests for Survival, Regression and Classification (RF-SRC)
2015-03-04 rclinicaltrials Download Aggregate Trial Information and Results from ClinicalTrials.gov
2015-03-04 Rcolombos Interface to Colombos Compendia using the Exposed REST API
2015-03-04 RISmed Download Content from NCBI Databases
2015-03-04 simctest Safe Implementation of Monte Carlo Tests
2015-03-03 BayesSummaryStatLM MCMC Sampling of Bayesian Linear Models via Summary Statistics
2015-03-03 bio3d Biological Structure Analysis
2015-03-03 BiSEp Toolkit to Identify Candidate Synthetic Lethality
2015-03-03 BOG Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions
2015-03-03 coalescentMCMC MCMC Algorithms for the Coalescent
2015-03-03 coda Output Analysis and Diagnostics for MCMC
2015-03-03 FieldSim Random Fields (and Bridges) Simulations
2015-03-03 hornpa Horn's (1965) Test to Determine the Number of Components/Factors
2015-03-03 JAGUAR Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map eQTL
2015-03-03 LPTime LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series Modelling
2015-03-03 NAPPA Performs the Processing and Normalisation of Nanostring miRNA and mRNA Data
2015-03-03 NSUM Network Scale Up Method
2015-03-03 pRF Permutation Significance for Random Forests
2015-03-03 RcmdrPlugin.EACSPIR Plugin de R-Commander para el Manual 'EACSPIR'
2015-03-03 rsnps Get SNP (Single-Nucleotide Polymorphism) Data on the Web
2015-03-03 Rssa A Collection of Methods for Singular Spectrum Analysis
2015-03-03 shinythemes Themes for Shiny
2015-03-03 simMSM Simulation of Event Histories for Multi-State Models
2015-03-03 stheoreme Klimontovich's S-Theorem Algorithm Implementation and Data Preparation Tools
2015-03-03 x.ent eXtraction of ENTity
2015-03-02 ggenealogy Visualization Tools for Genealogical Data
2015-03-02 IsingSampler Sampling Methods and Distribution Functions for the Ising Model
2015-03-02 lsr Companion to "Learning Statistics with R"
2015-03-02 PogromcyDanych PogromcyDanych / DataCrunchers is the Masive Online Open Course that Brings R and Statistics to the People
2015-03-02 RobPer Robust Periodogram and Periodicity Detection Methods
2015-03-01 BinNonNor Data Generation with Binary and Continuous Non-Normal Components
2015-03-01 Conake Continuous Associated Kernel Estimation
2015-03-01 emIRT EM Algorithms for Estimating Item Response Theory Models
2015-03-01 FinCovRegularization Covariance Matrix Estimation and Regularization for Finance
2015-03-01 gendata Generate and Modify Synthetic Datasets
2015-03-01 isingLenzMC Monte Carlo for Classical Ising Model
2015-03-01 PoisBinNonNor Data Generation with Poisson, Binary and Continuous Components
2015-03-01 PoisBinOrd Data Generation with Poisson, Binary and Ordinal Components
2015-03-01 XLConnect Excel Connector for R
2015-02-28 fields Tools for Spatial Data
2015-02-28 laketemps Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009
2015-02-28 R.oo R Object-Oriented Programming with or without References
2015-02-28 sidier Substitution and Indel Distances to Infer Evolutionary Relationships
2015-02-28 timma Target Inhibition Interaction using Maximization and Minimization Averaging
2015-02-28 wkb Convert Between Spatial Objects and Well-Known Binary (WKB) Geometry
2015-02-27 CoxRidge Cox Models with Dynamic Ridge Penalties
2015-02-27 DSsim Distance Sampling Simulations
2015-02-27 FindIt Finding Heterogeneous Treatment Effects
2015-02-27 GenForImp The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data
2015-02-27 lcmm Extended Mixed Models Using Latent Classes and Latent Processes
2015-02-27 mads Multi-Analysis Distance Sampling
2015-02-27 NormPsy Normalisation of Psychometric Tests
2015-02-26 CNVassoc Association Analysis of CNV Data and Imputed SNPs
2015-02-26 dplRCon Concordance for Dendroclimatology
2015-02-26 exact2x2 Exact Conditional Tests and Confidence Intervals for 2x2 tables
2015-02-26 FuzzyNumbers Tools to Deal with Fuzzy Numbers
2015-02-26 gte Generalized Turnbull's Estimator
2015-02-26 HardyWeinberg Graphical Tests for Hardy-Weinberg Equilibrium
2015-02-26 polyCub Cubature over Polygonal Domains
2015-02-26 PRROC Precision-Recall and ROC Curves for Weighted and Unweighted Data
2015-02-26 R2SWF Convert R Graphics to Flash Animations
2015-02-26 RcmdrPlugin.ROC Rcmdr Receiver Operator Characteristic Plug-In PACKAGE
2015-02-26 SurvCorr Correlation of Bivariate Survival Times
2015-02-25 aroma.apd A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]
2015-02-25 BoolNet Construction, Simulation and Analysis of Boolean Networks
2015-02-25 FGSG Feature Grouping and Selection Over an Undirected Graph
2015-02-25 GAabbreviate Abbreviating Questionnaires (or Other Measures) Using Genetic Algorithms
2015-02-25 ihs Inverse Hyperbolic Sine Distribution
2015-02-25 lgcp Log-Gaussian Cox Process
2015-02-25 momentchi2 Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables
2015-02-25 multiPIM Variable Importance Analysis with Population Intervention Models
2015-02-25 multitaper Multitaper Spectral Analysis Tools
2015-02-25 npmv Nonparametric Comparison of Multivariate Samples
2015-02-25 R.matlab Read and Write MAT Files and Call MATLAB from Within R
2015-02-25 SDD Serial Dependence Diagrams
2015-02-25 sgt Skewed Generalized T Distribution
2015-02-24 aroma.cn Copy-Number Analysis of Large Microarray Data Sets
2015-02-24 assist A Suite of R Functions Implementing Spline Smoothing Techniques
2015-02-24 autopls Partial Least Squares Regression with Backward Selection of Predictors
2015-02-24 babar Bayesian Bacterial Growth Curve Analysis in R
2015-02-24 cairoDevice Cairo-based Graphics Device Driver
2015-02-24 coloredICA Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis
2015-02-24 CombinS Construction Methods of some Series of PBIB Designs
2015-02-24 coxsei Fitting a CoxSEI Model
2015-02-24 FFD Freedom from Disease
2015-02-24 js Tools for Working with JavaScript in R
2015-02-24 likelihood Methods for Maximum Likelihood Estimation
2015-02-24 mwa Causal Inference in Spatiotemporal Event Data
2015-02-24 phenability Nonparametric Stability Analysis
2015-02-24 rasterVis Visualization Methods for Raster Data
2015-02-24 rfUtilities Random Forests Model Selection and Performance Evaluation
2015-02-24 spatialEco Spatial Analysis and Modeling
2015-02-24 speaq Tools for Nuclear Magnetic Resonance Spectrum Alignment and Quantitative Analysis
2015-02-24 SvyNom Nomograms for Right-Censored Outcomes from Survey Designs
2015-02-23 ACNE Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
2015-02-23 calmate Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
2015-02-23 crrstep Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model
2015-02-23 fitdistrplus Help to Fit of a Parametric Distribution to Non-Censored or Censored Data
2015-02-23 games Statistical Estimation of Game-Theoretic Models
2015-02-23 nephro Biostatistics Utilities for Nephrology
2015-02-23 PSCBS Analysis of Parent-Specific DNA Copy Numbers
2015-02-23 RcppAPT Rcpp Interface to the APT Package Manager
2015-02-23 spaMM Mixed Models, Particularly Spatial GLMMs
2015-02-23 stocks Fast Functions for Stock Market Analysis
2015-02-23 strataG Summaries and Population Structure Analyses of Haplotypic and Genotypic Data
2015-02-23 SurvLong Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates
2015-02-23 wahc Autocorrelation and Heteroskedasticity Correction in Fixed Effect Panel Data Model
2015-02-23 wmlf Wavelet Leaders in Multifractal Analysis
2015-02-22 AsynchLong Regression Analysis of Sparse Asynchronous Longitudinal Data
2015-02-22 FRESA.CAD FeatuRE Selection Algorithms for Computer Aided Diagnosis
2015-02-22 highTtest Simultaneous Critical Values for t-Tests in Very High Dimensions
2015-02-22 mapDK Maps of Denmark
2015-02-22 protoclust Hierarchical Clustering with Prototypes
2015-02-22 pvrank Rank Correlations
2015-02-22 R.devices Unified Handling of Graphics Devices
2015-02-22 RDota Data Analysis Toolbox for Dota2
2015-02-22 R.huge Methods for Accessing Huge Amounts of Data [deprecated]
2015-02-22 rpg Easy Interface to Advanced PostgreSQL Features
2015-02-22 SIMMS Subnetwork Integration for Multi-Modal Signatures
2015-02-22 ssize.fdr Sample Size Calculations for Microarray Experiments
2015-02-22 syuzhet Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
2015-02-22 TAQMNGR Manage Tick-by-Tick Transaction Data
2015-02-21 frm Regression Analysis of Fractional Responses
2015-02-21 frmhet Regression Analysis of Fractional Responses Under Unobserved Heterogeneity
2015-02-21 Grid2Polygons Convert Spatial Grids to Polygons
2015-02-21 lmeNBBayes Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model
2015-02-21 pacman Package Management Tool
2015-02-21 rlm Robust Fitting of Linear Model
2015-02-21 RSurvey Analysis of Spatially Distributed Data
2015-02-20 exactRankTests Exact Distributions for Rank and Permutation Tests
2015-02-20 faisalconjoint Faisal Conjoint Model: A New Approach to Conjoint Analysis
2015-02-20 fastpseudo Fast Pseudo Observations
2015-02-20 lodGWAS Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection
2015-02-20 msda Multi-Class Sparse Discriminant Analysis
2015-02-20 outbreaker Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2015-02-20 pullword R Interface to Pullword Service
2015-02-20 R.methodsS3 S3 Methods Simplified
2015-02-20 tseries Time Series Analysis and Computational Finance
2015-02-20 UBCRM Functions to Simulate and Conduct Dose-Escalation Phase I Studies
2015-02-20 WhopGenome High-Speed Processing of VCF, FASTA and Alignment Data
2015-02-19 bootstrap Functions for the Book "An Introduction to the Bootstrap"
2015-02-19 disparityfilter Disparity Filter Algorithm of Weighted Network
2015-02-19 ega Error Grid Analysis
2015-02-19 fgpt Floating Grid Permutation Technique
2015-02-19 npIntFactRep Nonparametric Interaction Tests for Factorial Designs with Repeated Measures
2015-02-19 partDSA Partitioning Using Deletion, Substitution, and Addition Moves
2015-02-19 precintcon Precipitation Intensity, Concentration and Anomaly Analysis
2015-02-19 R.rsp Dynamic Generation of Scientific Reports
2015-02-19 sharpshootR A Soil Survey Toolkit
2015-02-19 Simile Interact with Simile Models
2015-02-18 clues Clustering Method Based on Local Shrinking
2015-02-18 clusterGeneration Random Cluster Generation (with Specified Degree of Separation)
2015-02-18 frmpd Regression Analysis of Panel Fractional Responses
2015-02-18 lbfgsb3 Limited Memory BFGS Minimizer with Bounds on Parameters
2015-02-18 MortalitySmooth Smoothing and Forecasting Poisson Counts with P-Splines
2015-02-18 oaxaca Blinder-Oaxaca Decomposition
2015-02-18 PST Probabilistic Suffix Trees and Variable Length Markov Chains
2015-02-18 rjade A Clean, Whitespace-Sensitive Template Language for Writing HTML
2015-02-18 RNiftyReg Medical Image Registration Using the NiftyReg Library
2015-02-18 segmented Regression Models with Breakpoints/Changepoints Estimation
2015-02-18 semsfa Semiparametric Estimation of Stochastic Frontier Models
2015-02-17 analyz Model Layer for Automatic Data Analysis via CSV File Interpretation
2015-02-17 ATE Inference for Average Treatment Effects using Covariate Balancing
2015-02-17 eegkit Toolkit for Electroencephalography Data
2015-02-17 fastcluster Fast Hierarchical Clustering Routines for R and Python
2015-02-17 GaDiFPT First Passage Time Simulation for Gaussian Diffusion Processes
2015-02-17 gWidgets2RGtk2 Implementation of gWidgets2 for the RGtk2 Package
2015-02-17 hpcwld High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion
2015-02-17 IBDhaploRtools Functions for the Analysis of IBD Haplo Output
2015-02-17 IBDLabels Convert Between Different IBD-State Labelling Schemes
2015-02-17 linbin Binning and Plotting of Linearly Referenced Data
2015-02-17 multisensi Multivariate Sensitivity Analysis
2015-02-17 palaeoSig Significance Tests for Palaeoenvironmental Reconstructions
2015-02-17 Rlabkey Data Exchange Between R and LabKey Server
2015-02-17 Sleuth3 Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)"
2015-02-16 BANFF Bayesian Network Feature Finder
2015-02-16 bde Bounded Density Estimation
2015-02-16 FDboost Boosting Functional Regression Models
2015-02-16 fdrDiscreteNull False Discovery Rate Procedure Under Discrete Null Distributions
2015-02-16 glba General Linear Ballistic Accumulator Models
2015-02-16 HDPenReg High-Dimensional Penalized Regression
2015-02-16 LPS Linear Predictor Score, for Binary Inference from Multiple Continuous Variables
2015-02-16 PCIT Partial Correlation Coefficient with Information Theory
2015-02-16 phia Post-Hoc Interaction Analysis
2015-02-16 qrNLMM Quantile Regression for Nonlinear Mixed-Effects Models
2015-02-16 R4CouchDB An R Convenience Layer for CouchDB
2015-02-16 ramps Bayesian Geostatistical Modeling with RAMPS
2015-02-16 randomUniformForest Random Uniform Forests for Classification, Regression and Unsupervised Learning
2015-02-16 retistruct Retinal Reconstruction Program
2015-02-16 saeSim Simulation Tools for Small Area Estimation
2015-02-16 SCGLR Supervised Component Generalized Linear Regression
2015-02-16 sybilEFBA Using Gene Expression Data to Improve Flux Balance Analysis Predictions
2015-02-16 wbs Wild Binary Segmentation for Multiple Change-Point Detection
2015-02-15 MultiLCIRT Multidimensional Latent Class Item Response Theory Models
2015-02-15 nFCA Numerical Formal Concept Analysis for Systematic Clustering
2015-02-15 sapa Spectral Analysis for Physical Applications
2015-02-15 sparseBC Sparse Biclustering of Transposable Data
2015-02-15 ztable Zebra-Striped Tables in LaTeX and HTML Formats
2015-02-14 BayesBridge Bridge Regression
2015-02-14 minimist Parse Argument Options
2015-02-14 moonBook Functions and Datasets for the Book by Keon-Woong Moon
2015-02-14 phytotools Phytoplankton Production Tools
2015-02-14 Rborist Extensible, Parallelizable Implementation of the Random Forest Algorithm
2015-02-13 demi Differential Expression from Multiple Indicators
2015-02-13 eggCounts Hierarchical Modelling of Faecal Egg Counts
2015-02-13 plotGoogleMaps Plot Spatial or Spatio-Temporal Data Over Google Maps
2015-02-13 ROAuth R Interface For OAuth
2015-02-13 rockchalk Regression Estimation and Presentation
2015-02-13 shinyTree jsTree Bindings for Shiny
2015-02-13 tbart Teitz and Bart's p-Median Algorithm
2015-02-13 unittest TAP-Compliant Unit Testing
2015-02-12 estimability Estimability Tools for Linear Models
2015-02-12 FastKNN Fast k-Nearest Neighbors
2015-02-12 gaselect Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data
2015-02-12 kselection Selection of K in K-Means Clustering
2015-02-12 MTS All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models
2015-02-12 poplite Tools for Simplifying the Population and Querying of SQLite Databases
2015-02-12 RSNPset Efficient Score Statistics For Genome-Wide SNP Set Analysis
2015-02-12 sgof Multiple Hypothesis Testing
2015-02-12 SphericalK Spherical K-Function
2015-02-12 vows Voxelwise Semiparametrics
2015-02-11 ARPobservation Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes
2015-02-11 Ckmeans.1d.dp Optimal k-Means Clustering for One-Dimensional Data
2015-02-11 COMMUNAL Robust Selection of Cluster Number K
2015-02-11 condMVNorm Conditional Multivariate Normal Distribution
2015-02-11 DataCombine Tools for Easily Combining and Cleaning Data Sets
2015-02-11 gramEvol Grammatical Evolution for R
2015-02-11 presens R Interface for PreSens Fiber Optic Data
2015-02-11 rNMF Robust Nonnegative Matrix Factorization
2015-02-11 shinybootstrap2 Bootstrap 2 Web Components for Use with Shiny
2015-02-11 tmg Truncated Multivariate Gaussian Sampling
2015-02-11 treelet An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data
2015-02-11 tscount Analysis of Count Time Series
2015-02-10 asbio A Collection of Statistical Tools for Biologists
2015-02-10 cccp Cone Constrained Convex Problems
2015-02-10 cmvnorm The Complex Multivariate Gaussian Distribution
2015-02-10 graphscan Cluster Detection with Hypothesis Free Scan Statistic
2015-02-10 gridGraphics Redraw Base Graphics Using grid Graphics
2015-02-10 heritability Marker-Based Estimation of Heritability Using Individual Plant or Plot Data
2015-02-10 HSROC Meta-Analysis of Diagnostic Test Accuracy when Reference Test is Imperfect
2015-02-10 ICAFF Imperialist Competitive Algorithm
2015-02-10 kSamples K-Sample Rank Tests and their Combinations
2015-02-10 lmm Linear Mixed Models
2015-02-10 MSBVAR Markov-Switching, Bayesian, Vector Autoregression Models
2015-02-10 pan Multiple Imputation for Multivariate Panel or Clustered Data
2015-02-10 psbcGroup Penalized Semiparametric Bayesian Cox Models with Shrinkage and Grouping Priors
2015-02-10 RInSp R Individual Specialization (RInSp)
2015-02-10 SegCorr Detecting Correlated Genomic Regions
2015-02-10 SoftClustering Soft Clustering Algorithms
2015-02-10 tau Text Analysis Utilities
2015-02-10 treeclim Numerical Calibration of Proxy-Climate Relationships
2015-02-10 VNM Using V-algorithm and Newton-Raphson Method to Obtain Multiple-objective Optimal Design
2015-02-09 BradleyTerry2 Bradley-Terry Models
2015-02-09 DirichletReg Dirichlet Regression in R
2015-02-09 excursions Excursion Sets and Contour Credibility Regions for Random Fields
2015-02-09 ivpanel Instrumental Panel Data Models
2015-02-09 LARF Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects
2015-02-09 RPushbullet R Interface to the Pushbullet Messaging Service
2015-02-09 rtfbs Transcription Factor Binding Site Identification Tool
2015-02-09 snpEnrichment SNPs Enrichment Analysis
2015-02-08 cec2005benchmark Benchmark for the CEC 2005 Special Session on Real-Parameter Optimization
2015-02-08 MetNorm Statistical Methods for Normalizing Metabolomics Data
2015-02-08 RcppMLPACK Rcpp Integration for MLPACK Library
2015-02-08 SemiCompRisks Parametric and semi-parametric analysis of semi-competing risks data
2015-02-08 SVMMatch Causal Effect Estimation and Diagnostics with Support Vector Machines
2015-02-07 klausuR Multiple Choice Test Evaluation
2015-02-07 Sabermetrics Sabermetrics Functions For Baseball Analytics
2015-02-06 egcm Engle-Granger Cointegration Models
2015-02-06 FCMapper Fuzzy Cognitive Mapping
2015-02-06 knncat Nearest-neighbor Classification with Categorical Variables
2015-02-06 micromap Linked Micromap Plots
2015-02-06 multirich Calculate Multivariate Richness via UTC and sUTC
2015-02-06 ncdf Interface to Unidata netCDF Data Files
2015-02-06 PANICr PANIC Tests of Nonstationarity
2015-02-06 PoisNonNor Simultaneous Generation of Count and Continuous Data
2015-02-06 REPPlab R Interface to EPP-lab, a Java Program for Exploratory Projection Pursuit
2015-02-06 robustloggamma Robust estimation of the generalized log gamma model
2015-02-06 SimilarityMeasures Trajectory Similarity Measures
2015-02-06 sparseMVN Multivariate Normal Functions for Sparse Covariance and Precision Matrices
2015-02-06 TableMonster Table Monster
2015-02-06 textreg n-gram Text Regression, aka Concise Comparative Summarization
2015-02-06 varComp Variance Component Models
2015-02-05 BayesMed Default Bayesian Hypothesis Tests for Correlation, Partial Correlation, and Mediation
2015-02-05 ClueR CLUster Evaluation (CLUE)
2015-02-05 emplik2 Empirical Likelihood Ratio Test for Two Samples with Censored Data
2015-02-05 fdatest Interval Testing Procedure for Functional Data
2015-02-05 mada Meta-Analysis of Diagnostic Accuracy
2015-02-05 svKomodo SciViews GUI API - Functions to interface with Komodo Edit/IDE
2015-02-04 BLCOP Black-Litterman and Copula Opinion Pooling Frameworks
2015-02-04 catnet Categorical Bayesian Network Inference
2015-02-04 GeneticTools Collection of Genetic Data Analysis Tools
2015-02-04 kofnGA A Genetic Algorithm for Fixed-Size Subset Selection
2015-02-04 LiblineaR Linear Predictive Models Based on the LIBLINEAR C/C++ Library
2015-02-04 mfp Multivariable Fractional Polynomials
2015-02-04 miscFuncs Miscellaneous Useful Functions
2015-02-04 pamctdp Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns
2015-02-04 partialAR Partial Autoregression
2015-02-04 rebus Build Regular Expressions in a Human Readable Way
2015-02-04 rpart.plot Plot rpart Models. An Enhanced Version of plot.rpart
2015-02-04 sparseHessianFD Numerical Estimation of Sparse Hessians
2015-02-04 statcheck Extract Statistics from Articles and Recompute P Values
2015-02-04 Tides Quasi-Periodic Time Series Characteristics
2015-02-04 trustOptim Trust Region Optimization for Nonlinear Functions with Sparse Hessians
2015-02-03 AncestryMapper Assigning Ancestry Based on Population References
2015-02-03 BBmisc Miscellaneous Helper Functions for B. Bischl
2015-02-03 BinOrdNonNor Concurrent Generation of Binary, Ordinal and Continuous Data
2015-02-03 CEC Cross-Entropy Clustering
2015-02-03 DetMCD DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter)
2015-02-03 distrDoc Documentation for Packages distr, distrEx, distrSim, distrTEst, distrTeach, distrMod, and distrEllipse
2015-02-03 divo Tools for Analysis of Diversity and Similarity in Biological Systems
2015-02-03 gamlss.tr Generating and fitting truncated (gamlss.family) distributions
2015-02-03 gamlss.util GAMLSS Utilities
2015-02-03 llama Leveraging Learning to Automatically Manage Algorithms
2015-02-03 MatrixEQTL Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
2015-02-03 ParamHelpers Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning
2015-02-03 poisDoubleSamp Confidence Intervals with Poisson Double Sampling
2015-02-03 qvcalc Quasi Variances for Factor Effects in Statistical Models
2015-02-03 RcmdrPlugin.survival R Commander Plug-in for the survival Package
2015-02-03 relimp Relative Contribution of Effects in a Regression Model
2015-02-03 RPPairwiseDesign Resolvable partially pairwise balanced design and Space-filling design via association scheme
2015-02-02 lmeNB Compute the Personalized Activity Index Based on a Negative Binomial Model
2015-02-02 lmom L-moments
2015-02-02 lmomRFA Regional frequency analysis using L-moments
2015-02-02 multicon Multivariate Constructs
2015-02-02 royston Royston's H Test: Multivariate Normality Test
2015-02-02 Rsampletrees Sampletrees Input/Output Processing
2015-02-02 SETPath Spiked Eigenvalue Test for Pathway data
2015-02-02 tripEstimation Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes
2015-02-02 twang Toolkit for Weighting and Analysis of Nonequivalent Groups
2015-02-01 birk MA Birk's Functions
2015-02-01 CompRandFld Composite-Likelihood Based Analysis of Random Fields
2015-02-01 DFIT Differential Functioning of Items and Tests
2015-02-01 GWmodel Geographically-Weighted Models
2015-02-01 hbm Hierarchical Block Matrix Analysis
2015-01-31 BayesCR Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions
2015-01-31 d3Network Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R
2015-01-31 infra An Infrastructure Proxy Function
2015-01-31 LMERConvenienceFunctions Model Selection and Post-hoc Analysis for (G)LMER Models
2015-01-31 multiAssetOptions Finite Difference Method for Multi-Asset Option Valuation
2015-01-31 opencpu A System for Embedded Scientific Computing and Reproducible Research with R
2015-01-31 RcppStreams Rcpp Integration of the Streamulus DSEL for Stream Processing
2015-01-30 brewdata Extracting Usable Data from the Grad Cafe Results Search
2015-01-30 copBasic General Copula Theory and Many Utility Functions
2015-01-30 kissmig a Keep It Simple Species Migration Model
2015-01-30 mvoutlier Multivariate outlier detection based on robust methods
2015-01-30 ppmlasso Point Process Models with LASSO Penalties
2015-01-30 SmarterPoland Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl
2015-01-29 cchs Cox Model for Case-Cohort Data with Stratified Subcohort-Selection
2015-01-29 devEMF EMF Graphics Output Device
2015-01-29 mousetrack Mouse-Tracking Measures from Trajectory Data
2015-01-29 portfolio Analysing equity portfolios
2015-01-29 roughrf Roughened Random Forests for Binary Classification
2015-01-29 StatMatch Statistical Matching
2015-01-28 ald The Asymmetric Laplace Distribution
2015-01-28 compareC Compare Two Correlated C Indices with Right-censored Survival Outcome
2015-01-28 CpGassoc Association Between Methylation and a Phenotype of Interest
2015-01-28 fanplot Visualisation of Sequential Probability Distributions Using Fan Charts
2015-01-28 flower Tools for characterizing flowering traits
2015-01-28 kedd Kernel Estimator and Bandwidth Selection for Density and its Derivatives
2015-01-28 KFKSDS Kalman Filter, Smoother and Disturbance Smoother
2015-01-28 LaF Fast access to large ASCII files
2015-01-28 MarkowitzR Statistical Significance of the Markowitz Portfolio
2015-01-28 marmap Import, Plot and Analyze Bathymetric and Topographic Data
2015-01-28 metaMA Meta-analysis for MicroArrays
2015-01-28 rvalues R-values for Ranking in High-Dimensional Settings
2015-01-28 RWeka R/Weka interface
2015-01-28 RWekajars R/Weka interface jars
2015-01-28 SLHD Maximin-Distance (Sliced) Latin Hypercube Designs
2015-01-28 SMNCensReg Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions
2015-01-28 visualFields Statistical Methods for Visual Fields
2015-01-27 cope Coverage Probability Excursion (CoPE) Sets
2015-01-27 FeedbackTS Analysis of Feedback in Time Series
2015-01-27 geoCount Analysis and Modeling for Geostatistical Count Data
2015-01-27 gridSVG Export grid Graphics as SVG
2015-01-27 HMR Flux Estimation with Static Chamber Data
2015-01-27 MaxPro Maximum Projection Designs
2015-01-27 msarc Draw Diagrams (mis)Representing the Results of Mass Spec Experiments
2015-01-27 munfold Metric Unfolding
2015-01-27 mvnpermute Generate New Multivariate Normal Samples from Permutations
2015-01-27 PerMallows Permutations and Mallows Distributions
2015-01-27 qrLMM Quantile Regression for Linear Mixed-Effects Models
2015-01-27 quantification Quantification of Qualitative Survey Data
2015-01-27 RcmdrPlugin.SCDA Rcmdr Plugin for Designing and Analyzing Single-case Experiments
2015-01-27 reldist Relative Distribution Methods
2015-01-27 SCMA Single-Case Meta-Analysis
2015-01-27 SCRT Single-Case Randomization Tests
2015-01-27 SCVA Single-Case Visual Analysis
2015-01-27 sequenza Copy Number Estimation from Tumor Genome Sequencing Data
2015-01-27 spBayes Univariate and Multivariate Spatial-temporal Modeling
2015-01-27 tsoutliers Detection of Outliers in Time Series
2015-01-27 tufterhandout Tufte-style html document format for rmarkdown
2015-01-27 unmarked Models for Data from Unmarked Animals
2015-01-26 BayesVarSel Bayes Factors, Model Choice And Variable Selection In Linear Models
2015-01-26 Disake Discrete associated kernel estimators
2015-01-26 ltsk Local Time Space Kriging
2015-01-26 metaRNASeq Meta-analysis of RNA-seq data
2015-01-26 R2BayesX Estimate Structured Additive Regression Models with BayesX
2015-01-26 sae2 Small Area Estimation: Time-series Models
2015-01-26 simPop Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information
2015-01-26 stsm Structural Time Series Models
2015-01-25 RegressionFactory Expander Functions for Generating Full Gradient and Hessian from Single- and Multi-Slot Base Distributions
2015-01-25 spate Spatio-Temporal Modeling of Large Data Using a Spectral SPDE Approach
2015-01-25 wordnet WordNet Interface
2015-01-24 CensRegMod Fits Normal and Student-t Censored Regression Model
2015-01-24 simsalapar Tools for Simulation Studies in Parallel with R
2015-01-24 webutils Utility Functions for Web Applications
2015-01-23 blockcluster Coclustering package for binary, contingency, continuous and categorical data-sets
2015-01-23 grplasso Fitting user specified models with Group Lasso penalty
2015-01-23 hysteresis Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses
2015-01-23 LDAvis Interactive Visualization of Topic Models
2015-01-23 pbivnorm Vectorized Bivariate Normal CDF
2015-01-23 PBSmodelling GUI Tools Made Easy: Interact with Models and Explore Data
2015-01-23 remMap Regularized Multivariate Regression for Identifying Master Predictors
2015-01-23 timeDate Rmetrics - Chronological and Calendar Objects
2015-01-23 timeSeries Rmetrics - Financial Time Series Objects
2015-01-22 BcDiag Diagnostics plots for Bicluster Data
2015-01-22 cec2013 Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013
2015-01-22 ESEA ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis
2015-01-22 micromapST Linked Micromap Plots for U. S. States
2015-01-22 sig Print Function Signatures
2015-01-22 timeordered Time-ordered and time-aggregated network analyses
2015-01-22 TRD Transmission Ratio Distortion
2015-01-22 wesanderson A Wes Anderson Palette Generator
2015-01-21 ArfimaMLM Arfima-MLM Estimation For Repeated Cross-Sectional Data
2015-01-21 conformal Conformal Prediction for Regression and Classification
2015-01-21 coxphf Cox regression with Firth's penalized likelihood
2015-01-21 crank Completing Ranks
2015-01-21 D2C Predicting Causal Direction from Dependency Features
2015-01-21 drmdel Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples
2015-01-21 eventInterval Sequential Event Interval Analysis
2015-01-21 gammSlice Generalized additive mixed model analysis via slice sampling
2015-01-21 ggm Functions for graphical Markov models
2015-01-21 hht The Hilbert-Huang Transform: Tools and Methods
2015-01-21 loa Various Options and Add-ins for Lattice
2015-01-21 MenuCollection Collection of Configurable GTK+ Menus
2015-01-21 MODISTools MODIS Subsetting Tools
2015-01-21 RgoogleMaps Overlays on Google map tiles in R
2015-01-21 SemiParSampleSel Semiparametric Sample Selection Modelling with Continuous or Discrete Response
2015-01-21 sensR Thurstonian Models for Sensory Discrimination
2015-01-20 clinsig Clinical Significance Functions
2015-01-20 psychotools Infrastructure for Psychometric Modeling
2015-01-20 psychotree Recursive Partitioning Based on Psychometric Models
2015-01-20 snpRF Random Forest for SNPs to Prevent X-chromosome SNP Importance Bias
2015-01-19 gsw Gibbs Sea Water Functions
2015-01-19 imputeLCMD A collection of methods for left-censored missing data imputation
2015-01-19 INLABMA Bayesian Model Averaging with INLA
2015-01-19 mdatools Multivariate Data Analysis for Chemometrics
2015-01-18 hddtools Hydrological Data Discovery Tools
2015-01-18 survSNP Power Calculations for SNP Studies with Censored Outcomes
2015-01-17 flexmix Flexible Mixture Modeling
2015-01-17 HTMLUtils Facilitates Automated HTML Report Creation
2015-01-17 nontarget Detecting, Combining and Filtering Isotope, Adduct and Homologue Series Relations in High-Resolution Mass Spectrometry (HRMS) Data
2015-01-17 onls Orthogonal Nonlinear Least-Squares Regression
2015-01-17 rAverage Parameter estimation for the averaging model of Information Integration Theory
2015-01-16 AICcmodavg Model Selection and Multimodel Inference Based on (Q)AIC(c)
2015-01-16 anfis Adaptive Neuro Fuzzy Inference System in R
2015-01-16 batchmeans Consistent Batch Means Estimation of Monte Carlo Standard Errors
2015-01-16 caretEnsemble Ensembles of Caret Models
2015-01-16 chemometrics Multivariate Statistical Analysis in Chemometrics
2015-01-16 fwsim Fisher-Wright Population Simulation
2015-01-16 latdiag Draws diagrams useful for checking latent scales
2015-01-16 longpower Sample size calculations for longitudinal data
2015-01-16 ngspatial Fitting the centered autologistic and sparse spatial generalized linear mixed models for areal data
2015-01-16 OrdinalLogisticBiplot Biplot representations of ordinal variables
2015-01-16 pearson7 Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2
2015-01-16 sphet Estimation of spatial autoregressive models with and without heteroskedastic innovations
2015-01-15 bgeva Binary Generalized Extreme Value Additive Models
2015-01-15 bmrm Bundle Methods for Regularized Risk Minimization Package
2015-01-15 cmm Categorical Marginal Models
2015-01-15 COPASutils Tools for processing COPAS large-particle flow cytometer data
2015-01-15 EMP Expected Maximum Profit Classification Performance Measure
2015-01-15 mixer Random graph clustering
2015-01-15 MultiMeta Meta-analysis of Multivariate Genome Wide Association Studies
2015-01-14 ASPBay Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data
2015-01-14 exams Automatic Generation of Exams in R
2015-01-14 HiDimMaxStable Inference on High Dimensional Max-Stable Distributions
2015-01-14 mailR A Utility to Send Emails from R
2015-01-14 MRH Multi-Resolution Estimation of the Hazard Rate
2015-01-14 mztwinreg Regression Models for Monozygotic Twin Data
2015-01-14 prabclus Functions for Clustering of Presence-Absence, Abundance and Multilocus Genetic Data
2015-01-14 robustDA Robust Mixture Discriminant Analysis
2015-01-14 rphast Interface to PHAST Software for Comparative Genomics
2015-01-14 spnet Plotting (social) networks on maps
2015-01-14 SPODT Spatial Oblique Decision Tree
2015-01-14 stratigraph Toolkit for the plotting and analysis of stratigraphic and palaeontological data
2015-01-14 WCE Weighted Cumulative Exposure Models
2015-01-13 ads Spatial point patterns analysis
2015-01-13 bigrquery An Interface to Google's BigQuery API
2015-01-13 chromer Interface to Chromosome Counts Database API
2015-01-13 dst Using Dempster-Shafer Theory
2015-01-13 FACTscorer Scores the FACT and FACIT Family of Patient-Reported Outcome Measures
2015-01-13 fsia Import and Analysis of OMR Data from FormScanner
2015-01-13 HierO A graphical user interface for calculating power and sample size for hierarchical data
2015-01-13 hwwntest Tests of White Noise using Wavelets
2015-01-13 MBmca Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R
2015-01-13 PCPS Principal Coordinates of Phylogenetic Structure
2015-01-13 RCALI Calculation of the Integrated Flow of Particles between Polygons
2015-01-13 readMLData Reading Machine Learning Benchmark Data Sets in Different Formats
2015-01-13 Rttf2pt1 Package for ttf2pt1 program
2015-01-13 Sunder Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2015-01-13 traj Trajectory Analysis
2015-01-12 classyfire Robust multivariate classification using highly optimised SVM ensembles
2015-01-12 CNOGpro Copy Numbers of Genes in prokaryotes
2015-01-12 DEEPR Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test
2015-01-12 Geneland Detection of structure from multilocus genetic data
2015-01-12 HomoPolymer Theoretical Model to Simulate Radical Polymerization
2015-01-12 penMSM Estimating Regularized Multi-state Models Using L1 Penalties
2015-01-12 secrlinear Spatially Explicit Capture-Recapture for Linear Habitats
2015-01-12 stabs Stability Selection with Error Control
2015-01-11 leiv Bivariate Linear Errors-In-Variables Estimation
2015-01-11 neldermead R port of the Scilab neldermead module
2015-01-10 aoristic aoristic analysis with spatial output (kml)
2015-01-10 classInt Choose Univariate Class Intervals
2015-01-10 ctv CRAN Task Views
2015-01-10 eRm Extended Rasch Modeling
2015-01-10 hsphase Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
2015-01-10 MNM Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks
2015-01-10 neuRosim Functions to Generate fMRI Data Including Activated Data, Noise Data and Resting State Data
2015-01-10 QCA Qualitative Comparative Analysis
2015-01-10 RcppClassic Deprecated 'classic' Rcpp API
2015-01-10 RFmarkerDetector Multivariate Analysis of Metabolomics Data using Random Forests
2015-01-10 waveslim Basic wavelet routines for one-, two- and three-dimensional signal processing
2015-01-09 blockTools Block, Assign, and Diagnose Potential Interference in Randomized Experiments
2015-01-09 DEoptim Global Optimization by Differential Evolution
2015-01-09 FastRCS FastRCS Robust Fit of Multivariable Linear Regression Model
2015-01-09 LSD Lots of Superior Depictions
2015-01-09 pvar Calculation and Application of p-variation
2015-01-09 randomizationInference Flexible Randomization-Based Inference
2015-01-09 randomLCA Random Effects Latent Class Analysis
2015-01-09 RBPcurve The Residual-based Predictiveness Curve
2015-01-09 RcppProgress An Interruptible Progress Bar with OpenMP Support for C++ in R Packages
2015-01-09 textometry Textual Data Analysis Package used by the TXM Software
2015-01-08 brnn brnn (Bayesian regularization for feed-forward neural networks)
2015-01-08 epiR Tools for the Analysis of Epidemiological Data
2015-01-08 interferenceCI Exact Confidence Intervals in the Presence of Interference
2015-01-08 io A Unified Framework for Input-Output Operations in R
2015-01-08 noia Implementation of the Natural and Orthogonal InterAction (NOIA) model
2015-01-08 radir Inverse-Regression Estimation of Radioactive Doses
2015-01-08 ShrinkCovMat Shrinkage Covariance Matrix Estimators
2015-01-08 SimCorMultRes Simulates Correlated Multinomial Responses
2015-01-08 sra Selection Response Analysis
2015-01-07 BEQI2 Benthic Ecosystem Quality Index 2
2015-01-07 cudaBayesreg CUDA Parallel Implementation of a Bayesian Multilevel Model for fMRI Data Analysis
2015-01-07 eaf Plots of the Empirical Attainment Function
2015-01-07 FastPCS FastPCS Robust Fit of Multivariate Location and Scatter
2015-01-07 gdimap Generalized Diffusion Magnetic Resonance Imaging
2015-01-07 glpkAPI R Interface to C API of GLPK
2015-01-07 mwaved Multichannel Wavelet Deconvolution with Additive Long Memory Noise
2015-01-07 QCAtools Helper functions for QCA in R
2015-01-07 RGENERATEPREC Tools To Generate Daily-Precipitation Time Series
2015-01-07 tikzDevice R Graphics Output in LaTeX Format
2015-01-07 tsc Likelihood-ratio Tests for Two-Sample Comparisons
2015-01-06 catR Procedures to Generate Patterns under Computerized Adaptive Testing
2015-01-06 CEGO Combinatorial Efficient Global Optimization
2015-01-06 cobs COBS – COnstrained B-Splines (Sparse matrix based)
2015-01-06 DAMisc Dave Armstrong's Miscellaneous Functions
2015-01-06 gWidgets2tcltk Toolkit Implementation of gWidgets2 for tcltk
2015-01-06 medicalrisk Medical Risk and Comorbidity Tools for ICD-9-CM Data
2015-01-06 msm Multi-state Markov and Hidden Markov Models in Continuous Time
2015-01-06 physiology Calculate Physiological Characteristics of Adults and Children
2015-01-06 RcppCNPy Read-Write Support for NumPy Files via Rcpp
2015-01-05 CorrBin Nonparametrics with Clustered Binary and Multinomial Data
2015-01-05 DistributionUtils Distribution Utilities
2015-01-05 EnsembleBase Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling
2015-01-05 GeneralizedHyperbolic The Generalized Hyperbolic Distribution
2015-01-05 glarma Generalized Linear Autoregressive Moving Average Models
2015-01-05 hwriterPlus hwriterPlus: Extending the hwriter Package
2015-01-05 moments Moments, cumulants, skewness, kurtosis and related tests
2015-01-05 mritc MRI Tissue Classification
2015-01-05 NormalLaplace The Normal Laplace Distribution
2015-01-05 RadTran Radon and Soil Gas Transport in 2D Porous Medium
2015-01-05 RGENERATE Tools To Generate Vector Time Series
2015-01-05 SCEPtER Stellar CharactEristics Pisa Estimation gRid
2015-01-05 SkewHyperbolic The Skew Hyperbolic Student t-Distribution
2015-01-05 tframe Time Frame Coding Kernel
2015-01-05 TH.data TH's Data Archive
2015-01-05 VarianceGamma The Variance Gamma Distribution
2015-01-04 AnglerCreelSurveySimulation Simulate a Bus Route Creel Survey of Anglers
2015-01-04 EntropyEstimation Estimation of Entropy and Related Quantities
2015-01-04 intReg Interval Regression
2015-01-04 jiebaRD Chinese Text Segmentation Data for jiebaR Package
2015-01-04 REdaS Companion Package to the Book “R: Einführung durch angewandte Statistik”
2015-01-04 rUnemploymentData Data and Functions for USA State and County Unemployment Data
2015-01-04 swirl Learn R, in R
2015-01-04 ThreeArmedTrials Design and Analysis of Clinical Non-inferiority or Superiority Trials with Active and Placebo Control
2015-01-03 glcm Calculate textures from grey-level co-occurrence matrices (GLCMs) in R
2015-01-03 PivotalR A Fast, Easy-to-use Tool for Manipulating Tables in Databases and A Wrapper of MADlib
2015-01-02 dropR Analyze Drop Out of an Experiment or Survey
2015-01-02 ForImp Imputation of Missing Values Through a Forward Imputation Algorithm
2015-01-02 lazyeval Lazy (Non-Standard) Evaluation
2015-01-02 TreePar Estimating birth and death rates based on phylogenies
2015-01-01 EnsembleCV Extensible Package for Cross-Validation-Based Integration of Base Learners
2015-01-01 glrt Generalized Logrank Tests for Interval-censored Failure Time Data
2015-01-01 granovaGG Graphical Analysis of Variance Using ggplot2
2015-01-01 msBP Multiscale Bernstein Polynomials for Densities
2015-01-01 rvest Easily Harvest (Scrape) Web Pages
2015-01-01 Storm Write Storm Bolts in R using the Storm Multi-Language Protocol
2014-12-31 bibtex bibtex parser
2014-12-31 blsAPI Request Data From The U.S. Bureau of Labor Statistics API
2014-12-31 ca Simple, Multiple and Joint Correspondence Analysis
2014-12-31 cg The cg package to compare groups
2014-12-31 CNprep Pre-process DNA Copy Number (CN) Data for Detection of CN Events
2014-12-31 digest Create Cryptographic Hash Digests of R Objects
2014-12-31 digitalPCR Estimate copy number for digital PCR
2014-12-31 maxLik Maximum Likelihood Estimation
2014-12-31 Quor Quantile Ordering
2014-12-31 RAMP Regularized Generalized Linear Models with Interaction Effects
2014-12-31 spMC Continuous-Lag Spatial Markov Chains
2014-12-31 YaleToolkit Data exploration tools from Yale University
2014-12-30 BCDating Business Cycle Dating and Plotting Tools
2014-12-30 CORE Cores of Recurrent Events
2014-12-30 ParDNAcopy Parallel implementation of the "segment" function of package "DNAcopy"
2014-12-30 TBSSurvival Survival Analysis using a Transform-Both-Sides model
2014-12-29 countrycode Convert Country Names and Country Codes
2014-12-29 diffEq Functions from the book Solving Differential Equations in R
2014-12-29 dupiR Bayesian inference from count data using discrete uniform priors
2014-12-29 ecolMod "A practical guide to ecological modelling - using R as a simulation platform"
2014-12-29 metabolomics Analysis of Metabolomics Data
2014-12-29 R4CDISC Read CDISC Data Files
2014-12-29 raters A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables
2014-12-29 selectiongain A tool for calculation and optimization of the expected gain from multi-stage selection
2014-12-29 TBEST Tree Branches Evaluated Statistically for Tightness
2014-12-29 usl Analyze System Scalability with the Universal Scalability Law
2014-12-28 BNDataGenerator Data Generator based on Bayesian Network Model
2014-12-28 lm.beta Add Standardized Regression Coefficients to lm-Objects
2014-12-28 plfm Probabilistic Feature Analysis of Two-Way Two-Mode Frequencies
2014-12-28 rmngb Miscellaneous Collection of Functions for Medical Data Analysis
2014-12-28 rneos rneos: XML-RPC Interface to NEOS
2014-12-27 extraTrees Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression
2014-12-26 LIM Linear Inverse Model examples and solution methods
2014-12-26 NetIndices Estimating network indices, including trophic structure of foodwebs in R
2014-12-26 RConics Computations on Conics
2014-12-26 ReacTran Reactive transport modelling in 1D, 2D and 3D
2014-12-26 Statomica Statomica utility package
2014-12-24 additivityTests Additivity Tests in the Two Way Anova with Single Sub-class Numbers
2014-12-24 BayClone2 Bayesian Feature Allocation Model for Tumor Heterogeneity
2014-12-24 historydata Data Sets for Historians
2014-12-24 ismev An Introduction to Statistical Modeling of Extreme Values
2014-12-24 manipulate Interactive Plots for RStudio
2014-12-24 OutlierDM Outlier Detection for Multi-replicated High-throughput Data
2014-12-24 OutrankingTools Functions for Solving Multiple-criteria Decision-making Problems
2014-12-24 pbdSLAP Programming with Big Data – Scalable Linear Algebra Packages
2014-12-24 protr Generating Various Numerical Representation Schemes of Protein Sequence
2014-12-24 selectr Translate CSS Selectors to XPath Expressions
2014-12-24 USAboundaries Historical Boundaries of the United States of America, 1629-2000
2014-12-23 KrigInv Kriging-based Inversion for Deterministic and Noisy Computer Experiments
2014-12-23 StratSel Strategic Selection Estimator
2014-12-23 TDA Statistical Tools for Topological Data Analysis
2014-12-22 abn Data Modelling with Additive Bayesian Networks
2014-12-22 convevol Quantifies and assesses the significance of convergent evolution
2014-12-22 depmix Dependent Mixture Models
2014-12-22 diveRsity A Comprehensive, General Purpose Population Genetics Analysis Package
2014-12-22 gets General-to-Specific (GETS) Modelling and Indicator Saturation Methods
2014-12-22 graphicsQC Quality Control for Graphics in R
2014-12-22 hydrostats Hydrologic indices for daily time series data
2014-12-22 MAd Meta-Analysis with Mean Differences
2014-12-22 mhsmm Inference for Hidden Markov and Semi-Markov Models
2014-12-22 MPDiR Data sets and scripts for Modeling Psychophysical Data in R
2014-12-22 pvclust Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
2014-12-22 qdapTools Tools for the qdap Package
2014-12-21 adabag Applies Multiclass AdaBoost.M1, SAMME and Bagging
2014-12-21 aplore3 Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd ed.)
2014-12-21 breakpoint Multiple Break-Point Detection via the Cross-Entropy Method
2014-12-21 OPI Open Perimetry Interface
2014-12-21 PredictABEL Assessment of Risk Prediction Models
2014-12-21 qmrparser Parser combinator in R
2014-12-21 reports Assist the Workflow of Writing Academic Articles and Other Reports
2014-12-21 spfrontier Spatial Stochastic Frontier models estimation
2014-12-20 colourlovers R client for the COLOURlovers API
2014-12-20 doMPI Foreach parallel adaptor for the Rmpi package
2014-12-20 NORTARA Generation of Multivariate Data with Arbitrary Marginals
2014-12-20 orgR Analyse Text Files Created by Emacs' Org mode
2014-12-20 RMAWGEN Multi-site Auto-regressive Weather GENerator
2014-12-20 RPublica ProPublica API Client
2014-12-20 SCEPtERbinary Stellar CharactEristics Pisa Estimation gRid for Binary Systems
2014-12-20 splm Econometric Models for Spatial Panel Data
2014-12-20 svDialogs SciViews GUI API - Dialog boxes
2014-12-20 tcltk2 Tcl/Tk Additions
2014-12-20 testit A Simple Package for Testing R Packages
2014-12-19 bgmm Gaussian Mixture Modeling Algorithms And The Belief-based Mixture Modeling
2014-12-19 cghseg Segmentation methods for array CGH analysis
2014-12-19 geonames Interface to www.geonames.org web service
2014-12-19 lpme Local Polynomial Estimator in Measurement Error Models
2014-12-19 penalized L1 (lasso and fused lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model
2014-12-19 RJDBC Provides access to databases through the JDBC interface
2014-12-19 sBF Smooth Backfitting
2014-12-19 spanr Search Partition Analysis
2014-12-19 spBayesSurv Bayesian Modeling and Analysis of Spatially Correlated Survival Data
2014-12-19 srd Draws Scaled Rectangle Diagrams
2014-12-18 crs Categorical Regression Splines
2014-12-18 DCGL Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data
2014-12-18 GPC Generalized Polynomial Chaos
2014-12-18 multiband Period Estimation for Multiple Bands
2014-12-18 RnavGraph Using Graphs as a Navigational Infrastructure
2014-12-18 RoughSetKnowledgeReduction Simplification of Decision Tables using Rough Sets
2014-12-18 selfingTree Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing
2014-12-18 sprinter Framework for Screening Prognostic Interactions
2014-12-17 amap Another Multidimensional Analysis Package
2014-12-17 db.r A Database Exploration Tool with Assisted Querying and Schema Exploration
2014-12-17 EasyABC Efficient Approximate Bayesian Computation Sampling Schemes
2014-12-17 FPDclustering PD-Clustering and Factor PD-Clustering
2014-12-17 hexView Viewing Binary Files
2014-12-17 lmmot Multiple Ordinal Tobit (MOT) model
2014-12-17 lqmm Linear Quantile Mixed Models
2014-12-17 nullabor Tools for Graphical Inference
2014-12-17 plotpc Plot principal component histograms around a scatter plot
2014-12-17 plsRbeta Partial Least Squares Regression for Beta Regression Models
2014-12-17 plsRcox Partial Least Squares Regression for Cox Models and Related Techniques
2014-12-17 plsRglm Partial Least Squares Regression for Generalized Linear Models
2014-12-17 RcppDL Deep Learning Methods via Rcpp
2014-12-17 refset Subsets with Reference Semantics
2014-12-17 rmatio Read and Write Matlab Files
2014-12-17 rSFA Slow Feature Analysis in R
2014-12-17 seqinr Biological Sequences Retrieval and Analysis
2014-12-17 soil.spec Soil Spectroscopy Tools and Reference Models
2014-12-17 stpp Space-Time Point Pattern simulation, visualisation and analysis
2014-12-16 dti Analysis of diffusion weighted imaging (DWI) data
2014-12-16 epinet A Collection of Epidemic/Network-Related Tools
2014-12-16 fda Functional Data Analysis
2014-12-16 FinancialInstrument Financial Instrument Model Infrastructure for R
2014-12-16 gimme Group Iterative Multiple Model Estimation
2014-12-16 GrammR Graphical Representation and Modeling of Metagenomic Reads
2014-12-16 leaderCluster Leader Clustering Algorithm
2014-12-16 PHeval Evaluation of the proportional hazards assumption with a standardized score process
2014-12-16 readBrukerFlexData Reads Mass Spectrometry Data in Bruker *flex Format
2014-12-16 RECA Relevant Component Analysis for Supervised Distance Metric Learning
2014-12-16 rotations Tools for Working with Rotation Data
2014-12-16 sdnet Soft Discretization-based Bayesian Network Inference
2014-12-16 season Seasonal analysis of health data
2014-12-16 spca Sparse Principal Component Analysis
2014-12-16 WaveletComp Computational Wavelet Analysis
2014-12-15 Taxonstand Taxonomic Standardization of Plant Species Names
2014-12-15 wildlifeDI Calculate Indices of Dynamic Interaction for Wildlife Telemetry Data
2014-12-15 xkcd Plotting ggplot2 graphics in an XKCD style
2014-12-14 EBglmnet Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models
2014-12-14 logconPH CoxPH Model with Log Concave Baseline Distribution
2014-12-14 rodd Optimal Discriminating Designs
2014-12-14 varSelRF Variable Selection using Random Forests
2014-12-13 blowtorch Constrained Optimization Via Stochastic Gradient Descent
2014-12-13 rgpui UI for the RGP genetic programming framework
2014-12-13 Rmosek The R-to-MOSEK Optimization Interface
2014-12-13 Vdgraph Variance dispersion graphs and Fraction of design space plots for response surface designs
2014-12-12 DPw Semi- and nonparametric Bayesian Subset Selection Procedures
2014-12-12 DSpat Spatial Modelling for Distance Sampling Data
2014-12-12 rnbn Access NBN Data
2014-12-12 subrank Computes copula using ranks and subsampling
2014-12-11 c060 Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models
2014-12-11 doBy Groupwise statistics, LSmeans, linear contrasts, utilities
2014-12-11 optparse Command line option parser
2014-12-11 phreeqc R interface to Geochemical Modeling Software
2014-12-11 TIMP Fitting Separable Nonlinear Models in Spectroscopy and Microscopy
2014-12-10 biomod2 Ensemble platform for species distribution modeling
2014-12-10 bnormnlr Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models
2014-12-10 dbstats Distance-Based Statistics
2014-12-10 DnE Distribution and Equation
2014-12-10 filenamer Easy Management of File Names
2014-12-10 gsalib Utility Functions For GATK
2014-12-10 pawacc Physical activity with accelerometers
2014-12-10 prodlim Product-limit estimation for censored event history analysis
2014-12-10 riskRegression Risk regression models for survival analysis with competing risks
2014-12-10 snplist Tools to create Gene Sets
2014-12-10 spiders Fits predator preferences model
2014-12-10 sprm Sparse and Non-Sparse Partial Robust M Regression
2014-12-10 TPmsm Estimation of Transition Probabilities in Multistate Models
2014-12-10 vitality Fitting Routines for the Vitality Family of Mortality Models
2014-12-09 apcluster Affinity Propagation Clustering
2014-12-09 complmrob Robust Linear Regression with Compositional Data as Covariates
2014-12-09 Cprob Conditional probability function of a competing event
2014-12-09 cvAUC Cross-Validated Area Under the ROC Curve Confidence Intervals
2014-12-09 etm Empirical Transition Matrix
2014-12-09 GeneticSubsetter Identify Favorable Subsets of Germplasm Collections
2014-12-09 growfunctions Bayesian non-parametric dependent models for time-indexed functional data
2014-12-09 iFes Incremental Feature Selection Algorithm accelerated by GPU
2014-12-09 isopam Isopam (Clustering)
2014-12-09 localgauss Estimating Local Gaussian Parameters
2014-12-09 MRSP Multinomial Response Models with Structured Penalties
2014-12-09 normalp Routines for Exponential Power Distribution
2014-12-09 RDataCanvas Basic Runtime Support for Datacanvas.io
2014-12-09 rzmq R Bindings for ZeroMQ
2014-12-09 spgwr Geographically weighted regression
2014-12-08 bdynsys Bayesian Dynamical System Model
2014-12-08 BerlinData Easy access to Berlin related data
2014-12-08 breakage SICM pipette tip geometry estimation
2014-12-08 ccda Combined Cluster and Discriminant Analysis
2014-12-08 extrafont Tools for using fonts
2014-12-08 fSRM Social Relations Analyses With Roles ("Family SRM")
2014-12-08 iC10 A copy number and expression-based classifier for breast tumours
2014-12-08 MetSizeR GUI Tool for Estimating Sample Sizes for Metabolomic Experiments
2014-12-08 optiRum Miscellaneous functions for (primarily) finance / credit risk analysts
2014-12-08 rbounds Perform Rosenbaum bounds sensitivity tests for matched and unmatched data
2014-12-08 rJPSGCS R-interface to Gene Drop Simulation from JPSGCS
2014-12-08 RSurveillance Design and Analysis of Disease Surveillance Activities
2014-12-08 SPmlficmcm Semiparametric Maximum Likelihood for Mother-Child Designs
2014-12-08 tgp Bayesian treed Gaussian process models
2014-12-07 BayesianAnimalTracker Bayesian Melding of GPS and DR Path for Animal Tracking
2014-12-07 Boruta Wrapper Algorithm for All-Relevant Feature Selection
2014-12-07 dashboard Interactive Data Visualization with D3.js
2014-12-07 metasens Advanced Statistical Methods to Model and Adjust for Bias in Meta-Analysis
2014-12-07 networkDynamic Dynamic Extensions for Network Objects
2014-12-07 RColorBrewer ColorBrewer Palettes
2014-12-07 rtdists Response time distributions
2014-12-07 tempdisagg Methods for Temporal Disaggregation and Interpolation of Time Series
2014-12-06 agrmt Calculate Agreement or Consensus in Ordered Rating Scales
2014-12-06 algstat Algebraic statistics in R
2014-12-06 chngpt Change Point Logistic Regression
2014-12-06 CITAN CITation ANalysis Toolpack
2014-12-06 NISTunits Fundamental Physical Constants and Unit Conversions from NIST
2014-12-06 Rcgmin Conjugate Gradient Minimization of Nonlinear Functions
2014-12-06 reshape2 Flexibly Reshape Data: A Reboot of the Reshape Package
2014-12-06 Rvmmin Variable Metric Nonlinear Function Minimization
2014-12-05 acid Analysing Conditional Distributions of Income
2014-12-05 ars Adaptive Rejection Sampling
2014-12-05 BLR Bayesian Linear Regression
2014-12-05 gettingtothebottom Learning Optimization and Machine Learning for Statistics
2014-12-05 nlmrt Functions for Nonlinear Least Squares Solutions
2014-12-05 okmesonet Retrieve Oklahoma Mesonet climatological data
2014-12-05 optextras Tools to Support Optimization Methods
2014-12-05 PCAmixdata Multivariate Analysis of Mixed Data
2014-12-05 pec Prediction Error Curves for risk prediction models in survival analysis
2014-12-05 popReconstruct Reconstruct Human Populations of the Recent Past
2014-12-05 robfilter Robust Time Series Filters
2014-12-05 tidyr Easily Tidy Data with spread() and gather() Functions
2014-12-05 tlm Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables
2014-12-05 tourr Implement Tour Methods in R Code
2014-12-04 BEDASSLE Quantifies effects of geo/eco distance on genetic differentiation
2014-12-04 BoomSpikeSlab MCMC for Spike and Slab Regression
2014-12-04 extWeibQuant Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture
2014-12-04 gmailr Access the Gmail RESTful API
2014-12-04 HGNChelper Handy Functions for Working With HGNC Gene Symbols and Affymetrix Probeset Identifiers
2014-12-04 HSSVD Biclustering with Heterogeneous Variance
2014-12-04 LeafAngle Analysis and Visualization of Plant Leaf Angle Distributions
2014-12-04 MasterBayes ML and MCMC Methods for Pedigree Reconstruction and Analysis
2014-12-04 nonnest2 Tests of Non-nested Models
2014-12-04 NPS Convenience Functions and Tests for Working With the Net Promoter Score (NPS)
2014-12-04 rAltmetric Retrieves Altmerics Data For Any Published Paper From Altmetric.com
2014-12-04 RStars Access to the Digital Universe Data set API
2014-12-04 sensitivityPStrat Principal Stratification Sensitivity Analysis Functions
2014-12-04 spcr Sparse principal component regression
2014-12-04 stratification Univariate Stratification of Survey Populations
2014-12-03 Boom Bayesian Object Oriented Modeling
2014-12-03 deTestSet Testset for differential equations
2014-12-03 genMOSS Functions for the Bayesian Analysis of GWAS Data
2014-12-03 panelaggregation Aggregate Longitudinal Survey Data
2014-12-03 rngSetSeed Seeding the Default RNG with a Numeric Vector
2014-12-03 sequences Generic and Biological Sequences
2014-12-03 YplantQMC Plant Architectural Analysis with Yplant and QuasiMC
2014-12-02 choroplethrAdmin1 Contains an Administrative-Level-1 Map of the World
2014-12-02 DOBAD Analysis of Discretely Observed linear Birth-And-Death(-and-immigration) Markov Chains
2014-12-02 FLIM Farewell’s Linear Increments Model
2014-12-02 gamboostMSM Estimating multistate models using gamboost()
2014-12-02 GGally Extension to ggplot2
2014-12-02 hnp Half-Normal Plots with Simulation Envelopes
2014-12-02 MOrder Check Time Homogeneity and Markov Chain Order
2014-12-02 MPSEM Modeling Phylogenetic Signals using Eigenvector Maps
2014-12-02 plgp Particle Learning of Gaussian Processes
2014-12-02 radar Fundamental Formulas for Radar
2014-12-02 RPANDA Phylogenetic ANalyses of DiversificAtion
2014-12-02 RQuantLib R Interface to the QuantLib Library
2014-12-02 rrcov Scalable Robust Estimators with High Breakdown Point
2014-12-02 rrcovHD Robust multivariate Methods for High Dimensional Data
2014-12-02 rrcovNA Scalable Robust Estimators with High Breakdown Point for Incomplete Data
2014-12-02 turfR TURF Analysis for R
2014-12-02 VAR.etp VAR modelling: estimation, testing, and prediction
2014-12-02 wrassp Interface to the ASSP Library
2014-12-01 fda.usc Functional Data Analysis and Utilities for Statistical Computing
2014-12-01 kriging Ordinary Kriging
2014-12-01 lintr Static R Code Analysis
2014-12-01 MindOnStats Data sets included in Utts and Heckard's Mind on Statistics
2014-12-01 occ Estimates PET neuroreceptor occupancies
2014-12-01 ssd Sample Size Determination (SSD) for Unordered Categorical Data
2014-11-30 rFerns Random ferns classifier
2014-11-30 rngwell19937 Random number generator WELL19937a with 53 or 32 bit output
2014-11-29 enviPick Peak picking for high resolution mass spectrometry data
2014-11-29 Lmoments L-moments and quantile mixtures
2014-11-29 matrixpls Matrix-based Partial Least Squares estimation
2014-11-29 mco Multiple Criteria Optimization Algorithms and Related Functions
2014-11-29 rainfreq Rainfall Frequency (Design Storm) Estimates from the US National Weather Service
2014-11-29 revealedPrefs Revealed Preferences and Microeconomic Rationality
2014-11-29 simrel Linear Model Data Simulation and Design of Computer Experiments
2014-11-28 EnsemblePCReg Extensible Package for Principal-Component-Regression-based Integration of Base Learners
2014-11-28 EnsemblePenReg Extensible Classes and Methods for Penalized-Regression-based Integration of Base Learners
2014-11-28 highfrequency Tools For Highfrequency Data Analysis
2014-11-28 Unicode Unicode Data and Utilities
2014-11-27 apt Asymmetric Price Transmission (apt)
2014-11-27 CINOEDV Co-Information based N-Order Epistasis Detector and Visualizer
2014-11-27 DECIDE DEComposition of Indirect and Direct Effects
2014-11-27 erer Empirical Research in Economics with R
2014-11-27 genpathmox Generalized PATHMOX Algorithm for PLS-PM, LS and LAD Regression
2014-11-27 miRtest combined miRNA- and mRNA-testing
2014-11-27 orderedLasso Ordered Lasso and Time-lag Sparse Regression
2014-11-27 rags2ridges Ridge Estimation of Precision Matrices from High-Dimensional Data
2014-11-27 Rmpfr R MPFR - Multiple Precision Floating-Point Reliable
2014-11-27 SSrat Two-dimensional sociometric status determination with rating scales
2014-11-27 superbiclust Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering)
2014-11-26 EstSimPDMP Estimation and Simulation for PDMPs
2014-11-26 gWidgetsRGtk2 Toolkit implementation of gWidgets for RGtk2
2014-11-26 hierarchicalDS Functions For Performing Hierarchical Analysis of Distance Sampling Data
2014-11-26 irace Iterated Racing Procedures
2014-11-26 jaatha A Fast Parameter Estimation Method for Evolutionary Biology
2014-11-26 kpodclustr Method for Clustering Partially Observed Data
2014-11-26 MCPMod Design and Analysis of Dose-Finding Studies (see also DoseFinding package)
2014-11-26 moduleColor Basic Module Functions
2014-11-26 NHMM Bayesian NHMM Modeling (Multiple Time Series)
2014-11-26 SunterSampling Sunter's sampling design
2014-11-25 acss Algorithmic Complexity for Short Strings
2014-11-25 bipartite Visualising bipartite networks and calculating some (ecological) indices
2014-11-25 dataframes2xls dataframes2xls writes data frames to xls files
2014-11-25 DiscreteInverseWeibull Discrete inverse Weibull distribution
2014-11-25 distrMod Object Oriented Implementation of Probability Models
2014-11-25 dse Dynamic Systems Estimation (time series package)
2014-11-25 dslice Dynamic slicing
2014-11-25 GPArotation GPA Factor Rotation
2014-11-25 gsarima Two functions for Generalized SARIMA time series simulation
2014-11-25 iccbeta Multilevel model intraclass correlation for slope heterogeneity
2014-11-25 IRTShiny Item Response Theory via Shiny
2014-11-25 Julia Fractal Image Data Generator
2014-11-25 KODAMA Knowledge discovery by accuracy maximization
2014-11-25 maboost Binary and Multiclass Boosting Algorithms
2014-11-25 mistral Methods in Structural Reliability
2014-11-25 multilevelPSA Multilevel Propensity Score Analysis
2014-11-25 musicNMR Conversion of Nuclear Magnetic Resonance spectrum in audio file
2014-11-25 rstiefel Random orthonormal matrix generation on the Stiefel manifold
2014-11-25 setRNG Set (Normal) Random Number Generator and Seed
2014-11-25 SMR Externally Studentized Midrange Distribution
2014-11-25 soma General-Purpose Optimisation With the Self-Organising Migrating Algorithm
2014-11-25 StressStrength Computation and estimation of reliability of stress-strength models
2014-11-25 SweaveListingUtils Utilities for Sweave together with TeX listings package
2014-11-24 acepack ace() and avas() for selecting regression transformations
2014-11-24 Bergm Bayesian analysis for exponential random graph models
2014-11-24 choiceDes Design Functions for Choice Studies
2014-11-24 choplump Choplump tests
2014-11-24 genridge Generalized Ridge Trace Plots for Ridge Regression
2014-11-24 paleobioDB Download and Process Data from the Paleobiology Database
2014-11-24 pvclass P-values for Classification
2014-11-24 RCMIP5 Tools for Manipulating and Summarizing CMIP5 Data
2014-11-24 rdatamarket Data access API for DataMarket.com
2014-11-24 RNCEP Obtain, Organize, and Visualize NCEP Weather Data
2014-11-24 Rsolnp General Non-linear Optimization
2014-11-24 sgr Sample Generation by Replacement
2014-11-24 SimRAD Simulations to predict the number of loci expected in RAD and GBS approaches
2014-11-24 someKfwer Controlling the Generalized Familywise Error Rate
2014-11-24 xpose4 Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
2014-11-23 EloRating Animal Dominance Hierarchies by Elo Rating
2014-11-22 arfima Fractional ARIMA Time Series Modeling
2014-11-22 magrittr A Forward-Pipe Operator for R
2014-11-22 MAPA Multiple Aggregation Prediction Algorithm
2014-11-22 PASWR2 Probability and Statistics with R, Second Edition
2014-11-22 pdc Permutation Distribution Clustering
2014-11-22 PoweR Computation of Power and Level Tables for Hypothesis Tests
2014-11-22 proteomics Statistical Analysis of High Throughput Proteomics Data
2014-11-22 sisus SISUS: Stable Isotope Sourcing using Sampling
2014-11-21 Ramd Tools For Managing File/function Dependencies In R
2014-11-20 BACprior Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm
2014-11-20 bglm Bayesian Estimation in Generalized Linear Models
2014-11-20 crmn CCMN and other noRMalizatioN methods for metabolomics data
2014-11-20 deltaPlotR Identification of dichotomous differential item functioning (DIF) using Angoff's Delta Plot method
2014-11-20 gset Group Sequential Design in Equivalence Studies
2014-11-20 ilc Lee-Carter Mortality Models using Iterative Fitting Algorithms
2014-11-20 RAPIDR Reliable Accurate Prenatal non-Invasive Diagnosis R package
2014-11-20 treethresh Methods for Tree-based Local Adaptive Thresholding
2014-11-20 tsintermittent Intermittent Time Series Forecasting
2014-11-20 x12 x12 - wrapper function and structure for batch processing
2014-11-20 x12GUI X12 - Graphical User Interface
2014-11-19 acnr Annotated Copy-Number Regions
2014-11-19 adaptivetau Tau-leaping stochastic simulation
2014-11-19 analogueExtra Additional functions for use with the analogue package
2014-11-19 basicspace Recovering a Basic Space from Issue Scales
2014-11-19 cocorresp Co-correspondence Analysis Methods
2014-11-19 PGICA Parallel Group ICA Algorithm
2014-11-19 QuACN QuACN: Quantitative Analysis of Complex Networks
2014-11-19 SEAsic Score Equity Assessment- summary index computation
2014-11-19 sqlutils Utilities for working with SQL files
2014-11-19 waterData An R Package for Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data
2014-11-18 attribrisk Population Attributable Risk
2014-11-18 boolean3 Boolean Binary Response Models
2014-11-18 cooccur Probabilistic Species Co-occurrence Analysis in R
2014-11-18 lokern Kernel Regression Smoothing with Local or Global Plug-in Bandwidth
2014-11-18 phylolm Phylogenetic Linear Regression
2014-11-18 rsml Plant Root System Markup Language (RSML) File Processing
2014-11-18 smacpod Statistical Methods for the Analysis of Case-Control Point Data
2014-11-18 spatialTailDep Estimation of spatial tail dependence models
2014-11-18 TSclust Time Series Clustering Utilities
2014-11-17 goric Generalized Order-Restricted Information Criterion
2014-11-17 mcprofile Multiple Contrast Profiles
2014-11-17 randtests Testing randomness in R
2014-11-17 sla Two-Group Straight Line ANCOVA
2014-11-17 spThin Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models
2014-11-16 FLSSS Fixed Size Subset Sum Solution
2014-11-16 vudc Visualization of Univariate Data for Comparison
2014-11-15 Amelia Amelia II: A Program for Missing Data
2014-11-15 vowels Vowel Manipulation, Normalization, and Plotting
2014-11-14 entropy Estimation of Entropy, Mutual Information and Related Quantities
2014-11-14 equateIRT Direct, Chain and Average Equating Coefficients with Standard Errors Using IRT Methods
2014-11-14 ttScreening Genome-wide DNA methylation sites screening by use of training and testing samples
2014-11-13 aftgee Accelerated Failure Time Model with Generalized Estimating Equations
2014-11-13 bdscale Remove Weekends and Holidays From ggplot2 Axes
2014-11-13 dbarts Discrete Bayesian Additive Regression Trees Sampler
2014-11-13 entropart Entropy Partitioning to Measure Diversity
2014-11-13 megaptera MEGAPhylogeny Techniques in R
2014-11-13 optimx A Replacement and Extension of the optim() Function
2014-11-13 pbkrtest Parametric bootstrap and Kenward-Roger-based methods for mixed model comparison
2014-11-13 toxtestD Experimental design for binary toxicity tests
2014-11-12 lpSolveAPI R Interface for lp_solve version 5.5.2.0
2014-11-12 R2GUESS Wrapper functions for GUESS
2014-11-12 rmongodb R-MongoDB driver
2014-11-11 catdata Categorical Data
2014-11-11 DepthProc DepthProc
2014-11-11 glogis Fitting and Testing Generalized Logistic Distributions
2014-11-11 lymphclon Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates
2014-11-11 rTensor Tools for tensor analysis and decomposition
2014-11-11 TopKLists Inference, aggregation and visualization for top-k ranked lists
2014-11-10 episplineDensity Density Estimation with Soft Information by Exponential Epi-splines
2014-11-10 gsDesign Group Sequential Design
2014-11-10 HWxtest Exact Tests for Hardy-Weinberg Proportions
2014-11-10 ionflows Calculate the Number of Required Flows for Semiconductor Sequencing
2014-11-10 ips Interfaces to Phylogenetic Software in R
2014-11-10 ISBF Iterative Selection of Blocks of Features - ISBF
2014-11-10 ModelGood Validation of risk prediction models
2014-11-10 PHYLOGR Functions for Phylogenetically Based Statistical Analyses
2014-11-10 Rcpp11 R and C++11
2014-11-10 Rothermel Rothermel fire spread model for R
2014-11-10 TUWmodel Lumped Hydrological Model for Education Purposes
2014-11-09 DOvalidation Local Linear Hazard Estimation with Do-Validated and Cross-Validated Bandwidths
2014-11-09 riskSimul Risk Quantification for Stock Portfolios under the T-Copula Model
2014-11-08 geometry Mesh generation and surface tesselation
2014-11-08 LinCal Static Univariate Frequentist and Bayesian Linear Calibration
2014-11-08 OptionPricing Option Pricing with Efficient Simulation Algorithms
2014-11-07 BB Solving and Optimizing Large-Scale Nonlinear Systems
2014-11-07 BTYD Implementing Buy 'Til You Die Models
2014-11-07 dglm Double Generalized Linear Models
2014-11-07 ggswissmaps Offers Various Swiss Maps as ggplot2 Objects
2014-11-07 npsm Package for Nonparametric Statistical Methods using R
2014-11-07 PANDA Preferential Attachment Based Common Neighbor Distribution Derived Functional Associations
2014-11-07 plot3D Plotting multi-dimensional data
2014-11-07 sqldf Perform SQL Selects on R Data Frames
2014-11-07 weightedScores Weighted Scores Method for Regression Models with Dependent Data
2014-11-06 anim.plots Simple Animated Plots For R
2014-11-06 CpGFilter CpG Filtering Method Based on Intra-class Correlation Coefficients
2014-11-06 diagram Functions for visualising simple graphs (networks), plotting flow diagrams
2014-11-06 dma Dynamic model averaging
2014-11-06 elliptic elliptic functions
2014-11-06 lsgl Linear Sparse Group Lasso
2014-11-06 msgl High Dimensional Multiclass Classification Using Sparse Group Lasso
2014-11-06 PLSbiplot1 The Partial Least Squares (PLS) Biplot
2014-11-06 pushoverr Send push notifications using Pushover
2014-11-06 RobustAFT Truncated Maximum Likelihood fit and Robust Accelerated Failure Time regression for Gaussian and logWeibull case
2014-11-06 rootSolve Nonlinear root finding, equilibrium and steady-state analysis of ordinary differential equations
2014-11-06 xtal Crystallization Toolset
2014-11-05 hcp Change Point Estimation for Regression with Heteroscedastic Data
2014-11-05 MAT Multidimensional Adaptive Testing
2014-11-05 MPAgenomics Multi-Patient Analysis of Genomic Markers
2014-11-05 ordinalgmifs Ordinal Regression for High-dimensional Data
2014-11-05 shape Functions for plotting graphical shapes, colors
2014-11-05 strap Stratigraphic Tree Analysis for Palaeontology
2014-11-05 TRSbook Functions and Datasets to Accompany the Book "The R Software: Fundamentals of Programming and Statistical Analysis"
2014-11-05 WARN Weaning Age Reconstruction with Nitrogen isotope analysis
2014-11-04 feature Feature significance for multivariate kernel density estimation
2014-11-04 FME A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability, Monte Carlo Analysis
2014-11-04 marelac Tools for Aquatic Sciences
2014-11-04 prim Patient Rule Induction Method (PRIM)
2014-11-04 sglOptim Sparse group lasso generic optimizer
2014-11-03 BayesTree Bayesian Additive Regression Trees
2014-11-03 CombinePValue Combine a Vector of Correlated p-values
2014-11-03 limSolve Solving Linear Inverse Models
2014-11-03 rARPACK R wrapper of ARPACK for large scale eigenvalue/vector problems, on both dense and sparse matrices
2014-11-03 rjson JSON for R
2014-11-03 ScoreGGUM Score Persons Using the Generalized Graded Unfolding Model
2014-11-03 sdcTarget Statistical Disclosure Control Substitution Matrix Calculator
2014-11-02 bcpa Behavioral change point analysis of animal movement
2014-11-02 CountsEPPM Mean and variance modeling of count data
2014-11-02 OptimalCutpoints Computing optimal cutpoints in diagnostic tests
2014-11-01 kaps K-Adaptive Partitioning for Survival data
2014-11-01 RMTstat Distributions, Statistics and Tests derived from Random Matrix Theory
2014-11-01 smac Sparse Multi-category Angle-Based Large-Margin Classifiers
2014-10-31 PrivateLR Differentially Private Regularized Logistic Regression
2014-10-31 tuple Find every match, or orphan, duplicate, triplicate, or other replicated values
2014-10-30 fAssets Rmetrics - Analysing and Modelling Financial Assets
2014-10-30 fPortfolio Rmetrics - Portfolio Selection and Optimization
2014-10-30 mapplots Data Visualisation on Maps
2014-10-29 fBasics Rmetrics - Markets and Basic Statistics
2014-10-29 isdals Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences
2014-10-29 ldr Methods for likelihood-based dimension reduction in regression
2014-10-28 CateSelection Categorical Variable Selection Methods
2014-10-28 energy E-statistics (energy statistics)
2014-10-28 lassoscore High-Dimensional Inference with the Penalized Score Test
2014-10-28 safi Sensitivity Analysis for Functional Input
2014-10-27 astsa Applied Statistical Time Series Analysis
2014-10-27 DALY DALY Calculator - A GUI for stochastic DALY calculation in R
2014-10-27 qdm Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments
2014-10-27 rangeMapper A platform for the study of macroecology of life history traits
2014-10-27 ropensecretsapi R Package for the OpenSecrets.org API
2014-10-27 RQDA R-based Qualitative Data Analysis
2014-10-26 RSelenium R bindings for Selenium WebDriver
2014-10-25 BayesMixSurv Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification
2014-10-25 choroplethrMaps Contains maps used by the choroplethr package
2014-10-25 DBKGrad Discrete Beta Kernel Graduation of Mortality Data
2014-10-25 FSelector Selecting attributes
2014-10-25 highD2pop Two-Sample Tests for Equality of Means in High Dimension
2014-10-25 ivpack Instrumental Variable Estimation
2014-10-25 RSQLite SQLite Interface for R
2014-10-25 simTool Conduct Simulation Studies with a Minimal Amount of Source Code
2014-10-25 sparr The sparr package: SPAtial Relative Risk
2014-10-25 TwoStepCLogit Conditional logistic regression: A two-step estimation method
2014-10-25 vecsets like base::sets tools but keeps duplicate elements
2014-10-23 CAMAN Finite Mixture Models and meta-analysis tools - based on C.A.MAN
2014-10-23 IsingFit Fitting Ising models using the eLasso method
2014-10-23 matR Metagenomics Analysis Tools for R
2014-10-23 sld Estimation and Use of the Quantile-Based Skew Logistic Distribution
2014-10-23 splitstackshape Stack and Reshape Datasets After Splitting Concatenated Values
2014-10-22 confidence Confidence Estimation of Environmental State Classifications
2014-10-22 FDGcopulas Multivariate Dependence with FDG Copulas
2014-10-22 indicoio A simple R Wrapper for the indico set of APIs - http://indico.io
2014-10-22 JMdesign Joint Modeling of Longitudinal and Survival Data - Power Calculation
2014-10-22 ParetoPosStable Computing, fitting and validating the PPS distribution
2014-10-22 pcaPP Robust PCA by Projection Pursuit
2014-10-22 sigloc Signal Location Estimation
2014-10-22 stepp Subpopulation Treatment Effect Pattern Plot (STEPP)
2014-10-21 cdcsis Conditional Distance Correlation and Its Related Feature Screening Method
2014-10-21 equate Observed-Score Linking and Equating
2014-10-21 MESS Miscellaneous Esoteric Statistical Scripts
2014-10-21 nhlscrapr Compiling the NHL Real Time Scoring System Database for easy use in R
2014-10-21 npsp Nonparametric spatial (geo)statistics
2014-10-21 tclust Robust Trimmed Clustering
2014-10-20 icapca Mixed ICA/PCA
2014-10-20 MDSGUI A GUI for interactive MDS in R
2014-10-20 multiwayvcov Multi-way Standard Error Clustering
2014-10-20 npmlreg Nonparametric maximum likelihood estimation for random effect models
2014-10-20 Rook Rook - a web server interface for R
2014-10-19 flare Family of Lasso Regression
2014-10-19 multispatialCCM Multispatial Convergent Cross Mapping
2014-10-19 picasso Pathwise Calibrated Sparse Shooting Algorithm
2014-10-18 landpred Landmark Prediction of a Survival Outcome
2014-10-18 rareNMtests Ecological and biogeographical null model tests for comparing rarefaction curves
2014-10-18 stochprofML Stochastic Profiling using Maximum Likelihood Estimation
2014-10-17 ecoval Procedures for Ecological Assessment of Surface Waters
2014-10-17 fat2Lpoly Two-locus Family-based Association Test with Polytomous Outcome
2014-10-17 gsg Calculation of selection coefficients
2014-10-17 likert Functions to analyze and visualize likert type items
2014-10-17 mdscore Improved Score Tests for Generalized Linear Models
2014-10-17 pBrackets Plot Brackets
2014-10-17 RMKdiscrete Sundry Discrete Probability Distributions
2014-10-17 segmag Determine Event Boundaries in Event Segmentation Experiments
2014-10-16 Metatron Meta-analysis for Classification Data and Correction to Imperfect Reference
2014-10-16 NPCirc Nonparametric Circular Methods
2014-10-16 PubMedWordcloud PubMed Word Clouds
2014-10-16 RcmdrPlugin.steepness Steepness Rcmdr Plug-in
2014-10-16 rivernet Read, Analyze and Plot River Networks
2014-10-16 StMoSim Plots a QQ-Norm Plot with several Gaussian simulations
2014-10-16 transport Optimal transport in various forms
2014-10-16 windex windex: Analysing convergent evolution using the Wheatsheaf index
2014-10-15 AlgDesign Algorithmic Experimental Design
2014-10-15 clustvarsel Variable Selection for Model-Based Clustering
2014-10-15 evtree Evolutionary Learning of Globally Optimal Trees
2014-10-15 GA Genetic Algorithms
2014-10-15 nsgp Non-Stationary Gaussian Process Regression
2014-10-15 SpecsVerification Forecast verification routines for the SPECS FP7 project
2014-10-15 spgrass6 Interface between GRASS 6+ geographical information system and R
2014-10-15 utility Construct, Evaluate and Plot Value and Utility Functions
2014-10-15 vetools Tools for Venezuelan Environmental Data
2014-10-14 dice Calculate probabilities of various dice-rolling events
2014-10-14 FADA Variable selection for supervised classification in high dimension
2014-10-14 InterVA4 Replicate and analyse InterVA4
2014-10-14 mclogit Mixed Conditional Logit
2014-10-14 overlap Estimates of coefficient of overlapping for animal activity patterns
2014-10-13 CP Conditional Power Calculations
2014-10-13 datamart Unified access to your data sources
2014-10-13 popRange popRange: A spatially and temporally explicit forward genetic simulator
2014-10-13 QualInt Test for Qualitative Interactions
2014-10-13 rcdk rcdk - Interface to the CDK Libraries
2014-10-13 sptm SemiParametric Transformation Model Methods
2014-10-12 BSGW Bayesian Survival Model using Generalized Weibull Regression
2014-10-12 ConvergenceConcepts Seeing convergence concepts in action
2014-10-12 RNetLogo Provides an Interface to the Agent-Based Modelling Platform NetLogo
2014-10-10 MplusAutomation Automating Mplus Model Estimation and Interpretation
2014-10-10 RSQLServer SQL Server R Database Interface (DBI)
2014-10-09 anominate alpha-NOMINATE Ideal Point Estimator
2014-10-09 ENiRG Ecological Niche in R and GRASS
2014-10-09 minqa Derivative-free optimization algorithms by quadratic approximation
2014-10-09 mpcv Multivariate Process Capability Vector
2014-10-08 moult Models for analysing moult in birds
2014-10-08 Rdsm Threads Environment for R
2014-10-07 CINID Curculionidae INstar IDentification
2014-10-07 mnormpow Multivariate Normal Distributions with Power Integrand
2014-10-07 PLordprob Multivariate Ordered Probit Model via Pairwise Likelihood
2014-10-07 qcc Quality Control Charts
2014-10-07 sft Functions for Systems Factorial Technology Analysis of Data
2014-10-07 TEEReg Trimmed Elemental Estimation for Linear Models
2014-10-07 TurtleGraphics Turtle graphics in R
2014-10-07 VecStatGraphs3D Vector analysis using graphical and analytical methods in 3D
2014-10-06 GISTools Some further GIS capabilities for R
2014-10-06 grofit The package was developed to fit fit many growth curves obtained under different conditions
2014-10-06 lllcrc Local Log-linear Models for Capture-Recapture
2014-10-06 mvprpb Orthant Probability of the Multivariate Normal Distribution
2014-10-06 NB Maximum Likelihood method in estimating effective population size from genetic data
2014-10-06 pingr Check If a Remote Computer is Up
2014-10-06 ProjectTemplate Automates the creation of new statistical analysis projects
2014-10-06 snipEM Snipping methods for robust estimation and clustering
2014-10-06 YourCast Forecasting age-sex-country-cause mortality rates
2014-10-06 ZIM Zero-Inflated Models for Count Time Series with Excess Zeros
2014-10-05 catIrt An R Package for Simulating IRT-Based Computerized Adaptive Tests
2014-10-05 ENMeval Automated runs and evaluations of ecological niche models
2014-10-05 pbdMPI Programming with Big Data – Interface to MPI
2014-10-04 R2HTML HTML exportation for R objects
2014-10-04 SightabilityModel Wildlife Sightability Modeling
2014-10-04 vec2dtransf 2D Cartesian Coordinate Transformation
2014-10-03 enpls Ensemble Partial Least Squares (EnPLS) Regression
2014-10-02 ConConPiWiFun Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions
2014-10-02 data.table Extension of data.frame
2014-10-02 DDIwR DDI with R
2014-10-02 mycor Automatic Correlation and Regression Test in a Data Frame
2014-10-02 shrink Global, Parameterwise and Joint Post-Estimation Shrinkage
2014-10-02 TED Turbulence Time Series Event Detection and Classification
2014-10-01 exsic Convenience Functions for Botanists to Create Specimens Indices
2014-10-01 SQDA Sparse Quadratic Discriminant Analysis
2014-10-01 steepness Testing Steepness of Dominance Hierarchies
2014-09-30 mdsdt Functions for Analysis of Data with General Recognition Theory
2014-09-30 protViz Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
2014-09-29 activity Animal Activity Statistics
2014-09-29 aLFQ An R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data
2014-09-29 atmcmc Automatically Tuned Markov Chain Monte Carlo
2014-09-29 dendsort Modular Leaf Ordering Methods for Dendrogram Nodes
2014-09-29 DoE.wrapper Wrapper package for design of experiments functionality
2014-09-29 EffectStars Visualization of Categorical Response Models
2014-09-29 gapmap Functions for Drawing Gapped Cluster Heatmap with ggplot2
2014-09-29 ggdendro Tools for extracting dendrogram and tree diagram plot data for use with ggplot2
2014-09-29 GPFDA Apply Gaussian Process in Functional data analysis
2014-09-29 hierfstat Estimation and tests of hierarchical F-statistics
2014-09-29 httpRequest Basic HTTP Request
2014-09-29 log4r A simple logging system for R, based on log4j
2014-09-29 rFDSN Get Seismic Data from the International Federation of Digital Seismograph Networks
2014-09-29 ScottKnott The ScottKnott Clustering Algorithm
2014-09-29 sprint Simple Parallel R INTerface
2014-09-28 DoseFinding Planning and Analyzing Dose Finding experiments
2014-09-28 ecoretriever R Interface to the EcoData Retriever
2014-09-28 expands ExPANdS
2014-09-28 HotDeckImputation Hot Deck Imputation Methods for Missing Data
2014-09-28 mc2d Tools for Two-Dimensional Monte-Carlo Simulations
2014-09-28 microbenchmark Accurate Timing Functions
2014-09-28 neural Neural Networks
2014-09-28 readMzXmlData Reads Mass Spectrometry Data in mzXML Format
2014-09-27 MetFns Analysis of Visual Meteor Data
2014-09-27 oro.pet Rigorous - Positron Emission Tomography
2014-09-27 propagate Propagation of Uncertainty
2014-09-26 ADDT A Package for Analysis of Accelerated Destructive Degradation Test Data
2014-09-26 alr4 Data to accompany Applied Linear Regression 4rd edition
2014-09-26 aplpack Another Plot PACKage: stem.leaf, bagplot, faces, spin3R, plotsummary, plothulls, and some slider functions
2014-09-26 cape Combined analysis of pleiotropy and epistasis
2014-09-26 GenWin Spline Based Window Boundaries for Genomic Analyses
2014-09-26 Guerry Maps, data and methods related to Guerry (1833) "Moral Statistics of France"
2014-09-26 iC10TrainingData Training datasets for iC10 package
2014-09-26 jSonarR jSonar Analytics Platform API for R
2014-09-26 oc OC Roll Call Analysis Software
2014-09-25 betareg Beta Regression
2014-09-25 ivprobit Instrumental variables probit model
2014-09-25 qqman Q-Q and manhattan plots for GWAS data
2014-09-25 SPREDA Statistical Package for Reliability Data Analysis
2014-09-24 birdring Methods to analyse ring re-encounter data
2014-09-24 Compind Composite indicators functions
2014-09-24 DBI R Database Interface
2014-09-24 deming Deming, Thiel-Sen and Passing-Bablock Regression
2014-09-24 parsedate Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats
2014-09-24 SimplicialCubature Numerical integration of functions over simplices
2014-09-24 VennDiagram Generate high-resolution Venn and Euler plots
2014-09-23 pvsR An R package to interact with the Project Vote Smart API for scientific research
2014-09-23 SemiPar Semiparametic Regression
2014-09-23 wnominate WNOMINATE Roll Call Analysis Software
2014-09-22 documair Automatic Documentation for R packages
2014-09-22 IBrokers R API to Interactive Brokers Trader Workstation
2014-09-22 mpmi Mixed-pair mutual information estimators
2014-09-22 predictmeans Calculate Predicted Means for Linear Models
2014-09-21 CGP Composite Gaussian process models
2014-09-21 RcmdrPlugin.MA Graphical User Interface for Conducting Meta-Analyses in R
2014-09-21 sendmailR send email using R
2014-09-21 trotter Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector
2014-09-20 Density.T.HoldOut Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation
2014-09-20 mitools Tools for multiple imputation of missing data
2014-09-20 OrdLogReg Ordinal Logic Regression
2014-09-20 RcppOctave Seamless Interface to Octave – and Matlab
2014-09-19 allelematch Identifying unique multilocus genotypes where genotyping error and missing data may be present
2014-09-19 beanplot Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot)
2014-09-19 BEANSP Bayesian Estimate of Age-specific Nest Survival Probabilities
2014-09-19 bReeze Functions for wind resource assessment
2014-09-19 comclim Community climate statistics
2014-09-19 edgeRun More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data
2014-09-19 iki.dataclim Consistency, Homogeneity and Summary Statistics of Climatological Data
2014-09-19 LogicForest Logic Forest
2014-09-19 nat.nblast NeuroAnatomy Toolbox (nat) Extension for Assessing Neuron Similarity and Clustering
2014-09-19 nlWaldTest Wald Test of nonlinear restrictions for regression parameters
2014-09-19 opentraj Tools for Creating and Analysing Air Trajectory Data
2014-09-19 RidgeFusion R Package for Ridge Fusion in Statistical Learning
2014-09-19 RMOA Connect R with MOA for Massive Online Analysis
2014-09-19 sdmvspecies Create virtual species for species distribution modelling
2014-09-19 SmoothHazard Fitting illness-death model for interval-censored data
2014-09-19 spatialnbda Performs spatial NBDA in a Bayesian context
2014-09-18 adaptDA Adaptive Mixture Discriminant Analysis
2014-09-18 bbo Biogeography-Based Optimization
2014-09-18 betategarch Simulation, estimation and forecasting of Beta-Skew-t-EGARCH models
2014-09-18 clhs Conditioned Latin Hypercube Sampling
2014-09-18 gfcanalysis Tools for working with Hansen et al. 2013 Global Forest Change dataset
2014-09-18 ivbma Bayesian Instrumental Variable Estimation and Model Determination via Conditional Bayes Factors
2014-09-18 modTempEff Modelling temperature effects using time series data
2014-09-18 TreeSim Simulating trees under the birth-death model
2014-09-18 uskewFactors Model-based clustering via mixtures of unrestricted skew-t factor analyzer models
2014-09-17 fCopulae Rmetrics - Bivariate Dependence Structures with Copulae
2014-09-17 qgtools Tools for Quantitative Genetics Data Analyses
2014-09-17 RadioSonde Tools for plotting skew-T diagrams and wind profiles
2014-09-17 RMOAjars External jars required for package RMOA
2014-09-16 compute.es Compute Effect Sizes
2014-09-16 dlm Bayesian and Likelihood Analysis of Dynamic Linear Models
2014-09-16 fRegression Rmetrics - Regression Based Decision and Prediction
2014-09-16 GuardianR The Guardian API Wrapper
2014-09-16 hypergea Hypergeometric tests
2014-09-16 m4fe Models for Financial Economics
2014-09-16 ncdf4 Interface to Unidata netCDF (version 4 or earlier) format data files
2014-09-16 PerformanceAnalytics Econometric tools for performance and risk analysis
2014-09-16 polidata Political Data Interface in R
2014-09-16 qat Quality Assurance Toolkit
2014-09-16 UPMASK Unsupervised Photometric Membership Assignment in Stellar Clusters
2014-09-15 binequality Methods for Analyzing Binned Income Data
2014-09-15 demography Forecasting mortality, fertility, migration and population data
2014-09-15 fmsb Functions for medical statistics book with some demographic data
2014-09-15 genlasso Path algorithm for generalized lasso problems
2014-09-15 hot.deck Multiple Hot-deck Imputation
2014-09-15 MissingDataGUI A GUI for Missing Data Exploration
2014-09-15 netweavers NetWeAvers: Weighted Averages for Networks
2014-09-15 propOverlap Feature (gene) selection based on the Proportional Overlapping Scores
2014-09-15 qpcR Modelling and analysis of real-time PCR data
2014-09-15 Ryacas R interface to the yacas computer algebra system
2014-09-15 SOR Estimation using Sequential Offsetted Regression
2014-09-14 agop Aggregation Operators and Preordered Sets
2014-09-14 EDISON Network Reconstruction and Changepoint Detection
2014-09-14 RcmdrPlugin.coin Rcmdr Coin Plug-In
2014-09-14 RH2 DBI/RJDBC interface to h2 Database
2014-09-14 RPMM Recursively Partitioned Mixture Model
2014-09-13 geepack Generalized Estimating Equation Package
2014-09-13 Lahman Sean Lahman's Baseball Database
2014-09-13 phyloland Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework
2014-09-13 referenceIntervals Reference Intervals
2014-09-12 Mobilize Mobilize plots and functions
2014-09-12 nettools A Network Comparison Framework
2014-09-12 PepPrep Insilico peptide mutation, digestion and homologous comparison
2014-09-12 RGraphics Data and Functions from the book R Graphics, Second Edition
2014-09-12 SimComp Simultaneous Comparisons for Multiple Endpoints
2014-09-12 xtable Export tables to LaTeX or HTML
2014-09-12 zCompositions Imputation of Zeros and Nondetects in Compositional Data Sets
2014-09-11 knnIndep Independence tests and benchmarks
2014-09-11 lefse Phylogenetic and Functional Analyses for Ecology
2014-09-11 OjaNP Multivariate Methods Based on the Oja Median and Related Concepts
2014-09-11 RankResponse Ranking Responses in a Single Response Question or a Multiple Response Question
2014-09-11 rChoiceDialogs rChoiceDialogs collection
2014-09-11 rsubgroup Subgroup Discovery and Analytics
2014-09-10 caTools Tools: moving window statistics, GIF, Base64, ROC AUC, etc
2014-09-10 cgam Constrained Generalized Additive Model
2014-09-10 eegkitdata Data for package eegkit
2014-09-10 ForwardSearch Forward Search using asymptotic theory
2014-09-10 hwriter HTML Writer - Outputs R objects in HTML format
2014-09-10 mmcm Modified Maximum Contrast Method
2014-09-10 Ohmage R Client for Ohmage 2 server
2014-09-10 RcmdrPlugin.IPSUR An IPSUR Plugin for the R Commander
2014-09-10 saery Small Area Estimation for Rao and Yu Model
2014-09-10 Sim.DiffProc Simulation of Diffusion Processes
2014-09-09 bpkde Back-Projected Kernel Density Estimation
2014-09-09 CircE Circumplex models Estimation
2014-09-09 couchDB Connect and work with couchDB databases
2014-09-09 globalOptTests Objective functions for benchmarking the performance of global optimization algorithms
2014-09-09 micropan Microbial Pan-genome Analysis
2014-09-09 spam SPArse Matrix
2014-09-08 astro Astronomy Functions, Tools and Routines
2014-09-08 easyanova Analysis of variance and other important complementary analyzes
2014-09-08 emulator Bayesian emulation of computer programs
2014-09-08 funHDDC Model-based clustering in group-specific functional subspaces
2014-09-08 htmltools Tools for HTML
2014-09-08 ibd INCOMPLETE BLOCK DESIGNS
2014-09-08 lunar Lunar Phase & Distance, Seasons and Other Environmental Factors
2014-09-08 minque An R Package for Linear Mixed Model Analyses
2014-09-08 RcmdrPlugin.EBM Rcmdr Evidence Based Medicine Plug-In package
2014-09-08 slackr Send messages, images, R objects and files to Slack.com channels/users
2014-09-08 SNFtool Similarity Network Fusion
2014-09-07 bionetdata Biological and chemical data networks
2014-09-07 OpenRepGrid Tools to analyse repertory grid data
2014-09-07 PerfMeas PerfMeas: Performance Measures for ranking and classification tasks
2014-09-07 Rsomoclu R package for somoclu
2014-09-07 rucm Implementation of Unobserved Components Model (UCM) in R
2014-09-06 fMultivar Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions
2014-09-06 GDAtools A toolbox for the analysis of categorical data in social sciences, and especially Geometric Data Analysis
2014-09-06 pyramid Functions to draw population pyramid
2014-09-05 caseMatch Identify similar cases for qualitative case studies
2014-09-05 GxM Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models
2014-09-05 readbitmap Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG)
2014-09-05 REBayes Empirical Bayes Estimation and Inference in R
2014-09-04 BCA Business and Customer Analytics
2014-09-04 cooptrees Cooperative aspects of optimal trees in weighted graphs
2014-09-04 CopulaRegression Bivariate Copula Based Regression Models
2014-09-04 helloJavaWorld Hello Java World
2014-09-04 idr Irreproducible discovery rate
2014-09-04 insuranceData A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance
2014-09-04 kmi Kaplan-Meier multiple imputation for the analysis of cumulative incidence functions in the competing risks setting
2014-09-04 miscset Miscellaneous Tools Set
2014-09-04 MRCV Methods for Analyzing Multiple Response Categorical Variables (MRCVs)
2014-09-04 parcor Regularized estimation of partial correlation matrices
2014-09-04 plsdof Degrees of Freedom and Statistical Inference for Partial Least Squares Regression
2014-09-04 PP Person Parameter estimation
2014-09-04 ppls Penalized Partial Least Squares
2014-09-04 pqantimalarials web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa
2014-09-04 RcmdrPlugin.BCA Rcmdr Plug-In for Business and Customer Analytics
2014-09-04 sanon Stratified Analysis with Nonparametric covariable adjustment
2014-09-04 SDaA Sampling: Design and Analysis
2014-09-04 sparseSEM Sparse-aware Maximum Likelihood for Structural Equation Models
2014-09-03 coreTDT TDT for compound heterozygous and recessive models
2014-09-03 DNAtools Tools for analysing forensic genetic DNA data
2014-09-03 logitchoice Fitting l2-regularized logit choice models via generalized gradient descent
2014-09-03 upclass Updated Classification Methods using Unlabeled Data
2014-09-02 ds Descriptive Statistics
2014-09-02 exactmeta Exact fixed effect meta analysis
2014-09-02 optrees Optimal Trees in Weighted Graphs
2014-09-02 rappdirs Application directories: determine where to save data, caches and logs
2014-09-01 chebpol Multivariate Chebyshev interpolation
2014-09-01 heavy Package for robust estimation using heavy-tailed distributions
2014-09-01 lgarch Simulation and estimation of log-GARCH models
2014-09-01 RankAggreg Weighted rank aggregation
2014-09-01 Rbitcoin R & bitcoin integration
2014-09-01 RCEIM RCEIM - R Cross Entropy Inspired Method for Optimization
2014-09-01 traitr An interface for creating GUIs modeled in part after traits UI module for python
2014-08-31 chemosensors A tool for the design of synthetic experiments in machine olfaction
2014-08-31 chords Estimation in respondent driven samples
2014-08-31 lbfgs Limited-memory BFGS Optimization
2014-08-31 ngramr Retrieve and plot Google n-gram data
2014-08-31 pmg Poor Man's GUI
2014-08-31 rcdklibs rcdklib - CDK libraries packaged for R
2014-08-30 mcIRT IRT models for multiple choice items (mcIRT)
2014-08-30 nsRFA Non-supervised Regional Frequency Analysis
2014-08-30 survivalMPL Penalised Maximum Likelihood for Survival Analysis Models
2014-08-29 BIOM.utils Utilities for the BIOM (Biological Observation Matrix) Format
2014-08-29 Eplot Plotting longitudinal series
2014-08-29 FreeSortR Free Sorting data analysis
2014-08-29 iosmooth Functions for smoothing with infinite order flat-top kernels
2014-08-29 lakemorpho Lake morphometry in R
2014-08-29 MGSDA Multi-Group Sparse Discriminant Analysis
2014-08-29 mme Multinomial Mixed Effects Models
2014-08-29 raincpc Obtain and Analyze Rainfall Data from the Climate Prediction Center
2014-08-29 Rcapture Loglinear Models for Capture-Recapture Experiments
2014-08-29 RcmdrPlugin.FactoMineR Graphical User Interface for FactoMineR
2014-08-29 SQUAREM Squared extrapolation methods for accelerating fixed-point iterations
2014-08-29 turboEM A Suite of Convergence Acceleration Schemes for EM, MM and other fixed-point algorithms
2014-08-28 bfast Breaks For Additive Season and Trend (BFAST)
2014-08-28 BioStatR Initiation à la Statistique avec R
2014-08-28 bvarsv Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters
2014-08-28 cgAUC Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it
2014-08-28 georob Robust Geostatistical Analysis of Spatial Data
2014-08-28 gWidgets gWidgets API for building toolkit-independent, interactive GUIs
2014-08-28 ifultools Insightful Research Tools
2014-08-28 LatticeKrig Multiresolution Kriging based on Markov random fields
2014-08-28 RcmdrPlugin.DoE R Commander Plugin for (industrial) Design of Experiments
2014-08-27 blkergm Fitting block ERGM given the block structure on social networks
2014-08-27 dotenv Load environment variables from .env
2014-08-27 GMD Generalized Minimum Distance of distributions
2014-08-27 gsubfn Utilities for strings and function arguments
2014-08-27 lmeVarComp Testing for a subset of variance components in linear mixed models
2014-08-27 MultiSV MultiSV: an R package for identification of structural variations in multiple populations based on whole genome resequencing
2014-08-27 pamr Pam: prediction analysis for microarrays
2014-08-27 ptinpoly Point-In-Polyhedron Test (2D and 3D)
2014-08-27 SelvarMix Regularization for variable selection in model-based clustering and discriminant analysis
2014-08-27 shopifyr An R Interface to the Shopify API
2014-08-27 statebins statebins is an alternative to choropleth maps for USA States
2014-08-26 BTSPAS Bayesian Time-Strat. Population Analysis
2014-08-26 cents Censored time series
2014-08-26 gmatrix An R Package for Harnessing GPU Power
2014-08-26 HTSCluster Clustering high throughput sequencing (HTS) data
2014-08-26 KANT Package to identify and sort genes overexpressed
2014-08-26 minerva minerva: Maximal Information-Based Nonparametric Exploration R package for Variable Analysis
2014-08-26 testthatsomemore A mocking, stubbing, and file testing framework extending testthat
2014-08-25 commandr Command pattern in R
2014-08-25 CommonJavaJars Useful libraries for building a Java based GUI under R
2014-08-25 granova Graphical Analysis of Variance
2014-08-25 MultNonParam Multivariate Nonparametric Methods
2014-08-25 shotGroups Analyze shot group data
2014-08-24 CosmoPhotoz Photometric redshift estimation using generalized linear models
2014-08-24 HLSM Hierarchical latent space network model (HLSM)
2014-08-24 mkde 2D and 3D movement-based kernel density estimates (MKDEs)
2014-08-24 RsimMosaic R Simple IMage Mosaic creation library
2014-08-24 sonicLength Estimating Abundance of Clones from DNA fragmentation data
2014-08-23 AMOEBA A Multidirectional Optimum Ecotope-Based Algorithm
2014-08-23 bigRR Generalized Ridge Regression (with special advantage for p >> n cases)
2014-08-23 labeling Axis Labeling
2014-08-23 mosaicData Project MOSAIC (mosaic-web.org) data sets
2014-08-23 mppa Statistics for analysing multiple simultaneous point processes on the real line
2014-08-23 pauwels2014 Bayesian Experimental Design for Systems Biology
2014-08-23 survAccuracyMeasures Estimate accuracy measures for risk prediction markers from survival data
2014-08-22 bdsmatrix Routines for Block Diagonal Symmetric matrices
2014-08-22 qualityTools Statistical Methods for Quality Science
2014-08-22 scaRabee Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models
2014-08-22 scholar Analyse citation data from Google Scholar
2014-08-22 wpp2012 World Population Prospects 2012
2014-08-22 xlsxjars Package required POI jars for the xlsx package
2014-08-21 childsds Calculation of standard deviation scores adduced from different growth standards
2014-08-21 EpiDynamics Dynamic Models in Epidemiology
2014-08-21 mvnfast Fast multivariate normal methods
2014-08-21 sensory Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization (PEM) algorithm
2014-08-21 SocialNetworks Generates social networks based on distance
2014-08-21 TableToLongForm TableToLongForm
2014-08-20 CCTpack Cultural Consensus Theory applications to data
2014-08-20 matpow matrix powers
2014-08-20 mokken Mokken Scale Analysis in R
2014-08-19 DStree Recursive Partitioning for Discrete-Time Survival Trees
2014-08-19 extlasso Maximum penalized likelihood estimation with extended lasso penalty
2014-08-19 FD Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology
2014-08-19 laeken Estimation of indicators on social exclusion and poverty
2014-08-19 RcmdrPlugin.EcoVirtual Rcmdr EcoVirtual Plugin
2014-08-19 rite The Right Editor to Write R
2014-08-19 TukeyC Conventional Tukey Test
2014-08-18 BayesX R Utilities Accompanying the Software Package BayesX
2014-08-18 bigmemory.sri A shared resource interface for Bigmemory Project packages
2014-08-18 mvrtn Mean and Variance of Truncated Normal Distribution
2014-08-18 PhyActBedRest Marks periods of sleep in Actigraph accelerometer data
2014-08-17 classify Classification Accuracy and Consistency under IRT models
2014-08-17 gglasso Group Lasso Penalized Learning Using A Unified BMD Algorithm
2014-08-17 LPmerge Merging linkage maps by linear programming
2014-08-16 EcoVirtual Simulation of Ecological Models
2014-08-16 ELT ELT - A package to build Experience Life Tables
2014-08-16 planar Multilayer optics
2014-08-16 RGoogleAnalytics R Wrapper for the Google Analytics API
2014-08-16 RootsExtremaInflections Finds roots, extrema and inflection points of a curve
2014-08-16 snpar Supplementary Non-parametric Statistics Methods
2014-08-15 COUNT Functions, data and code for count data
2014-08-15 CVTuningCov Regularized Estimators of Covariance Matrices with CV Tuning
2014-08-15 gCat Graph-based two-sample tests for categorical data
2014-08-15 phtt Panel Data Analysis with Heterogeneous Time Trends
2014-08-15 pycno Pycnophylactic Interpolation
2014-08-15 rprintf Adaptive builder for formatted strings
2014-08-15 rtype A strong type system for R
2014-08-15 semPlot Path diagrams and visual analysis of various SEM packages' output
2014-08-15 survey analysis of complex survey samples
2014-08-14 AntWeb programmatic interface to the AntWeb
2014-08-14 CBPS R Package for Covariate Balancing Propensity Score
2014-08-14 fastGHQuad Fast Rcpp implementation of Gauss-Hermite quadrature
2014-08-14 hmmm hierarchical multinomial marginal models
2014-08-14 RFLPtools Tools to analyse RFLP data
2014-08-14 trimTrees Trimmed opinion pools of trees in a random forest
2014-08-14 XLConnectJars JAR dependencies for the XLConnect package
2014-08-13 BlandAltmanLeh Plots (slightly extended) Bland-Altman plots
2014-08-13 dicionariosIBGE Dictionaries for reading microdata surveys from IBGE
2014-08-13 growthrate Bayesian reconstruction of growth velocity
2014-08-13 LEAPFrOG Likelihood Estimation of Admixture in Parents From Offspring Genotypes
2014-08-13 linkcomm Tools for Generating, Visualizing, and Analysing Link Communities in Networks
2014-08-13 ReporteRsjars External jars required for package ReporteRs
2014-08-13 tvd Total Variation Denoising
2014-08-12 astrodatR Astronomical Data
2014-08-12 cAIC4 Conditional Akaike information criterion for lme4
2014-08-12 cramer Multivariate nonparametric Cramer-Test for the two-sample-problem
2014-08-12 lfstat Calculation of Low Flow Statistics for daily stream flow data
2014-08-12 random.polychor.pa A Parallel Analysis With Polychoric Correlation Matrices
2014-08-12 RLRsim Exact (Restricted) Likelihood Ratio tests for mixed and additive models
2014-08-12 twostageTE Two-Stage Threshold Estimation
2014-08-12 Xmisc Xiaobei's miscellaneous classes and functions
2014-08-11 hdi High-Dimensional Inference
2014-08-11 ibeemd Irregular-lattice based ensemble empirical mode decomposition
2014-08-11 lgtdl A set of methods for longitudinal data objects
2014-08-11 MALDIquantForeign Import/Export routines for MALDIquant
2014-08-11 MicroDatosEs Utilities for Official Spanish Microdata
2014-08-11 threeboost Thresholded variable selection and prediction based on estimating equations
2014-08-11 vartors Transform Definition of Variables to R Scripts
2014-08-11 wfe Weighted Linear Fixed Effects Regression Models for Causal Inference
2014-08-10 alleHap Allele simulation and Haplotype reconstruction from pedigree databases
2014-08-10 hglasso Learning graphical models with hubs
2014-08-10 RWebLogo plotting custom sequence logos
2014-08-10 tiger TIme series of Grouped ERrors
2014-08-10 UScancer Create US cancer datasets from SEER, IARC, and US Census data
2014-08-10 vrtest Variance Ratio tests and other tests for Martingale Difference Hypothesis
2014-08-09 astrolibR Astronomy Users Library
2014-08-09 CHAT Clonal Heterogeneity Analysis Tool
2014-08-09 dglars Differential Geometric LARS (dgLARS) method
2014-08-09 distr Object oriented implementation of distributions
2014-08-09 ecipex Efficient calculation of fine structure isotope patterns via Fourier transforms of simplex-based elemental models
2014-08-09 muhaz Hazard Function Estimation in Survival Analysis
2014-08-09 NScluster Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models
2014-08-09 SnowballC Snowball stemmers based on the C libstemmer UTF-8 library
2014-08-09 SNSequate Standard and Nonstandard Statistical Models and Methods for Test Equating
2014-08-09 sybilcycleFreeFlux cycle-Free Flux balance analysis: Efficient removal of thermodynamically infeasible cycles from metabolic flux distributions
2014-08-08 itertools2 itertools2: Functions creating iterators for efficient looping
2014-08-08 LDRTools Tools for Linear Dimension Reduction
2014-08-08 portes Portmanteau Tests for Univariate and Multivariate Time Series Models
2014-08-08 rgp R genetic programming framework
2014-08-08 RTriangle Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
2014-08-08 SpatialPack Package for analysis of spatial data
2014-08-06 BioMark Find biomarkers in two-class discrimination problems
2014-08-06 federalregister Client package for the U.S. Federal Register API
2014-08-06 heatmapFit Fit statistic for binary dependent variable models
2014-08-06 klaR Classification and visualization
2014-08-06 osDesign Design and analysis of observational studies
2014-08-06 rje Miscellaneous useful functions
2014-08-05 dave Functions for "Data Analysis in Vegetation Ecology"
2014-08-05 dendroextras Extra functions to cut, label and colour dendrogram clusters
2014-08-05 dlnm Distributed Lag Non-linear Models
2014-08-05 EMMIXuskew Fitting Unrestricted Multivariate Skew t Mixture Models
2014-08-05 expp Spatial analysis of extra-pair paternity
2014-08-05 hmm.discnp Hidden Markov models with discrete non-parametric observation distributions
2014-08-05 SDMTools Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises
2014-08-04 breakaway Species richness estimation and modelling
2014-08-04 ChemometricsWithR Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences
2014-08-04 nloptr R interface to NLopt
2014-08-04 symmoments Symbolic central and noncentral moments of the multivariate normal distribution
2014-08-03 interAdapt interAdapt
2014-08-03 PottsUtils Utility Functions of the Potts Models
2014-08-03 rPython Package allowing R to call Python
2014-08-03 sanitizers C/C++ source code to trigger Address and Undefined Behaviour Sanitizers
2014-08-03 statfi statfi R tools
2014-08-02 CerioliOutlierDetection Outlier detection using the iterated RMCD method of Cerioli (2010)
2014-08-02 MGRASTer API Client for the MG-RAST Server of the US DOE KBase
2014-08-02 xlsx Read, write, format Excel 2007 and Excel 97/2000/XP/2003 files
2014-08-01 ic.infer Inequality constrained inference in linear normal situations
2014-08-01 LinearizedSVR Linearized Support Vector Regression
2014-08-01 optiscale Optimal scaling
2014-08-01 subgroup Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials
2014-07-31 agsemisc Miscellaneous plotting and utility functions
2014-07-31 bayou Bayesian fitting of Ornstein-Uhlenbeck models to phylogenies
2014-07-31 FrF2 Fractional Factorial designs with 2-level factors
2014-07-31 GeoDE A geometrical Approach to Differential expression and gene-set enrichment
2014-07-31 RefFreeEWAS EWAS using reference-Free DNA methylation mixture deconvolution
2014-07-31 SAPP Statistical Analysis of Point Processes
2014-07-31 timsac TIMe Series Analysis and Control package
2014-07-30 btf Estimates univariate function via Bayesian trend filtering
2014-07-30 codep Multiscale Codependence Analysis
2014-07-30 CRF CRF - Conditional Random Fields
2014-07-30 ExceedanceTools Confidence regions for exceedance sets and contour lines
2014-07-30 rareGE Testing Gene-Environment Interaction for Rare Genetic Variants
2014-07-29 hasseDiagram Drawing Hasse diagram
2014-07-29 NeatMap Non-clustered heatmap alternatives
2014-07-29 rorutadis Robust Ordinal Regression UTADIS
2014-07-28 cosinor Tools for estimating and predicting the cosinor model
2014-07-28 cplexAPI R Interface to C API of IBM ILOG CPLEX
2014-07-28 cvxclustr Splitting methods for convex clustering
2014-07-28 drfit Dose-response data evaluation
2014-07-28 gmp Multiple Precision Arithmetic
2014-07-28 LowRankQP Low Rank Quadratic Programming
2014-07-28 ltbayes Simulation-Based Bayesian Inference for Latent Traits of Item Response Models
2014-07-28 RJSONIO Serialize R objects to JSON, JavaScript Object Notation
2014-07-28 rYoutheria Access to the YouTheria mammal trait database
2014-07-27 GrapheR A multi-platform GUI for drawing customizable graphs in R
2014-07-26 dcmr Attribute profile estimation using Diagnostic Classification Models and MCMC
2014-07-26 DiscML DiscML: An R package for estimating evolutionary rates of discrete characters using maximum likelihood
2014-07-26 infotheo Information-Theoretic Measures
2014-07-26 stsm.class Class and Methods for Structural Time Series Models
2014-07-25 AppliedPredictiveModeling Functions and Data Sets for 'Applied Predictive Modeling'
2014-07-25 inTrees Interpret Tree Ensembles
2014-07-25 nicheROVER (Niche) (R)egion and Niche (Over)lap Metrics for Multidimensional Ecological Niches
2014-07-25 phylin Spatial interpolation of genetic data
2014-07-25 Rankcluster Model-based clustering for multivariate partial ranking data
2014-07-25 TreeSimGM Simulating Phylogenetic Trees under a General Model
2014-07-24 imguR Imgur API Client Package for R
2014-07-24 ManyTests Multiple testing procedures of Cox (2011) and Wang and Cox (2007)
2014-07-24 mtk Mexico ToolKit library (MTK)
2014-07-24 RItools Randomization inference tools
2014-07-24 sensitivitymw Sensitivity analysis using weighted M-statistics
2014-07-24 spuRs Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R"
2014-07-24 ssh.utils Local and remote system commands with output and error capture
2014-07-24 tables Formula-driven table generation
2014-07-23 CAvariants Correspondence Analysis Variants
2014-07-23 Epi A package for statistical analysis in epidemiology
2014-07-23 hglm.data Data for The hglm Package
2014-07-23 ReorderCluster Reordering the dendrogram according to the class labels
2014-07-23 rnaseqWrapper Wrapper for several R packages and scripts to automate RNA-seq analysis
2014-07-22 babynames US baby names 1880-2013
2014-07-22 fueleconomy EPA fuel economy data
2014-07-22 glasso Graphical lasso- estimation of Gaussian graphical models
2014-07-22 leapp latent effect adjustment after primary projection
2014-07-22 MDPtoolbox Markov Decision Processes toolbox
2014-07-22 mewAvg A Fixed Memeory Moving Expanding Window Average
2014-07-22 nasaweather Collection of datasets from the ASA 2006 data expo
2014-07-22 nontargetData Quantized simulation data of isotope pattern centroids
2014-07-22 nycflights13 Data about flights departing NYC in 2013
2014-07-22 RMRAINGEN RMRAINGEN (R Multi-site RAINfall GENeretor): a package to generate daily time series of rainfall from monthly mean values
2014-07-22 SPACECAP A Program to Estimate Animal Abundance and Density using Bayesian Spatially-Explicit Capture-Recapture Models
2014-07-22 splusTimeDate Times and Dates from S-PLUS
2014-07-21 BayesLogit Logistic Regression
2014-07-21 densityClust Clustering by fast search and find of density peaks
2014-07-21 gamm4 Generalized additive mixed models using mgcv and lme4
2014-07-21 GeoGenetix Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2014-07-21 ineq Measuring Inequality, Concentration, and Poverty
2014-07-21 msme Functions and Datasets for "Methods of Statistical Model Estimation"
2014-07-21 SuperLearner Super Learner Prediction
2014-07-20 gWidgetstcltk Toolkit implementation of gWidgets for tcltk package
2014-07-20 ProgGUIinR support package for "Programming Graphical User Interfaces in R"
2014-07-20 SBRect Detecting structural breaks using rectangle covering (non-parametric method)
2014-07-19 permGPU permPGU: Using GPUs in Statistical Genomics
2014-07-19 RGtk2 R bindings for Gtk 2.8.0 and above
2014-07-19 slp Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers
2014-07-19 TEQR Target Equivalence Range Design
2014-07-18 bezier Bezier Curve and Spline Toolkit
2014-07-18 mem Moving Epidemic Method R Package
2014-07-18 siRSM Single-Index Response Surface Models
2014-07-17 mvcwt Wavelet analysis of multiple time series
2014-07-17 nscancor Non-Negative and Sparse CCA
2014-07-17 nsprcomp Non-Negative and Sparse PCA
2014-07-17 randomForest Breiman and Cutler's random forests for classification and regression
2014-07-16 functional Curry, Compose, and other higher-order functions
2014-07-16 GCAI.bias Guided Correction Approach for Inherited bias (GCAI.bias)
2014-07-16 hillmakeR Perform occupancy analysis
2014-07-16 phaseR Phase Plane Analysis of One and Two Dimensional Autonomous ODE Systems
2014-07-16 translate Bindings for the Google Translate API v2
2014-07-15 ParallelForest Random Forest Classification with Parallel Computing
2014-07-15 quad Exact permutation moments of quadratic form statistics
2014-07-15 ROSE ROSE: Random Over-Sampling Examples
2014-07-15 synchrony Methods for computing spatial, temporal, and spatiotemporal statistics
2014-07-14 IDPSurvival Imprecise Dirichlet Process for Survival Analysis
2014-07-14 regress Gaussian linear models with linear covariance structure
2014-07-12 IAT Functions to use with data from the Implicit Association Test
2014-07-12 r4ss R code for Stock Synthesis
2014-07-11 popKorn For interval estimation of mean of selected populations
2014-07-11 refund.wave Wavelet-Domain Regression with Functional Data
2014-07-11 tth TeX to HTML/MathML Translators tth/ttm
2014-07-10 CondReg Condition Number Regularized Covariance Estimation
2014-07-10 COSINE COndition SpecIfic sub-NEtwork
2014-07-10 metafolio Metapopulation simulations for conserving salmon through portfolio optimization
2014-07-10 pRSR Test of periodicity using response surface regression
2014-07-10 robustvarComp Robust Estimation of Variance Component Models
2014-07-10 rysgran Grain size analysis, textural classifications and distribution of unconsolidated sediments
2014-07-10 surv2sampleComp Inference for model-free between-group parameters for censored survival data
2014-07-09 crossReg Confidence intervals for crossover points of two simple regression lines
2014-07-09 translateR Bindings for the Google and Microsoft Translation APIs
2014-07-08 EvoRAG Evolutionary Rates Across Gradients
2014-07-08 RmixmodCombi Combining Mixture Components for Clustering
2014-07-08 sievetest Sieve test reporting functions
2014-07-08 sms Spatial Microsimulation
2014-07-07 MCAvariants Multiple Correspondence Analysis Variants
2014-07-07 plotSEMM Graphing nonlinear latent variable interactions in SEMM
2014-07-07 readODS Read ODS files and puts them into data frames
2014-07-06 rkvo Read Key/Value Pair Observations
2014-07-05 eive An algorithm for reducing errors-in-variable bias in simple linear regression
2014-07-05 ForIT Functions from the 2nd Italian Forest Inventory (INFC)
2014-07-05 Thinknum Thinknum Data Connection
2014-07-05 tm.plugin.factiva Import articles from Factiva using the tm text mining framework
2014-07-04 CompGLM Conway-Maxwell-Poisson GLM and distribution functions
2014-07-04 rinat Access iNaturalist data through APIs
2014-07-04 SOD SOD for multidimensional scaling
2014-07-03 Bayesianbetareg Bayesian Beta regression: joint mean and precision modeling
2014-07-03 CarletonStats Functions For Statistics Classes At Carleton College
2014-07-03 fwi.fbp Fire Weather Index System and Fire Behaviour Prediction System Calculations
2014-07-03 mcc Moment Corrected Correlation
2014-07-03 morse MOdelling tools for Reproduction and Survival data in Ecotoxicology
2014-07-03 movMF Mixtures of von Mises-Fisher Distributions
2014-07-03 qualCI Causal Inference with Qualitative and Ordinal Information on Outcomes
2014-07-02 FunctionalNetworks An algorithm for gene and gene set network inference
2014-07-02 hSDM hierarchical Bayesian species distribution models
2014-07-02 LogConcDEAD Log-concave Density Estimation in Arbitrary Dimensions
2014-07-02 MAVTgsa Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest
2014-07-02 PolyPatEx Paternity exclusion in autopolyploid species
2014-07-02 PSAboot Bootstrapping for Propensity Score Analysis
2014-07-02 spatial.tools R functions for working with spatial data
2014-07-02 SpatialTools Tools for spatial data analysis
2014-07-01 Rcplex R interface to CPLEX
2014-07-01 scoring Proper scoring rules
2014-07-01 subsemble An Ensemble Method for Combining Subset-Specific Algorithm Fits
2014-07-01 sudoku Sudoku Puzzle Generator and Solver
2014-06-30 CORM The Clustering of Regression Models Method
2014-06-30 GenBinomApps Clopper-Pearson Confidence Interval and Generalized Binomial Distribution
2014-06-30 rococo RObust rank COrrelation COefficient and test
2014-06-30 stressr Fetch and plot financial stress index and component data
2014-06-29 BANOVA Hierarchical Bayesian ANOVA Models
2014-06-28 np Nonparametric kernel smoothing methods for mixed data types
2014-06-28 stosim Stochastic Simulator for Reliability Modeling of Repairable Systems
2014-06-27 cond Approximate conditional inference for logistic and loglinear models
2014-06-27 icensmis Study Design and Data Analysis in the presence of error-prone diagnostic tests and self-reported outcomes
2014-06-27 rforensicbatwing BATWING for calculating forensic trace-suspect match probabilities
2014-06-26 CovSel Model-Free Covariate Selection
2014-06-26 dgmb dgmb Simulating data for PLS structural models
2014-06-26 ezsim provide an easy to use framework to conduct simulation
2014-06-26 pedigreemm Pedigree-based mixed-effects models
2014-06-26 RelValAnalysis Relative Value Analysis
2014-06-26 sp23design Design and Simulation of seamless Phase II-III Clinical Trials
2014-06-25 antitrust Antitrust Library
2014-06-25 dagbag Learning directed acyclic graphs (DAGs) through bootstrap aggregating
2014-06-25 ngram An n-gram Babbler
2014-06-25 nlsMicrobio Nonlinear regression in predictive microbiology
2014-06-25 SocialMediaMineR A Social Media Search and Analytic Tool
2014-06-24 bingat Binary Graph Analysis Tools
2014-06-24 bst Gradient Boosting
2014-06-24 bujar Buckley-James Regression for Survival Data with High-Dimensional Covariates
2014-06-24 EasyStrata Evaluation of stratified genome-wide association meta-analysis results
2014-06-24 FisHiCal Iterative FISH-based Calibration of Hi-C Data
2014-06-24 InventorymodelPackage Inventorymodel
2014-06-24 LS2Wstat A Multiscale Test of Spatial Stationarity for LS2W processes
2014-06-24 matlab MATLAB emulation package
2014-06-24 optR Optimization Toolbox for solving linear systems
2014-06-24 RWBP Detects spatial outliers using a Random Walk on Bipartite Graph
2014-06-24 rwt Rice Wavelet Toolbox wrapper
2014-06-24 sampleSelection Sample Selection Models
2014-06-24 weatherData Get Weather Data from the Web
2014-06-23 rClinicalCodes R tools for integrating with the www.clinicalcodes.org repository
2014-06-22 eegAnalysis Tools for analysis and classification of electroencephalography (EEG) data
2014-06-22 pbdNCDF4 Programming with Big Data – Interface to Parallel Unidata NetCDF4 Format Data Files
2014-06-22 TaoTeProgramming Illustrations from Tao Te Programming
2014-06-21 aemo Download and process AEMO price and demand data
2014-06-21 bcpmeta Bayesian Multiple Changepoint Detection Using Metadata
2014-06-21 ConnMatTools Tools for working with connectivity matrices
2014-06-21 copulaedas Estimation of Distribution Algorithms Based on Copulas
2014-06-21 funreg funreg (Functional Regression for Irregularly Timed Data)
2014-06-20 parallelMCMCcombine Methods for combining independent subset Markov chain Monte Carlo (MCMC) posterior samples to estimate a posterior density given the full data set
2014-06-19 CommunityCorrelogram Ecological Community Correlogram
2014-06-19 hazus Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters
2014-06-18 fmri Analysis of fMRI experiments
2014-06-18 iGasso Genetic association tests and utilities
2014-06-18 localsolver R API to LocalSolver
2014-06-18 OmicKriging OmicKriging for Phenotypic Prediction
2014-06-17 clogitL1 Fitting exact conditional logistic regression with lasso and elastic net penalties
2014-06-17 cmprsk Subdistribution Analysis of Competing Risks
2014-06-17 KernSmoothIRT Nonparametric Item Response Theory
2014-06-17 tictoc Functions for timing R scripts, as well as implementations of Stack and List structures
2014-06-17 TreatmentSelection Evaluate Treatment Selection Biomarkers
2014-06-16 arnie "Arnie" box office records 1982-2014
2014-06-16 RI2by2 Randomization inference for treatment effects on a binary outcome
2014-06-15 RSKC Robust sparse K-means
2014-06-15 tm.plugin.dc Text Mining Distributed Corpus Plug-In
2014-06-15 xhmmScripts XHMM R scripts
2014-06-14 babel Ribosome profiling data analysis
2014-06-14 rbitcoinchartsapi R Package for the BitCoinCharts.com API
2014-06-14 table1xls Produces summary tables and exports them to multi-tab spreadsheet format (.xls or .xlsx)
2014-06-13 AssetPricing Optimal pricing of assets with fixed expiry date
2014-06-13 DeducerText Deducer GUI for Text Data
2014-06-13 ElstonStewart Elston-Stewart Algorithm
2014-06-13 ESGtoolkit Toolkit for the simulation of financial assets and interest rates models
2014-06-13 PCDSpline Semiparametric regression analysis of panel count data using monotone splines
2014-06-13 ReliabilityTheory Tools for structural reliability analysis
2014-06-13 wordcloud Word Clouds
2014-06-12 CopyDetect Computing Statistical Indices to Detect Answer Copying on Multiple-Choice Tests
2014-06-12 faraway Functions and datasets for books by Julian Faraway
2014-06-12 flip Multivariate Permutation Tests
2014-06-12 qVarSel Variables Selection for Clustering and Classification
2014-06-12 RXMCDA An XMCDA parser for R
2014-06-12 ustyc Fetch US Treasury yield curve data
2014-06-12 yaml Methods to convert R data to YAML and back
2014-06-11 mice Multivariate Imputation by Chained Equations
2014-06-11 R.cache Fast and light-weight caching (memoization) of objects and results to speed up computations
2014-06-11 tm.plugin.alceste Import texts from files in the Alceste format using the tm text mining framework
2014-06-11 tm.plugin.mail Text Mining E-Mail Plug-In
2014-06-10 gsmoothr Smoothing tools
2014-06-10 HiCseg Detection of domains in HiC data
2014-06-10 ICsurv A package for semiparametric regression analysis of interval-censored data
2014-06-10 ORCI Several confidence intervals for the odds ratio
2014-06-10 popdemo Provides Tools For Demographic Modelling Using Projection Matrices
2014-06-10 qmap Statistical transformations for post-processing climate model output
2014-06-10 rlme Rank-based Estimation and Prediction in Random Effects Nested Models
2014-06-10 SCI Standardized Climate Indices such as SPI, SRI or SPEI
2014-06-09 IsoCI Confidence intervals for current status data based on transformations and bootstrap
2014-06-09 MCMCglmm MCMC Generalised Linear Mixed Models
2014-06-09 primerTree primerTree
2014-06-08 synlik Synthetic Likelihood methods for intractable likelihoods
2014-06-07 compositions Compositional Data Analysis
2014-06-07 Cubist Rule- and Instance-Based Regression Modeling
2014-06-07 genasis Global ENvironmental ASsessment Information System (GENASIS) computational tools
2014-06-07 Interact Tests for marginal interactions in a 2 class response model
2014-06-07 kobe Tools for the provision of scientific fisheries management advice
2014-06-07 PortRisk Portfolio Risk Analysis
2014-06-07 Rmalschains Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R
2014-06-06 memgene Spatial pattern detection in genetic distance data using Moran's Eigenvector Maps
2014-06-06 tweedie Tweedie exponential family models
2014-06-05 AR1seg Segmentation of an autoregressive Gaussian process of order 1
2014-06-05 SpatialEpi Methods and Data for Spatial Epidemiology
2014-06-05 vbsr Variational Bayes Spike Regression Regularized Linear Models
2014-06-04 ChargeTransport Charge Transfer Rates and Charge Carrier Mobilities
2014-06-04 kequate The kernel method of test equating
2014-06-04 rsdepth Ray Shooting Depth (i.e. RS Depth) functions for bivariate analysis
2014-06-04 sas7bdat SAS Database Reader (experimental)
2014-06-03 ebSNP Genotyping and SNP calling using single-sample next generation sequencing data
2014-06-03 popgraph This is an R package that constructs and manipulates population graphs
2014-06-02 dissUtils Utilities for making pairwise comparisons of multivariate data
2014-06-02 Mposterior Mposterior: R package for Robust and Scalable Bayes via a Median of Subset Posterior Measures
2014-06-02 orloca The package deals with Operations Research LOCational Analysis models
2014-06-02 rHealthDataGov Retrieve data sets from the HealthData.gov data API
2014-06-01 rmetasim An individual-based population genetic simulation environment
2014-05-31 lasso2 L1 constrained estimation aka ‘lasso’
2014-05-31 pbo Probability of Backtest Overfitting
2014-05-31 ripa R Image Processing and Analysis
2014-05-31 rplotengine R as a plotting engine
2014-05-31 STPGA Selection of Training Populations by Genetic Algorithm
2014-05-31 taRifx.geo Collection of various spatial functions
2014-05-30 interventionalDBN Interventional Inference for Dynamic Bayesian Networks
2014-05-30 kdetrees Nonparametric method for identifying discordant phylogenetic trees
2014-05-30 mstate Data preparation, estimation and prediction in multi-state models
2014-05-30 qcr Quality control and reliability
2014-05-30 SensitivityCaseControl Sensitivity Analysis for Case-Control Studies
2014-05-29 bootruin A bootstrap test for the probability of ruin in the classical risk process
2014-05-29 LearnBayes Functions for Learning Bayesian Inference
2014-05-29 pairwise Rasch Model Parameters by Pairwise Algorithm
2014-05-29 taRifx Collection of utility and convenience functions
2014-05-28 harvestr A Parallel Simulation Framework
2014-05-28 ivlewbel Uses heteroscedasticity to estimate mismeasured and endogenous regressor models
2014-05-28 ordBTL Modelling comparison data with ordinal response
2014-05-28 seg A set of tools for measuring spatial segregation
2014-05-28 SINGLE Estimate sparse dynamic graphs using the Smooth Incremental Graphical Lasso Estimation (SINGLE) algorithm
2014-05-27 bbmle Tools for general maximum likelihood estimation
2014-05-27 bmmix Bayesian multinomial mixture
2014-05-27 metagen Inference in Meta Analysis and Meta Regression
2014-05-26 PBD Protracted birth-death model of diversification
2014-05-26 pbdPROF Programming with Big Data — MPI Profiling Tools
2014-05-26 SRRS The Stepwise Response Refinement Screener (SRRS)
2014-05-23 alphashape3d Implementation of the 3D alpha-shape for the reconstruction of 3D sets from a point cloud
2014-05-23 Modalclust Hierarchical Modal Clustering
2014-05-23 OrgMassSpecR Organic Mass Spectrometry
2014-05-23 rpart.utils Tools for parsing and manipulating rpart objects, including generating machine readable rules
2014-05-23 tsbridge Calculate normalising constants for Bayesian time series models
2014-05-23 ucbthesis UC Berkeley graduate division thesis template
2014-05-22 BCE Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data
2014-05-22 nmcdr Non-parametric Multiple Change-points Detection
2014-05-22 treecm Centre of mass assessment and consolidation of trees
2014-05-21 KRLS Kernel-based Regularized Least squares (KRLS)
2014-05-21 monomvn Estimation for multivariate normal and Student-t data with monotone missingness
2014-05-21 Rmpi Interface (Wrapper) to MPI (Message-Passing Interface)
2014-05-21 spatial.gev.bma Hierarchical spatial generalized extreme value (GEV) modeling with Bayesian Model Averaging (BMA)
2014-05-20 prefmod Utilities to fit paired comparison models for preferences
2014-05-20 ResourceSelection Resource Selection (Probability) Functions for Use-Availability Data
2014-05-19 cubfits Codon Usage Bias Fits
2014-05-19 GRTo Tools for the analysis of Gutenberg-Richter distributions of earthquake magnitudes
2014-05-19 hawkes Hawkes process simulation and calibration toolkit
2014-05-19 MASSTIMATE Body Mass Estimation Equations for Vertebrates
2014-05-19 PVAClone Population Viability Analysis with Data Cloning
2014-05-19 sharx Models and Data Sets for the Study of Species-Area Relationships
2014-05-18 cladoRcpp C++ implementations of phylogenetic cladogenesis calculations
2014-05-18 cstar Substantive significance testing for regression estimates and marginal effects
2014-05-18 Hankel Univariate non-parametric two-sample test based on empirical Hankel transforms
2014-05-18 MC2toPath Translates information from netcdf files with MC2 output into inter-PVT transitions
2014-05-18 robust Robust Library
2014-05-17 boostr A modular framework to bag or boost any estimation procedure
2014-05-17 gambin Fit the GamBin model to species abundance distributions
2014-05-17 micEconAids Demand Analysis with the Almost Ideal Demand System (AIDS)
2014-05-16 bigrf Big Random Forests: Classification and Regression Forests for Large Data Sets
2014-05-16 detect Analyzing Wildlife Data with Detection Error
2014-05-16 dynia Fit Dynamic Intervention Model
2014-05-16 FGN Fractional Gaussian Noise and power law decay time series model fitting
2014-05-16 geiger Analysis of evolutionary diversification
2014-05-16 mefa4 Multivariate Data Handling with S4 Classes and Sparse Matrices
2014-05-16 mvctm Multivariate Variance Components Tests for Multilevel Data
2014-05-16 pbapply Adding Progress Bar to '*apply' Functions
2014-05-16 PBSddesolve Solver for Delay Differential Equations
2014-05-16 QRM Provides R-language Code to Examine Quantitative Risk Management Concepts
2014-05-16 Skillings.Mack The Skillings-Mack test Statistic for block designs with missing observations
2014-05-15 DoubleExpSeq Differential Exon Usage Test for RNA-Seq data via Empirical Bayes Shrinkage of the Dispersion Parameter
2014-05-14 ALDqr Quantile Regression Using Asymmetric Laplace Distribution
2014-05-14 erpR Event-related potentials (ERP) analysis, graphics and utility functions
2014-05-14 hydroApps Tools and models for hydrological applications
2014-05-14 imputeR A General Imputation Framework in R
2014-05-14 phyloTop Phylogenetic Tree Topological Properties Evaluator
2014-05-14 pkgmaker Package development utilities
2014-05-14 rvHPDT Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees
2014-05-14 shp2graph Convert a SpatialLinesDataFrame object to a "igraph-class" object
2014-05-13 cutoffR CUTOFF: A Spatio-temporal Imputation Method
2014-05-13 dynatopmodel Implementation of the Dynamic TOPMODEL hydrological model
2014-05-13 samplingEstimates Sampling Estimates
2014-05-13 samplingVarEst Sampling Variance Estimation
2014-05-12 finiteruinprob Computation of the probability of ruin within a finite time horizon
2014-05-12 stilt Separable Gaussian Process Interpolation (Emulation)
2014-05-11 siplab Spatial individual-plant modelling
2014-05-11 TFMPvalue Efficient and accurate P-value computation for Position Weight Matrices
2014-05-10 recalls Access U.S. Federal Government Recall Data
2014-05-10 rSCA An R Package for Stepwise Cluster Analysis
2014-05-09 akmeans Adaptive Kmeans algorithm based on threshold
2014-05-09 msap Statistical analysis for Methylation-sensitive Amplification Polymorphism data
2014-05-08 fishMod Fits Poisson-sum-of-Gammas GLMs, Tweedie GLMs, and delta log-normal mdoels
2014-05-08 iRepro Reproducibility for Interval-Censored Data
2014-05-08 PPtree Projection pursuit classification tree
2014-05-08 ProfessR Grades Setting and Exam Maker
2014-05-08 psgp Projected Spatial Gaussian Process (psgp) methods
2014-05-08 rbundler Rbundler manages an application's dependencies systematically and repeatedly
2014-05-07 bdvis Biodiversity Data Visualizations
2014-05-07 CALIBERrfimpute Multiple imputation using MICE and Random Forest
2014-05-07 Dominance ADI (average dominance index), social network graphs with dual directions, and music notation graph
2014-05-07 freestats Statistical algorithms used in common data mining course
2014-05-07 futile.matrix Random matrix generation and manipulation
2014-05-07 genSurv Generating multi-state survival data
2014-05-07 glm2 Fitting Generalized Linear Models
2014-05-07 gplm Generalized partial linear models (GPLM)
2014-05-07 metap Meta-analysis of significance values
2014-05-07 noncensus U.S. Census Regional and Demographic Data
2014-05-07 PCGSE Principal Component Gene Set Enrichment
2014-05-07 tawny Provides various portfolio optimization strategies including random matrix theory and shrinkage estimators
2014-05-06 bandit Functions for simple A/B split test and multi-armed bandit analysis
2014-05-06 FLR Fuzzy Logic Rule Classifier
2014-05-06 KappaV Calculates "vectorial Kappa", an index of congruence between patchy mosaics
2014-05-06 networkreporting Tools for using network reporting estimators
2014-05-06 RcmdrPlugin.MPAStats R Commander Plug-in for MPA Statistics
2014-05-06 tawny.types Common types for tawny
2014-05-05 dams Dams in the United States from the National Inventory of Dams (NID)
2014-05-05 MCMC.OTU Bayesian analysis of multivariate counts data
2014-05-05 truncSP Semi-parametric estimators of truncated regression models
2014-05-05 wtcrsk Competing risks regression models with covariate-adjusted censoring weight
2014-05-04 endorse R Package for Analyzing Endorsement Experiments
2014-05-04 hydrogeo Groundwater data presentation and interpretation
2014-05-03 sglr An R package for power and boundary calculations in pre-licensure vaccine trials using a sequential generalized likelihood ratio test
2014-05-03 spatialprobit Spatial Probit Models
2014-05-02 BalancedSampling Balanced and spatially balanced sampling
2014-05-02 benchmark Benchmark Experiments Toolbox
2014-05-02 GeneFeST Bayesian calculation of gene-specific FST from genomic SNP data
2014-05-02 HK80 Conversion Tools for HK80 Geographical Coordinate System
2014-05-02 irtProb Utilities and Probability Distributions Related to Multidimensional Person Item Response Models
2014-05-02 NominalLogisticBiplot Biplot representations of categorical data
2014-05-02 rcppbugs R binding for cppbugs
2014-05-02 RcppSMC Rcpp bindings for Sequential Monte Carlo
2014-05-01 benford.analysis Benford Analysis for data validation and forensic analytics
2014-05-01 dynsurv Dynamic models for survival data
2014-05-01 MultiCNVDetect Multiple Copy Number Variation Detection
2014-05-01 nplplot Plotting linkage and association results
2014-05-01 ocean Biophysical Oceanography Tools
2014-05-01 PTE Personalized Treatment Evaluator
2014-04-30 CMPControl Control Charts for Conway-Maxwell-Poisson Distribution
2014-04-30 DAAG Data Analysis And Graphics data and functions
2014-04-30 Deducer Deducer: A data analysis GUI for R
2014-04-30 lar History of labour relations package
2014-04-30 pdfCluster Cluster analysis via nonparametric density estimation
2014-04-30 robustHD Robust methods for high-dimensional data
2014-04-30 SoilR Models of Soil Organic Matter Decomposition
2014-04-29 bayesDem Graphical User Interface for bayesTFR, bayesLife and bayesPop
2014-04-29 bbefkr Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density
2014-04-29 hierNet A Lasso for Hierarchical Interactions
2014-04-29 MBA Multilevel B-spline Approximation
2014-04-29 uniReg Unimodal penalized spline regression using B-splines
2014-04-28 EasyMARK Utility functions for working with mark-recapture data
2014-04-28 GGEBiplotGUI GGEBiplotGUI: Interactive GGE Biplots in R
2014-04-28 mcheatmaps Multiple matrices heatmap visualization
2014-04-28 pxR PC-Axis with R
2014-04-28 TcGSA Time-course Gene Set Analysis
2014-04-27 plusser A Google+ Interface for R
2014-04-27 QCA3 Yet another package for Qualitative Comparative Analysis
2014-04-26 HistData Data sets from the history of statistics and data visualization
2014-04-26 Rpdb Read, write, visualize and manipulate PDB files
2014-04-25 chemCal Calibration functions for analytical chemistry
2014-04-25 DandEFA Dandelion Plot for R-mode Exploratory Factor Analysis
2014-04-25 DynClust Denoising and clustering for dynamical image sequence (2D or 3D)+T
2014-04-25 flux Flux rate calculation from dynamic closed chamber measurements
2014-04-25 ICEbox Individual Conditional Expectation Plot Toolbox
2014-04-25 RSvgDevice An R SVG graphics device
2014-04-24 binhf Haar-Fisz functions for binomial data
2014-04-24 clusterfly Explore clustering interactively using R and GGobi
2014-04-24 EvCombR Evidence Combination in R
2014-04-24 falcon Finding Allele-specific Copy Number in Next-Generation Sequencing Data
2014-04-24 MILC MIcrosimulation Lung Cancer (MILC) model
2014-04-24 polywog Bootstrapped Basis Regression with Oracle Model Selection
2014-04-24 rggobi Interface between R and GGobi
2014-04-24 rpubchem rpubchem - Interface to the PubChem Collection
2014-04-24 sand Statistical Analysis of Network Data with R
2014-04-23 classifly Explore classification models in high dimensions
2014-04-23 meifly Interactive model exploration using GGobi
2014-04-23 micEconCES Analysis with the Constant Elasticity of Substitution (CES) function
2014-04-23 packHV A few useful functions for statisticians
2014-04-23 reshape Flexibly reshape data
2014-04-23 SNPassoc SNPs-based whole genome association studies
2014-04-22 apmsWAPP Pre- and Postprocessing for AP-MS data analysis based on spectral counts
2014-04-22 crackR Probabilistic damage tolerance analysis for fatigue cracking of metallic aerospace structures
2014-04-22 DIFlasso A penalty approach to Differential Item Functioning in Rasch Models
2014-04-22 dynamicTreeCut Methods for detection of clusters in hierarchical clustering dendrograms
2014-04-22 IQCC Improved Quality Control Charts
2014-04-22 kcirt k-Cube Thurstonian IRT Models
2014-04-22 memoise Memoise functions
2014-04-22 micEcon Microeconomic Analysis and Modelling
2014-04-22 micEconSNQP Symmetric Normalized Quadratic Profit Function
2014-04-22 profr An alternative display for profiling information
2014-04-22 quipu Summary charts of micro satellite profiles for a set of biological samples
2014-04-22 R2STATS A GTK GUI for fitting and comparing GLM and GLMM in R
2014-04-21 GSAgm Gene Set Analysis using the Gamma Method
2014-04-19 RApiSerialize R API Serialization
2014-04-19 Reol R interface to the Encyclopedia of Life
2014-04-19 RTextureMetrics Functions for calculation of texture metrics for Grey Level Co-occurrence Matrices
2014-04-19 rWBclimate A package for accessing World Bank climate data
2014-04-18 AnthropMMD A GUI for Mean Measures of Divergence
2014-04-18 bayesQR Bayesian quantile regression
2014-04-18 Bclim Bayesian Palaeoclimate Reconstruction from Pollen
2014-04-18 regRSM Random Subspace Method (RSM) for linear regression
2014-04-17 ATmet Advanced Tools for Metrology
2014-04-17 ModelMap Creates Random Forest and Stochastic Gradient Boosting Models, and applies them to GIS .img files to build detailed prediction maps
2014-04-17 MSQC Multivariate Statistical Quality Control
2014-04-17 poisson.glm.mix Fit high dimensional mixtures of Poisson GLMs
2014-04-16 bigalgebra BLAS routines for native R matrices and big.matrix objects
2014-04-16 mizer Multi-species sIZE spectrum modelling in R
2014-04-16 PropCIs Various confidence interval methods for proportions
2014-04-16 simboot Simultaneous inference for diversity indices
2014-04-15 Blaunet Calculate and Analyze Blau statuses for measuring social distance
2014-04-15 Johnson Johnson Transformation
2014-04-15 NBPSeq Negative Binomial Models for RNA-Sequencing Data
2014-04-15 RGIFT Create quizzes in GIFT Format
2014-04-15 scar Shape-Constrained Additive Regression: a Maximum Likelihood Approach
2014-04-15 scio Sparse Column-wise Inverse Operator
2014-04-14 AMORE A MORE flexible neural network package
2014-04-14 DivE Diversity Estimator
2014-04-14 LOGICOIL LOGICOIL: multi-state prediction of coiled-coil oligomeric state
2014-04-14 pumilioR Pumilio in R
2014-04-13 compound.Cox Regression estimation based on the compound covariate method under the Cox proportional hazard model
2014-04-13 hydroPSO Particle Swarm Optimisation, with focus on Environmental Models
2014-04-13 RcppBDT Rcpp bindings for the Boost Date_Time library
2014-04-13 SensoMineR Sensory data analysis with R
2014-04-12 BootPR Bootstrap Prediction Intervals and Bias-Corrected Forecasting
2014-04-12 earlywarnings Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries
2014-04-12 fastM Fast Computation of Multivariate M-estimators
2014-04-12 Rcsdp R interface to the CSDP semidefinite programming library
2014-04-11 foreach Foreach looping construct for R
2014-04-11 gRapfa Acyclic Probabilistic Finite Automata
2014-04-11 iterators Iterator construct for R
2014-04-11 rvTDT population control weighted rare-variants TDT
2014-04-10 archetypes Archetypal Analysis
2014-04-10 grt General Recognition Theory
2014-04-10 ora Convenient Tools for Working with Oracle Databases
2014-04-09 bit A class for vectors of 1-bit booleans
2014-04-09 cuttlefish.model An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model
2014-04-09 ff memory-efficient storage of large data on disk and fast access functions
2014-04-09 GHQp Gauss Hermite Quadrature with pruning
2014-04-09 PBSadmb ADMB for R Using Scripts or GUI
2014-04-09 spsmooth spsmooth: An Extension Package for 'mgcv'
2014-04-09 ThreeWay Three-way component analysis
2014-04-08 bcrm Bayesian continual reassessment method (CRM) designs for Phase I dose-finding trials
2014-04-08 coxphw Weighted Estimation in Cox Regression
2014-04-08 smoothHR Smooth Hazard Ratio Curves taking a Reference Value
2014-04-07 disclap Discrete Laplace Exponential Family
2014-04-07 MMS Fixed effects Selection in Linear Mixed Models
2014-04-07 tuneR Analysis of music and speech
2014-04-05 acss.data Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method)
2014-04-05 argparse Command line optional and positional argument parser
2014-04-05 bbemkr Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error
2014-04-05 isotonic.pen Penalized Isotonic Regression in one and two dimensions
2014-04-05 nonrandom Stratification and matching by the propensity score
2014-04-04 EcoHydRology A community modeling foundation for Eco-Hydrology
2014-04-04 ERP Significance analysis of Event-Related Potentials data
2014-04-04 fts R interface to tslib (a time series library in c++)
2014-04-04 palinsol Insolation for palaeoclimate studies
2014-04-03 csampling Functions for Conditional Simulation in Regression-Scale Models
2014-04-03 doRedis Foreach parallel adapter for the rredis package
2014-04-03 findpython Python tools to find an acceptable python binary
2014-04-03 marg Approximate marginal inference for regression-scale models
2014-04-03 Methplot Visualize the methylation patterns
2014-04-03 nlreg Higher Order Inference for Nonlinear Heteroscedastic Models
2014-04-03 pcg Preconditioned Conjugate Gradient Algorithm for solving Ax=b
2014-04-03 rDVR The rDVR package allows you to start stop and save a video server from within R
2014-04-03 TrackReconstruction Reconstruct animal tracks from magnetometer, accelerometer, depth and optional speed data
2014-04-02 fifer A collection of miscellaneous functions
2014-04-02 kimisc Kirill's miscellaneous functions
2014-04-02 lpint Local polynomial estimators of intensity function or its derivatives
2014-04-02 OAIHarvester Harvest Metadata Using OAI-PMH v2.0
2014-04-02 rankhazard Rank-hazard plots
2014-04-02 slam Sparse Lightweight Arrays and Matrices
2014-04-01 tosls Instrumental Variables Two Stage Least Squares estimation
2014-03-31 evdbayes Bayesian Analysis in Extreme Value Theory
2014-03-31 r2d2 Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution
2014-03-31 sparsediscrim Sparse and Regularized Discriminant Analysis
2014-03-31 WrightMap Wright Map: IRT item-person map with ConQuest integration
2014-03-30 partsm Periodic Autoregressive Time Series Models
2014-03-30 TunePareto Multi-objective parameter tuning for classifiers
2014-03-28 aCRM Convenience functions for analytical Customer Relationship Management
2014-03-28 EMA Easy Microarray data Analysis
2014-03-28 FacPad Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment
2014-03-28 fanovaGraph Building Kriging models from FANOVA graphs
2014-03-28 FinTS Companion to Tsay (2005) Analysis of Financial Time Series
2014-03-28 GraphPCA GraphPCA, Graphical tools of histogram PCA
2014-03-28 invGauss Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data
2014-03-28 MMMS Multi-Marker Molecular Signature for Treatment-specific Subgroup Identification
2014-03-28 pdmod Proximal/distal modeling framework for Pavlovian conditioning phenomena
2014-03-28 polyaAeppli Implementation of the Polya-Aeppli distribution
2014-03-27 iFad An integrative factor analysis model for drug-pathway association inference
2014-03-27 synchronicity Boost mutex functionality for R
2014-03-26 Rphylip An R interface for PHYLIP
2014-03-26 SubLasso Gene selection using Lasso for Microarray data with user-defined genes fixed in model
2014-03-25 clValid Validation of Clustering Results
2014-03-25 CMF Collective matrix factorization
2014-03-25 Devore7 Data sets from Devore's "Prob and Stat for Eng (7th ed)"
2014-03-25 gRain Graphical Independence Networks
2014-03-25 ivfixed Instrumental fixed effect panel data model
2014-03-25 mcga Machine coded genetic algorithms for real-valued optimization problems
2014-03-24 ccgarch Conditional Correlation GARCH models
2014-03-24 CCpop One and two locus GWAS of binary phenotype with case-control-population design
2014-03-24 lsdv Least square dummy variable regression
2014-03-24 OutlierDC Outlier Detection using quantile regression for Censored Data
2014-03-23 freqparcoord Novel Methods for Parallel Coordinates
2014-03-22 BiDimRegression Calculates the bidimensional regression between two 2D configurations
2014-03-22 dna Differential Network Analysis
2014-03-22 fbati Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
2014-03-22 kintone kintone REST client package for R
2014-03-22 RND Risk Neutral Density Extraction Package
2014-03-21 caschrono Séries temporelles avec R - Méthodes et cas
2014-03-21 MARSS Multivariate Autoregressive State-Space Modeling
2014-03-21 PwrGSD Power in a Group Sequential Design
2014-03-21 Rmixmod An interface for MIXMOD
2014-03-21 Stack Stylized concatenation of data.frames or ffdfs
2014-03-20 AmpliconDuo Statistical Analysis Of Amplicon Data Of The Same Sample To Identify Artefacts
2014-03-20 deepnet deep learning toolkit in R
2014-03-20 gIPFrm Generalized Iterative Proportional Fitting for Relational Models
2014-03-20 Paneldata Linear models for panel data
2014-03-20 pspearman Spearman's rank correlation test
2014-03-19 BIPOD BIPOD (Bayesian Inference for Partially Observed diffusions)
2014-03-19 fontcm Computer Modern font for use with extrafont package
2014-03-19 PKreport A reporting pipeline for checking population pharmacokinetic model assumption
2014-03-19 PoisNor Simultaneous generation of multivariate data with Poisson and normal marginals
2014-03-19 resemble Regression and similarity evaluation for memory-based learning in spectral chemometrics
2014-03-18 brainR Helper functions to misc3d and rgl packages for brain imaging
2014-03-18 comato Analysis of Concept Maps
2014-03-18 RSDA RSDA - R to Symbolic Data Analysis
2014-03-18 tractor.base A package for reading, manipulating and visualising magnetic resonance images
2014-03-17 date Functions for handling dates
2014-03-17 EBS Exact Bayesian Segmentation
2014-03-17 IPMpack Builds and analyses Integral Projection Models (IPMs)
2014-03-17 plot3Drgl Plotting multi-dimensional data - using rgl
2014-03-17 semiArtificial Generator of semi-artificial data
2014-03-17 uplift Uplift Modeling
2014-03-16 darch Package for deep architectures and Restricted-Bolzmann-Machines
2014-03-15 plot2groups Plot scatter points for two groups of values
2014-03-15 sbioPN sbioPN: Simulation of deterministic and stochastic spatial biochemical reaction networks using Petri Nets
2014-03-15 ssmrob Robust estimation and inference in sample selection models
2014-03-14 gof Model-diagnostics based on cumulative residuals
2014-03-14 pensim Simulation of high-dimensional data and parallelized repeated penalized regression
2014-03-14 qtlnet Causal Inference of QTL Networks
2014-03-14 rgauges R wrapper to Gaug.es API
2014-03-14 solr General purpose R interface to Solr
2014-03-14 ykmeans K-means using a target variable
2014-03-13 doSNOW Foreach parallel adaptor for the snow package
2014-03-13 PharmPow Pharmacometric Power calculations for mixed study designs
2014-03-12 binomlogit Efficient MCMC for Binomial Logit Models
2014-03-12 gmt Interface between GMT Map-Making Software and R
2014-03-12 itertools Iterator Tools
2014-03-12 LIStest Tests of independence based on the Longest Increasing Subsequence
2014-03-12 normtest Tests for Normality
2014-03-12 plotMCMC MCMC Diagnostic Plots
2014-03-12 reportr A general message and error reporting system
2014-03-12 scape Statistical Catch-at-Age Plotting Environment
2014-03-12 sparsenet Fit sparse linear regression models via nonconvex optimization
2014-03-11 MEMSS Data sets from Mixed-effects Models in S
2014-03-11 mlmRev Examples from Multilevel Modelling Software Review
2014-03-11 SASmixed Data sets from "SAS System for Mixed Models"
2014-03-10 hqmisc Miscellaneous convenience functions and dataset
2014-03-10 hrr Horizontal rule for the R language
2014-03-10 metRology Support for metrological applications
2014-03-10 pt Computational models for prospect theory and other theories of risky decision making
2014-03-10 relax relax – R Editor for Literate Analysis and lateX
2014-03-10 ss3sim Fisheries stock assessment simulation testing with Stock Synthesis
2014-03-10 XML2R EasieR XML data collection
2014-03-09 BurStFin Burns Statistics Financial
2014-03-09 gpairs gpairs: The Generalized Pairs Plot
2014-03-09 gRapHD Efficient selection of undirected graphical models for high-dimensional datasets
2014-03-09 regsubseq Detect and Test Regular Sequences and Subsequences
2014-03-09 spatialsegregation Segregation measures for multitype spatial point patterns
2014-03-09 tmle Targeted Maximum Likelihood Estimation
2014-03-08 gSeg Graph-Based Change-Point Detection (g-Segmentation)
2014-03-07 CPHshape Find the maximum likelihood estimator of the shape constrained hazard baseline and the effect parameters in the Cox proportional hazards model
2014-03-07 doRNG Generic Reproducible Parallel Backend for foreach Loops
2014-03-07 geneSignatureFinder A Gene-signatures finder tools
2014-03-07 gptk Gaussian Processes Tool-Kit
2014-03-07 Jmisc Julian Miscellaneous Function
2014-03-07 Momocs Shape Analysis of Outlines
2014-03-07 RMediation An R Package for Mediation Analysis Confidence Intervals
2014-03-07 SixSigma Six Sigma Tools for Quality and Process Improvement
2014-03-07 svd Interfaces to various state-of-art SVD and eigensolvers
2014-03-07 svyPVpack A package for complex surveys including plausible values
2014-03-07 VBLPCM Variational Bayes Latent Position Cluster Model for networks
2014-03-06 bdpv Inference and design for predictive values in binary diagnostic tests
2014-03-06 covreg A simultaneous regression model for the mean and covariance
2014-03-06 eiwild Ecological Inference with individual and aggregate data
2014-03-06 flowfield Forecasts future values of a univariate time series
2014-03-06 mixRasch Mixture Rasch Models with JMLE
2014-03-06 multiDimBio Multivariate Analysis and Visualization for Biological Data
2014-03-06 MultiOrd Generation of multivariate ordinal variates
2014-03-06 polySegratio Simulate and test marker dosage for dominant markers in autopolyploids
2014-03-06 polySegratioMM Bayesian mixture models for marker dosage in autopolyploids
2014-03-06 rngtools Utility functions for working with Random Number Generators
2014-03-06 rrBLUP Ridge regression and other kernels for genomic selection
2014-03-05 aws Adaptive Weights Smoothing
2014-03-05 awsMethods Class and Methods definitions for packages aws, adimpro, fmri, dwi
2014-03-05 bagRboostR Ensemble bagging and boosting classifiers
2014-03-05 expectreg Expectile and Quantile Regression
2014-03-05 FDRreg False discovery rate regression
2014-03-05 hbim Hill/Bliss Independence Model for Combination Vaccines
2014-03-05 inarmix Mixture models for longitudinal count data
2014-03-05 picante R tools for integrating phylogenies and ecology
2014-03-05 StatRank Statistical Rank Aggregation: Inference, Evaluation, and Visualization
2014-03-04 bigpca PCA, transpose and multicore functionality for big.matrix objects
2014-03-04 bioPN Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets
2014-03-04 factorplot factorplot
2014-03-04 insol Solar Radiation
2014-03-04 ridge Ridge Regression with automatic selection of the penalty parameter
2014-03-04 sesem Spatially explicit structural equation modeling
2014-03-04 Table1Heatmap Table 1 Heatmap
2014-03-04 weights Weighting and Weighted Statistics
2014-03-03 bestglm Best Subset GLM
2014-03-03 ICGE Estimation of number of clusters and identification of atypical units
2014-03-03 RADami R Package for Phylogenetic Analysis of RADseq Data
2014-03-03 simFrame Simulation framework
2014-03-03 SSsimple State space models
2014-03-03 svIDE SciViews GUI API - IDE and code editor functions
2014-03-03 widals Weighting by Inverse Distance with Adaptive Least Squares for Massive Space-Time Data
2014-03-02 optimbase R port of the Scilab optimbase module
2014-03-02 partitionMetric Compute a distance metric between two partitions of a set
2014-03-02 pastecs Package for Analysis of Space-Time Ecological Series
2014-03-02 SciViews SciViews GUI API - Main package
2014-03-02 svDialogstcltk SciViews GUI API - Dialog boxes using Tcl/Tk
2014-03-02 svGUI SciViews GUI API - Functions to manage GUIs
2014-03-02 svHttp SciViews GUI API - R HTTP server
2014-03-02 svMisc SciViews GUI API - Miscellaneous functions
2014-03-02 svSocket SciViews GUI API - R Socket Server
2014-03-02 svTools SciViews GUI API - Tools (wrapper for packages tools and codetools)
2014-03-02 svUnit SciViews GUI API - Unit testing
2014-03-02 svWidgets SciViews GUI API - Widgets & Windows
2014-03-02 zooimage Analysis of numerical zooplankton images
2014-03-01 aqr Interface methods to use with an ActiveQuant Master Server
2014-03-01 BaSTA A package for estimating age-specific survival from incomplete capture-recapture/recovery data
2014-03-01 CoImp Copula based imputation method
2014-03-01 mcll Monte Carlo Local Likelihood Estimation
2014-02-28 anchors Statistical analysis of surveys with anchoring vignettes
2014-02-28 bPeaks bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes
2014-02-28 doMC Foreach parallel adaptor for the multicore package
2014-02-28 doParallel Foreach parallel adaptor for the parallel package
2014-02-28 huge High-dimensional Undirected Graph Estimation
2014-02-28 morgenstemning Color schemes compatible with red-green color perception difficulties
2014-02-28 rpanel Simple interactive controls for R using the tcltk library
2014-02-27 cts Continuous Time Autoregressive Models
2014-02-27 GDELTtools Download, slice, and normalize GDELT data
2014-02-27 isocir Isotonic Inference for Circular data
2014-02-27 ndl Naive Discriminative Learning
2014-02-27 panelAR Estimation of Linear AR(1) Panel Data Models with Cross-Sectional Heteroskedasticity and/or Correlation
2014-02-26 ALKr Generate Age-Length Keys for fish populations
2014-02-26 pencopula Flexible Copula Density Estimation with Penalized Hierarchical B-Splines
2014-02-26 reutils Talk to the NCBI EUtils
2014-02-26 rvgtest Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators
2014-02-26 scrypt scrypt key derivation functions for R
2014-02-26 seas Seasonal analysis and graphics, especially for climatology
2014-02-26 snp.plotter snp.plotter
2014-02-25 CTT Classical Test Theory Functions
2014-02-25 HMMpa Analysing accelerometer data using hidden Markov models
2014-02-25 saemix Stochastic Approximation Expectation Maximization (SAEM) algorithm
2014-02-25 SimuChemPC Simulation process of 4 selection methods in predicting chemical potent compounds
2014-02-24 biom An interface package (beta) for the BIOM file format
2014-02-24 FinCal Time Value of Money, time series analysis and Computational Finance
2014-02-24 fractaldim Estimation of fractal dimensions
2014-02-24 gridBase Integration of base and grid graphics
2014-02-24 lmodel2 Model II Regression
2014-02-24 msir Model-based Sliced Inverse Regression
2014-02-24 MSwM Fitting Markov Switching Models
2014-02-24 mvc Multi-View Clustering
2014-02-24 RegClust Cluster analysis via regression coefficients
2014-02-24 RYoudaoTranslate R package provide functions to translate English words into Chinese
2014-02-24 StableEstim Estimate the 4 parameters of stable law using different methods
2014-02-24 tabplot Tableplot, a visualization of large datasets
2014-02-23 eeptools Convenience functions for education data
2014-02-23 EMMIXcontrasts Contrasts in mixed effects for EMMIX model with random effects
2014-02-23 growcurves Bayesian semi and nonparametric growth curve models that additionally include multiple membership random effects
2014-02-23 psData A package to download regularly maintained political science data sets and make commonly used, but infrequently updated variables based on this data
2014-02-22 blender Analyze biotic homogenization of landscapes
2014-02-22 bursts Markov model for bursty behavior in streams
2014-02-22 hcci Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap)
2014-02-22 lavaan.survey Complex survey Structural Equation Modeling (SEM)
2014-02-22 plumbr Mutable and dynamic data models
2014-02-21 arf3DS4 Activated Region Fitting, fMRI data analysis (3D)
2014-02-21 clere CLERE methodology for simultaneous variables clustering and regression
2014-02-21 dynlm Dynamic Linear Regression
2014-02-21 eulerian eulerian: A package to find eulerian paths from graphs
2014-02-21 longCatEDA Package for Plotting Categorical Longitudinal and Time-Series Data
2014-02-21 lpmodeler Modeler for linear programs (LP) and mixed integer linear programs (MILP)
2014-02-21 ncdf4.helpers Helper functions for use with the ncdf4 package
2014-02-21 RDieHarder R interface to the dieharder RNG test suite
2014-02-21 SPAr Perform rare variants association analysis based on summation of partition approaches
2014-02-21 TTAinterfaceTrendAnalysis Temporal Trend Analysis Graphical Interface
2014-02-21 zendeskR Zendesk API Wrapper
2014-02-20 ARTP Gene and Pathway p-values computed using the Adaptive Rank Truncated Product
2014-02-20 denstrip Density strips and other methods for compactly illustrating distributions
2014-02-20 DiagTest3Grp Diagnostic test summary measures for three ordinal groups
2014-02-20 diffusionMap Diffusion map
2014-02-20 diversitree diversitree: comparative phylogenetic analyses of diversification
2014-02-20 lorec LOw Rand and sparsE Covariance matrix estimation
2014-02-20 mixreg Functions to fit mixtures of regressions
2014-02-20 OLScurve OLS growth curve trajectories
2014-02-20 restorepoint Debugging with restore points
2014-02-20 RFreak R/FrEAK interface
2014-02-19 mGSZ Gene set analysis based on GSZ-scoring function and asymptotic p-value
2014-02-18 pbdDEMO Programming with Big Data – Demonstrations of pbd Packages
2014-02-18 rfisheries R interface for fisheries data
2014-02-17 bshazard Nonparametric Smoothing of the Hazard Function
2014-02-17 edeR Email Data Extraction Using R
2014-02-17 grppenalty Concave 1-norm and 2-norm group penalty in linear and logistic regression
2014-02-17 praktikum Kvantitatiivsete meetodite praktikumi asjad / Functions used in the course "Quantitative methods in behavioural sciences" (SHPH.00.004), University of Tartu
2014-02-17 RcmdrPlugin.pointG Graphical POINT of view for questionnaire data Rcmdr Plug-In
2014-02-17 turner Turn vectors and lists of vectors into indexed structures
2014-02-17 YPmodel The Short-term and Long-term Hazard Ratio Model for Survival Data
2014-02-16 DTComPair Comparison of Binary Diagnostic Tests in a Paired Study Design
2014-02-16 sdtoolkit Scenario Discovery Tools to Support Robust Decision Making
2014-02-15 CRAC Cosmology R Analysis Code
2014-02-14 prospectr Miscellaneous functions for processing and sample selection of vis-NIR diffuse reflectance data
2014-02-14 surface Fitting Hansen Models to Investigate Convergent Evolution
2014-02-13 KATforDCEMRI Kinetic analysis and visualization of DCE-MRI data
2014-02-13 rsae Robust Small Area Estimation
2014-02-13 wrspathrow Functions for working with Worldwide Reference System (WRS)
2014-02-12 bio.infer Predict environmental conditions from biological observations
2014-02-12 ecosim Toolbox for Aquatic Ecosystem Modeling
2014-02-12 expm Matrix exponential
2014-02-12 mcr Method Comparison Regression
2014-02-12 MLCM Maximum Likelihood Conjoint Measurement
2014-02-12 packdep Mapping dependencies among R packages
2014-02-12 QCGWAS Quality Control of Genome Wide Association Study results
2014-02-12 SAM Sparse Additive Modelling
2014-02-12 wrspathrowData Data used by the wrspathrow package
2014-02-11 bfa Bayesian Factor Analysis
2014-02-11 chromoR Analysis of chromosomal interactions data (correction, segmentation and comparison)
2014-02-11 dlmodeler Generalized Dynamic Linear Modeler
2014-02-11 frair Functional response analysis in R
2014-02-11 HMMCont Hidden Markov Model for Continuous Observations Processes
2014-02-11 phenex Auxiliary functions for phenological data analysis
2014-02-11 schwartz97 A package on the Schwartz two-factor commodity model
2014-02-10 FKF Fast Kalman Filter
2014-02-10 npst Generalization of Hewitt's Seasonality Test
2014-02-09 soc.ca Specific correspondence analysis for the social sciences
2014-02-09 XNomial Exact Goodness-Of-Fit Test For Multinomial Data With Fixed Probabilities
2014-02-08 FAiR Factor Analysis in R
2014-02-08 phyreg Implements the Phylogenetic Regression of Grafen (1989)
2014-02-07 cpca Methods to perform Common Principal Component Analysis (CPCA)
2014-02-07 gpr A Minimalistic package to apply Gaussian Process in R
2014-02-07 networkDynamicData dynamic network datasets
2014-02-07 Ruchardet R package to detect character encoding
2014-02-07 SYNCSA SYNCSA - Analysis of functional and phylogenetic patterns in metacommunities
2014-02-06 easynls Easy nonlinear model
2014-02-06 VecStatGraphs2D Vector analysis using graphical and analytical methods in 2D
2014-02-05 paf Attributable Fraction Function for Censored Survival Data
2014-02-05 StrainRanking Ranking of pathogen strains
2014-02-04 depmixS4 Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4
2014-02-04 hydroGOF Goodness-of-fit functions for comparison of simulated and observed hydrological time series
2014-02-03 MetABEL Meta-analysis of genome-wide SNP association results
2014-02-03 pmclust Parallel Model-Based Clustering
2014-02-02 optimsimplex R port of the Scilab optimsimplex module
2014-02-01 SCBmeanfd Simultaneous Confidence Bands for the Mean of Functional Data
2014-02-01 vbdm Variational Bayes Discrete Mixture Model
2014-01-31 bqtl Bayesian QTL mapping toolkit
2014-01-31 EMD Empirical Mode Decomposition and Hilbert Spectral Analysis
2014-01-31 fdaMixed Functional data analysis in a mixed model framework
2014-01-31 gdalUtils Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities
2014-01-31 jackstraw Non-parametric Jackstraw for Principal Component Analysis
2014-01-31 loe Local Ordinal Embedding
2014-01-31 naturalsort Natural Ordering
2014-01-31 Pomic Pomic
2014-01-31 rgam Robust Generalized Additive Model
2014-01-31 SBSA Simplified Bayesian Sensitivity Analysis
2014-01-30 mmeta Multivariate Meta-Analysis
2014-01-30 pSI Specificity Index Statistic
2014-01-30 VariABEL Testing of genotypic variance heterogeneity to detect potentially interacting SNP
2014-01-29 fdasrvf Elastic Functional Data Analysis
2014-01-29 lazyData A LazyData Facility
2014-01-29 VoxR Metrics extraction of trees from T-LiDAR data
2014-01-28 CVcalibration Estimation of the Calibration Equation with Error-in Observations
2014-01-28 RapidPolygonLookup Polygon lookup using kd trees
2014-01-28 Rramas Matrix population models
2014-01-28 SGP An R Package for the Calculation and Visualization of Student Growth Percentiles & Percentile Growth Trajectories
2014-01-27 dualScale Dual Scaling Analysis of Multiple Choice Data
2014-01-27 ebal Entropy reweighting to create balanced samples
2014-01-27 MergeGUI A GUI for Merging Datasets in R
2014-01-27 Synth Synthetic Control Group Method for Comparative Case Studies
2014-01-26 sqliter Connection wrapper to SQLite databases
2014-01-25 gnmf Generalized Non-negative Matrix Factorization Based on Renyi Divergence
2014-01-25 irlba Fast partial SVD by implicitly-restarted Lanczos bidiagonalization
2014-01-25 PEMM A Penalized EM algorithm incorporating missing-data mechanism
2014-01-25 RWiener Wiener process distribution functions
2014-01-24 gconcord Concord method for Graphical Model Selection
2014-01-24 LSC Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data
2014-01-23 correlate Multivariate Data Generation by Permutation
2014-01-23 cSFM Covariate-adjusted Skewed Functional Model (cSFM)
2014-01-23 gitter an R package for quantification of pinned microbial culture
2014-01-23 hydroTSM Time series management, analysis and interpolation for hydrological modelling
2014-01-23 interval Weighted Logrank Tests and NPMLE for interval censored data
2014-01-23 irtoys Simple interface to the estimation and plotting of IRT models
2014-01-23 jpeg Read and write JPEG images
2014-01-23 msos Datasets and Functions used in Multivariate Statistics: Old School by John Marden
2014-01-23 pedantics Functions to facilitate power and sensitivity analyses for genetic studies of natural populations
2014-01-23 saws Small-Sample Adjustments for Wald tests Using Sandwich Estimators
2014-01-23 sigclust Statistical Significance of Clustering
2014-01-22 acs Download, manipulate, and present data from the US Census American Community Survey
2014-01-22 BayesSingleSub Computation of Bayes factors for interrupted time-series designs
2014-01-22 Gammareg classic gamma regression: joint modeling of mean and shape parameters
2014-01-22 psyphy Functions for analyzing psychophysical data in R
2014-01-22 RAMpath Structural Equation Modeling using the reticular action model (RAM) Notation
2014-01-22 rateratio.test Exact rate ratio test
2014-01-21 gvlma Global Validation of Linear Models Assumptions
2014-01-21 truncnorm Truncated normal distribution
2014-01-21 useful A collection of handy, useful functions
2014-01-20 AOfamilies Aranda-Ordaz (AO) transformation families
2014-01-20 HUM compute HUM value and visualize ROC curves
2014-01-20 SGPdata Exemplar data sets for SGP analyses
2014-01-19 blockmatrix blockmatrix: Tools to solve algebraic systems with partitioned matrices
2014-01-19 cda Coupled dipole approximation of light scattering by clusters of nanoparticles
2014-01-19 IBHM Approximation using the IBHM method
2014-01-19 ldbounds Lan-DeMets Method for Group Sequential Boundaries
2014-01-19 mfx Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs
2014-01-19 RHRV Heart rate variability analysis of ECG data
2014-01-19 RTextTools Automatic Text Classification via Supervised Learning
2014-01-19 simexaft simexaft
2014-01-19 WeightedCluster Clustering of Weighted Data
2014-01-18 HBSTM Hierarchical Bayesian Space-Time models for Gaussian space-time data
2014-01-17 odfWeave Sweave processing of Open Document Format (ODF) files
2014-01-17 SCORER2 SCORER 2.0: an algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences
2014-01-17 wpp2008 World Population Prospects 2008
2014-01-16 dfexplore Explore data.frames by plotting NA and classes of each variable
2014-01-16 multinbmod Regression analysis of overdispersed correlated count data
2014-01-16 quadrupen Sparsity by Worst-Case Quadratic Penalties
2014-01-16 sm Smoothing methods for nonparametric regression and density estimation
2014-01-15 clustsig Significant Cluster Analysis
2014-01-15 Funclustering A package for functional data clustering
2014-01-15 GWsignif Genome-wide significance for whole genome sequencing studies
2014-01-15 mph Multiscale persistent homology
2014-01-15 OPDOE OPtimal Design Of Experiments
2014-01-15 RAtmosphere Standard Atmospheric profiles
2014-01-14 ICEinfer Incremental Cost-Effectiveness (ICE) Statistical Inference from Two Unbiased Samples
2014-01-14 iDynoR R Analysis package for iDynoMiCS Simulation Results
2014-01-14 linkim Linkage information based genotype imputation method
2014-01-14 RockFab Rock fabric and strain analysis tools
2014-01-14 RXshrink Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression
2014-01-14 sna Tools for Social Network Analysis
2014-01-13 MF Mitigated Fraction
2014-01-13 TimeMachine Time Machine
2014-01-11 DSBayes Bayesian subgroup analysis in clinical trials
2014-01-11 kst Knowledge Space Theory
2014-01-10 citbcmst CIT Breast Cancer Molecular SubTypes Prediction
2014-01-10 citccmst CIT Colon Cancer Molecular SubTypes Prediction
2014-01-10 jointPm Risk estimation using the joint probability method
2014-01-10 networkTomography Tools for network tomography
2014-01-10 plRasch Log Linear by Linear Association models and Rasch family models by pseudolikelihood estimation
2014-01-10 poLCA Polytomous variable Latent Class Analysis
2014-01-09 cwm Cluster Weighted Models by EM algorithm
2014-01-09 dagR R functions for directed acyclic graphs
2014-01-09 gpmap Analysing and plotting genotype-phenotype maps
2014-01-08 CADFtest This package performs the CADF unit root test proposed in Hansen (1995)
2014-01-08 GRaF Species distribution modelling using latent Gaussian random fields
2014-01-08 PGM2 Recursive method for construction of nested resolvable designs and uniform designs associated
2014-01-08 WhatIf WhatIf: Software for Evaluating Counterfactuals
2014-01-07 AdMit Adaptive Mixture of Student-t distributions
2014-01-07 bayesGARCH Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
2014-01-07 rapportools Miscellaneous (stats) helper functions with sane defaults for reporting
2014-01-07 RVowpalWabbit R interface to the Vowpal Wabbit
2014-01-07 shuffle The shuffle estimator for explainable variance
2014-01-07 smatr (Standardised) Major Axis Estimation and Testing Routines
2014-01-07 streamR Access to Twitter Streaming API via R
2014-01-06 FLLat Fused Lasso Latent Feature Model
2014-01-06 oem Orthogonalizing Expectation maximization
2014-01-06 RFOC Graphics for Spherical Distributions and Earthquake Focal Mechanisms
2014-01-06 robcor Robust Correlations
2014-01-06 sfa Stochastic Frontier Analysis
2014-01-06 TeachNet Fits neural networks to learn about back propagation
2014-01-05 glmmGS Gauss-Seidel Generalized Linear Mixed Model solver
2014-01-05 RClimMAWGEN RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather GENeretor): a package to generate time series of climate indices from RMAWGEN generations
2014-01-04 DESnowball Bagging with Distance-based Regression for Differential Gene Expression Analyses
2014-01-04 SWATmodel A multi-OS implementation of the TAMU SWAT model
2014-01-03 AdaptiveSparsity Adaptive Sparsity Models
2014-01-03 compHclust Complementary Hierarchical Clustering
2014-01-03 cosmosR cosmosR
2014-01-03 datalist An R package to convert data sets for import into JAGS, WinBUGS and OpenBUGS and to generate data.frames for predicting the effects of particular variables
2014-01-03 fractal Fractal Time Series Modeling and Analysis
2014-01-03 geozoo Zoo of Geometric Objects
2014-01-03 glmnetcr Fit a penalized constrained continuation ratio model for predicting an ordinal response
2014-01-03 glmpathcr Fit a penalized continuation ratio model for predicting an ordinal response
2014-01-03 qiimer Work with QIIME Output Files in R
2014-01-03 qrfactor Simultaneous simulation of Q and R mode factor analyses with Spatial data
2014-01-02 binom Binomial Confidence Intervals For Several Parameterizations
2014-01-02 BioGeoBEARS BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts
2014-01-02 FAMT Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data
2014-01-02 glmmBUGS Generalised Linear Mixed Models and Spatial Models with WinBUGS, BRugs, or OpenBUGS
2014-01-02 PBImisc A set of datasets used in my classes or in the book ,,Modele liniowe i mieszane w R, wraz z przykladami w analizie danych”
2014-01-02 PedCNV An implementation for association analysis with CNV data
2014-01-02 RCA Relational Class Analysis
2014-01-02 robustgam Robust Estimation for Generalized Additive Models
2014-01-02 VIMGUI Visualization and Imputation of Missing Values
2014-01-02 xts eXtensible Time Series
2014-01-01 mmm an R package for analyzing multivariate longitudinal data with multivariate marginal models
2014-01-01 PLRModels Statistical inference in partial linear regression models
2013-12-31 fitDRC Fitting Density Ratio Classes
2013-12-31 lubridate Make dealing with dates a little easier
2013-12-31 missForest Nonparametric Missing Value Imputation using Random Forest
2013-12-31 mmm2 Multivariate marginal models with shared regression parameters
2013-12-31 texmex Statistical modelling of extreme values
2013-12-31 TiddlyWikiR Create dynamic reports using a TiddlyWiki template
2013-12-30 dtt Discrete Trigonometric Transforms
2013-12-30 financial Solving financial problems in R
2013-12-30 mblm Median-Based Linear Models
2013-12-30 moonsun Basic astronomical calculations with R
2013-12-30 PIGE Self contained gene set analysis for gene- and pathway-environment interaction analysis
2013-12-30 seawaveQ U.S. Geological Survey seawaveQ model
2013-12-30 wmtsa Wavelet Methods for Time Series Analysis
2013-12-29 BiasedUrn Biased Urn model distributions
2013-12-28 acm4r Align-and-Count Method comparisons of RFLP data
2013-12-28 mhurdle Multiple hurdle Tobit models
2013-12-28 pglm panel generalized linear model
2013-12-28 plm Linear Models for Panel Data
2013-12-28 rgabriel Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot
2013-12-27 clustrd Methods for joint dimension reduction and clustering
2013-12-27 extfunnel Additional Funnel Plot Augmentations
2013-12-27 GenABEL genome-wide SNP association analysis
2013-12-27 GenABEL.data Package contains data which is used by GenABEL example and test functions
2013-12-27 mlogit multinomial logit model
2013-12-27 ROC632 Construction of diagnostic or prognostic scoring system and internal validation of its discriminative capacities based on ROC curve and 0.633+ boostrap resampling
2013-12-27 saves Fast load variables
2013-12-27 SIN A SINful Approach to Selection of Gaussian Graphical Markov Models
2013-12-27 spider Species Identity and Evolution in R
2013-12-27 truncreg Truncated Gaussian Regression Models
2013-12-26 cpk Clinical Pharmacokinetics
2013-12-26 mycobacrvR Integrative immunoinformatics for Mycobacterial diseases in R platform
2013-12-25 kmc Kaplan - Meier estimator with constraints for right censored data – a recursive computational algorithm
2013-12-24 evt0 Mean of order p, peaks over random threshold Hill and high quantile estimates
2013-12-24 RcmdrPlugin.sos Efficiently search the R help pages
2013-12-24 safeBinaryRegression Safe Binary Regression
2013-12-24 TSTutorial Fitting and Predict Time Series Interactive Laboratory
2013-12-23 audio Audio Interface for R
2013-12-23 MigClim Implementing dispersal into species distribution models
2013-12-23 SHIP SHrinkage covariance Incorporating Prior knowledge
2013-12-21 JGR JGR - Java GUI for R
2013-12-21 pa Performance Attribution for Equity Portfolios
2013-12-21 pmcgd pmcgd
2013-12-21 RSofia Port of sofia-ml (http://code.google.com/p/sofia-ml/) to R
2013-12-21 XiMpLe A simple XML tree parser and generator
2013-12-20 AdequacyModel Adequacy of probabilistic models and generation of pseudo-random numbers
2013-12-20 ltm Latent Trait Models under IRT
2013-12-20 polytomous Polytomous logistic regression for fixed and mixed effects
2013-12-20 ROCt Time-dependent ROC curve estimation and adaptation to the relative survival context
2013-12-19 AssotesteR Statistical Tests for Genetic Association Studies
2013-12-19 BBRecapture Bayesian Behavioural Capture-Recapture Models
2013-12-19 colortools Tools for colors in a Hue-Saturation-Value (HSV) color model
2013-12-19 minPtest Gene region-level testing procedure for SNP data, using the min P test resampling approach
2013-12-19 TilePlot Characterization of functional genes in complex microbial communities using tiling DNA microarrays
2013-12-18 bvls The Stark-Parker algorithm for bounded-variable least squares
2013-12-18 cellVolumeDist Functions to fit cell volume distributions and thereby estimate cell growth rates and division times
2013-12-18 FindMinIC Find Models with Minimum IC
2013-12-18 HWEBayes Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing
2013-12-18 maxlike Model species distributions by estimating the probability of occurrence using presence-only data
2013-12-18 mvna Nelson-Aalen estimator of the cumulative hazard in multistate models
2013-12-18 PropClust Propensity Clustering and Decomposition
2013-12-18 RAppArmor Interfaces to Linux and AppArmor security methods
2013-12-18 RcmdrPlugin.lfstat Rcmdr Plug-In for low flow analysis
2013-12-18 scalreg Scaled sparse linear regression
2013-12-18 snowfall Easier cluster computing (based on snow)
2013-12-18 VHDClassification Discrimination/Classification in very high dimension with linear and quadratic rules
2013-12-18 wavelets A package of functions for computing wavelet filters, wavelet transforms and multiresolution analyses
2013-12-18 ycinterextra Yield curve or zero-coupon prices interpolation and extrapolation
2013-12-17 Demerelate Functions to calculate relatedness on diploid genetic data
2013-12-17 fBonds Bonds and Interest Rate Models
2013-12-17 fExtremes Rmetrics - Extreme Financial Market Data
2013-12-17 g.data Delayed-Data Packages
2013-12-17 iRefR iRefIndex Manager
2013-12-17 reportRx Tools for automatically generating reproducible clinical report
2013-12-17 spacom Spatially weighted context data for multilevel modelling
2013-12-16 pbdDMAT Programming with Big Data – Distributed Matrix Methods
2013-12-16 RobRSVD Robust Regularized Singular Value Decomposition
2013-12-16 simone Statistical Inference for MOdular NEtworks (SIMoNe)
2013-12-15 fcd Fused Community Detection
2013-12-15 lpc Lassoed principal components for testing significance of features
2013-12-15 MVB Mutivariate Bernoulli log-linear model
2013-12-15 NetSim A Social Networks Simulation Tool in R
2013-12-15 ryouready Companion to the 'R your ready?' book
2013-12-15 svdvisual SVD visualization tools
2013-12-14 DunnettTests Software implementation of step-down and step-up Dunnett test procedures
2013-12-14 EMCluster EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
2013-12-14 fortunes R Fortunes
2013-12-14 ggsubplot Explore complex data by embedding subplots within plots
2013-12-14 MiST Mixed effects Score Test for continuous outcomes
2013-12-14 pbdBASE Programming with Big Data – Base Wrappers for Distributed Matrices
2013-12-14 phyclust Phylogenetic Clustering (Phyloclustering)
2013-12-13 adhoc calculate ad hoc distance thresholds for DNA barcoding identification
2013-12-13 amei Adaptive Management of Epidemiological Interventions
2013-12-13 clusterPower Power calculations for cluster-randomized and cluster-randomized crossover trials
2013-12-13 HIV.LifeTables HIV calibrated model life tables for countries with generalized HIV epidemics
2013-12-13 Kmisc Kevin Miscellaneous
2013-12-13 logconcens Maximum likelihood estimation of a log-concave density based on censored data
2013-12-13 Oncotree Estimating oncogenetic trees
2013-12-13 skda Sparse (Multicategory) Kernel Discriminant Analysis
2013-12-13 survrec Survival analysis for recurrent event data
2013-12-12 BACCO Bayesian Analysis of Computer Code Output (BACCO)
2013-12-12 betapart Partitioning beta diversity into turnover and nestedness components
2013-12-12 dmt Dependency Modeling Toolkit
2013-12-12 gcbd GPU/CPU Benchmarking in Debian-based systems
2013-12-12 languageR Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics"
2013-12-12 mleur Maximum likelihood unit root test
2013-12-12 multitable Simultaneous manipulation of multiple arrays of data, with data.list objects
2013-12-12 Myrrix Interface to Myrrix. Myrrix is a complete, real-time, scalable clustering and recommender system, evolved from Apache Mahout
2013-12-12 QTLRel Tools for mapping of quantitative traits of genetically related individuals and calculating identity coefficients from a pedigree
2013-12-12 rworldmap Mapping global data, vector and raster
2013-12-12 sealasso Standard Error Adjusted Adaptive Lasso
2013-12-12 SeleMix Selective Editing via Mixture models
2013-12-12 untb ecological drift under the UNTB
2013-12-11 aidar Tools for reading AIDA (http://aida.freehep.org/) files into R
2013-12-11 diffractometry Baseline identification and peak decomposition for x-ray diffractograms
2013-12-11 dtw Dynamic time warping algorithms
2013-12-11 etable Easy Table
2013-12-11 ExPosition Exploratory analysis with the singular value decomposition
2013-12-11 giRaph The giRaph package for graph representation in R
2013-12-11 grImport Importing Vector Graphics
2013-12-11 InPosition Inference Tests for ExPosition
2013-12-11 mathgraph Directed and undirected graphs
2013-12-11 mlogitBMA Bayesian Model Averaging for Multinomial Logit Models
2013-12-11 pgs Precision of Geometric Sampling
2013-12-11 prob Elementary Probability on Finite Sample Spaces
2013-12-11 rpartitions Code for integer partitioning
2013-12-11 rspear Calculate SPEARpesticide in R (http://www.systemecology.eu/SPEAR/index.php)
2013-12-11 smfsb SMfSB 2e: Stochastic Modelling for Systems Biology, second edition
2013-12-11 SOAR Memory management in R by delayed assignments
2013-12-11 TExPosition Two-table ExPosition
2013-12-11 TInPosition Inference tests for TExPosition
2013-12-11 wle Weighted Likelihood Estimation
2013-12-10 aylmer A generalization of Fisher's exact test
2013-12-10 Bessel Bessel – Bessel Functions Computations and Approximations
2013-12-10 bfp Bayesian Fractional Polynomials
2013-12-10 binomSamSize Confidence intervals and sample size determination for a binomial proportion under simple random sampling and pooled sampling
2013-12-10 CCM Correlation classification method (CCM)
2013-12-10 cloudUtil Cloud Util Plots
2013-12-10 conics Plot Conics
2013-12-10 corclass Correlational Class Analysis
2013-12-10 CVST Fast Cross-Validation via Sequential Testing
2013-12-10 fTrading Technical Trading Analysis
2013-12-10 fxregime Exchange Rate Regime Analysis
2013-12-10 glmx Generalized Linear Models Extended
2013-12-10 gsl wrapper for the Gnu Scientific Library
2013-12-10 hyperdirichlet A generalization of the Dirichlet distribution
2013-12-10 iBUGS An Interface to WinBUGS/OpenBUGS/JAGS by gWidgets
2013-12-10 mlegp Maximum Likelihood Estimates of Gaussian Processes
2013-12-10 pathmox Pathmox Approach of Segmentation Trees in Partial Least Squares Path Modeling
2013-12-10 prettyGraphs publication-quality graphics
2013-12-10 SII Calculate ANSI S3.5-1997 Speech Intelligibility Index
2013-12-10 sparseLTSEigen RcppEigen back end for sparse least trimmed squares regression
2013-12-10 tdthap TDT tests for extended haplotypes
2013-12-09 calibrator Bayesian calibration of complex computer codes
2013-12-09 DIME DIME (Differential Identification using Mixture Ensemble)
2013-12-09 vrmlgen Generate 3D visualizations for data exploration on the web
2013-12-08 approximator Bayesian prediction of complex computer codes
2013-12-08 discrimARTs Discrimination of Alternative Reproductive Tactics (ARTs)
2013-12-08 zic Bayesian Inference for Zero-Inflated Count Models
2013-12-07 elrm Exact Logistic Regression via MCMC
2013-12-07 hflights Flights that departed Houston in 2011
2013-12-07 sortinghat sortinghat
2013-12-06 assertthat Easy pre and post assertions
2013-12-06 NADA Nondetects And Data Analysis for environmental data
2013-12-05 Brobdingnag Very large numbers in R
2013-12-05 drsmooth Dose-Response Modeling with Smoothing Splines
2013-12-05 DynamicDistribution Dynamically visualized probability distributions and their moments
2013-12-05 hddplot Use known groups in high-dimensional data to derive scores for plots
2013-12-05 MaXact Exact max-type Cochran-Armitage trend test(CATT)
2013-12-05 multivator A multivariate emulator
2013-12-05 ref References for R
2013-12-05 Sample.Size Sample size calculation
2013-12-05 snpStatsWriter Flexible writing of snpStats objects to flat files
2013-12-04 obs.agree An R package to assess agreement between observers
2013-12-03 ADM3 An Interpretation of the ADM method - automated detection algorithm
2013-12-03 ClustOfVar Clustering of variables
2013-12-03 DEMEtics Evaluating the genetic differentiation between populations based on Gst and D values
2013-12-03 ecodist Dissimilarity-based functions for ecological analysis
2013-12-03 Interpol.T Hourly interpolation of multiple temperature daily series
2013-12-03 iplots iPlots - interactive graphics for R
2013-12-03 mefa Multivariate Data Handling in Ecology and Biogeography
2013-12-03 netClass netClass: An R Package for Network-Based Biomarker Discovery
2013-12-03 png Read and write PNG images
2013-12-03 RCassandra R/Cassandra interface
2013-12-02 dvn Access to The Dataverse Network APIs
2013-12-02 GrassmannOptim Grassmann Manifold Optimization
2013-12-02 mRm An R package for conditional maximum likelihood estimation in mixed Rasch models
2013-12-02 OrdNor Concurrent generation of ordinal and normal data with given correlation matrix and marginal distributions
2013-12-02 PoiClaClu Classification and clustering of sequencing data based on a Poisson model
2013-12-02 superMDS Implements the supervised multidimensional scaling (superMDS) proposal of Witten and Tibshirani (2011)
2013-12-01 exptest Tests for Exponentiality
2013-11-30 adephylo adephylo: exploratory analyses for the phylogenetic comparative method
2013-11-29 caper Comparative Analyses of Phylogenetics and Evolution in R
2013-11-29 cycloids cycloids
2013-11-28 aml Adaptive Mixed LASSO
2013-11-28 ergm.userterms User-specified terms for the statnet suite of packages
2013-11-28 LCFdata Data sets for package “LMERConvenienceFunctions”
2013-11-28 ROI R Optimization Infrastructure
2013-11-28 ROI.plugin.glpk ROI-plugin GLPK
2013-11-28 ROI.plugin.quadprog ROI-plugin quadprog
2013-11-28 ROI.plugin.symphony ROI-plugin symphony
2013-11-27 prognosticROC Prognostic ROC curves for evaluating the predictive capacity of a binary test
2013-11-26 asd Simulations for adaptive seamless designs
2013-11-26 hda Heteroscedastic Discriminant Analysis
2013-11-26 LICORS Light Cone Reconstruction of States - Predictive State Estimation From Spatio-Temporal Data
2013-11-25 dils Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links
2013-11-25 FastImputation Learn from training data then quickly fill in missing data
2013-11-25 frontiles Partial Frontier Efficiency Analysis
2013-11-25 humanFormat Human-friendly formatting functions
2013-11-25 intamap procedures for automated interpolation
2013-11-24 boxplotdbl Double Box Plot for Two-Axes Correlation
2013-11-24 bpca Biplot of Multivariate Data Based on Principal Components Analysis
2013-11-23 demoKde Kernel Density Estimation for Demonstration Purposes
2013-11-23 growthmodels Nonlinear Growth Models
2013-11-22 BayesXsrc R Package Distribution of the BayesX C++ Sources
2013-11-22 BMS Bayesian Model Averaging Library
2013-11-22 DoubleCone Test against parametric regression function
2013-11-22 GMMBoost Likelihood-based Boosting for Generalized mixed models
2013-11-22 msgpackR A library to serialize or unserialize data in MessagePack format
2013-11-21 BSagri Statistical methods for safety assessment in agricultural field trials
2013-11-21 lestat A package for LEarning STATistics
2013-11-21 ncf spatial nonparametric covariance functions
2013-11-21 osmar OpenStreetMap and R
2013-11-21 PubBias Performs simulation study to look for publication bias, using a technique described by Ioannidis and Trikalinos; Clin Trials. 2007;4(3):245-53
2013-11-20 magic create and investigate magic squares
2013-11-20 PearsonDS Pearson Distribution System
2013-11-20 vegclust Fuzzy clustering of vegetation data
2013-11-20 witness This package fits eyewitness data using Clark's (2003) WITNESS model
2013-11-19 gcdnet LASSO and (adaptive) Elastic-Net penalized least squares, logistic regression, HHSVM and squared hinge loss SVM using a fast GCD algorithm
2013-11-19 mlDNA Machine Learning-based Differential Network Analysis of Transcriptome Data
2013-11-19 somebm some Brownian motions simulation functions
2013-11-19 VLF Frequency Matrix Approach for Assessing Very Low Frequency Variants in Sequence Records
2013-11-18 bigmemory Manage massive matrices with shared memory and memory-mapped files
2013-11-18 codadiags Markov chain Monte Carlo burn-in based on "bridge" statistics
2013-11-18 eqs2lavaan EQS Output Conversion to lavaan Functions
2013-11-18 MetStaT Statistical metabolomics tools
2013-11-18 rbefdata BEFdata R package
2013-11-17 glmmML Generalized linear models with clustering
2013-11-17 vscc Variable selection for clustering and classification
2013-11-16 contrast A collection of contrast methods
2013-11-16 grade Binary Grading functions for R
2013-11-16 LPCM Local principal curve methods
2013-11-15 DiceView Plot methods for computer experiments design and surrogate
2013-11-15 DiscriMiner Tools of the Trade for Discriminant Analysis
2013-11-15 PropScrRand Propensity score methods for assigning treatment in randomized trials
2013-11-15 VizOR Graphical visualization tools for complex observational data with focus on health sciences (VizOR)
2013-11-14 maxent Low-memory Multinomial Logistic Regression with Support for Text Classification
2013-11-14 tester Tests and checks characteristics of R objects
2013-11-13 diaplt Beads Summary Plot of Ranges
2013-11-13 EMMIXskew The EM Algorithm and Skew Mixture Distribution
2013-11-13 HaploSim Functions to simulate haplotypes
2013-11-13 mreg Fits regression models when the outcome is partially missing
2013-11-13 PAGWAS Pathway analysis methods for genomewide association data
2013-11-13 Rambo The Random Subgraph Model
2013-11-12 colorfulVennPlot Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data
2013-11-12 distory Distance Between Phylogenetic Histories
2013-11-12 robustfa An Object Oriented Solution for Robust Factor Analysis
2013-11-12 rtf Rich Text Format (RTF) Output
2013-11-11 clv Cluster Validation Techniques
2013-11-11 GenKern Functions for generating and manipulating binned kernel density estimates
2013-11-11 rGammaGamma Gamma convolutions for methylation array background correction
2013-11-10 FusedPCA Community Detection via Fused Principal Component Analysis
2013-11-09 aqfig Functions to help display air quality model output and monitoring data
2013-11-09 dielectric Defines some physical constants and dielectric functions commonly used in optics, plasmonics
2013-11-09 edrGraphicalTools Provides tools for dimension reduction methods
2013-11-08 brglm Bias reduction in binomial-response generalized linear models
2013-11-08 circular Circular Statistics
2013-11-08 quint Qualitative Interaction Trees
2013-11-08 stima Simultaneous Threshold Interaction Modeling Algorithm
2013-11-07 localdepth Local Depth
2013-11-07 pcse Panel-Corrected Standard Error Estimation in R
2013-11-07 SPEI Calculation of the Standardised Precipitation-Evapotranspiration Index
2013-11-06 ABCoptim Implementation of Artificial Bee Colony (ABC) Optimization
2013-11-06 CPMCGLM Correction of the pvalue after multiple coding
2013-11-06 Hotelling Hotelling's T-squared test and variants
2013-11-06 learningr Data and functions to accompany the book "Learning R"
2013-11-06 Rclusterpp Linkable C++ clustering
2013-11-06 RGenetics R packages for genetics research
2013-11-05 bigtabulate table-, tapply-, and split-like functionality for matrix and big.matrix objects
2013-11-05 comparison Multivariate likelihood ratio calculation and evaluation
2013-11-05 shinyAce Ace editor bindings for Shiny
2013-11-05 sspline Smoothing Splines on the Sphere
2013-11-04 gskat GEE_KM
2013-11-04 isva Independent Surrogate Variable Analysis
2013-11-04 ktsolve Configurable function for solving families of nonlinear equations
2013-11-04 matie Measuring Association and Testing Independence Efficiently
2013-11-04 mvShapiroTest Generalized Shapiro-Wilk test for multivariate normality
2013-11-04 smam Statistical Modeling of Animal Movements
2013-11-04 someMTP Some Multiple Testing Procedures
2013-11-04 termstrc Zero-coupon Yield Curve Estimation
2013-11-03 MonoPoly Functions to fit monotone polynomials
2013-11-03 pedigree Pedigree functions
2013-11-02 prinsimp Finding and plotting simple basis vectors for multivariate data
2013-11-02 RCPmod Regions of common profiles modelling with mixtures-of-experts
2013-11-01 ccaPP (Robust) canonical correlation analysis via projection pursuit
2013-11-01 PAGI The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways
2013-11-01 rgcvpack R Interface for GCVPACK Fortran Package
2013-10-31 ACD Categorical data analysis with complete or missing responses
2013-10-31 CIFsmry Weighted summary of cumulative incidence functions
2013-10-31 DDHFm Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
2013-10-31 gllm Generalised log-linear model
2013-10-31 lmf Functions for estimation and inference of selection in age-structured populations
2013-10-31 MRsurv A multiplicative-regression model for relative survival
2013-10-31 sExtinct Calculates the historic date of extinction given a series of sighting events
2013-10-31 SpatialNP Multivariate nonparametric methods based on spatial signs and ranks
2013-10-30 RCircos Circos 2D Track Plot
2013-10-30 SuppDists Supplementary distributions
2013-10-29 cluster.datasets Cluster Analysis Data Sets
2013-10-29 Matching Multivariate and Propensity Score Matching with Balance Optimization
2013-10-28 BayesSAE Bayesian Analysis of Small Area Estimation
2013-10-28 fingerprint Functions to operate on binary fingerprint data
2013-10-28 IPSUR Introduction to Probability and Statistics Using R
2013-10-27 mar1s Multiplicative AR(1) with Seasonal Processes
2013-10-26 clpAPI R Interface to C API of COIN-OR Clp
2013-10-25 CARrampsOcl Reparameterized and marginalized posterior sampling for conditional autoregressive models, OpenCL implementation
2013-10-25 DCL Claims Reserving under the Double Chain Ladder Model
2013-10-25 dgof Discrete Goodness-of-Fit Tests
2013-10-25 hdlm Fitting High Dimensional Linear Models
2013-10-25 kmconfband Kaplan-Meier Simultaneous Confidence Band for the Survivor Function
2013-10-25 SPARQL SPARQL client
2013-10-24 BASIX BASIX: An efficient C/C++ toolset for R
2013-10-24 fastcox Lasso and elastic-net penalized Cox's regression in high dimensions models using the cocktail algorithm
2013-10-24 mcgibbsit Warnes and Raftery's MCGibbsit MCMC diagnostic
2013-10-23 fbRanks Association Football (Soccer) Ranking via Poisson Regression
2013-10-23 globalGSA Global Gene-Set Analysis for Association Studies
2013-10-23 MFHD Multivariate Functional Halfspace Depth
2013-10-23 RForcecom RForcecom provides the connection to Force.com and Salesforce.com from R
2013-10-22 ACTCD Asymptotic Classification Theory for Cognitive Diagnosis
2013-10-22 HDtweedie The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm
2013-10-22 Rmisc Rmisc: Ryan Miscellaneous
2013-10-22 smart Sparse Multivariate Analysis via Rank Transformation
2013-10-22 snapshot Gadget N-body cosmological simulation code snapshot I/O utilities
2013-10-22 sphereplot Spherical plotting
2013-10-22 sss Tools for importing files in the triple-s .(Standard Survey Structure) format
2013-10-22 surveydata Tools to manipulate survey data
2013-10-21 evobiR evobiR: evolutionary biology in R
2013-10-21 lomb Lomb-Scargle Periodogram
2013-10-21 mQTL Metabolomic Quantitative Trait Locus Mapping
2013-10-21 wavethresh Wavelets statistics and transforms
2013-10-20 RRF Regularized Random Forest
2013-10-19 hdrcde Highest density regions and conditional density estimation
2013-10-18 datautils Support functions for packages VBmix, semisupKernelPCA, and patchPlot
2013-10-18 locits Test of stationarity and localized autocovariance
2013-10-17 knitrBootstrap Knitr Bootstrap framework
2013-10-17 OIsurv Survival analysis supplement to OpenIntro guide
2013-10-17 RTConnect Tools for analyzing sales report files of iTunes Connect
2013-10-16 DAAGxtras Data Sets and Functions, supplementary to DAAG
2013-10-16 lxb Fast LXB file reader
2013-10-16 NormalGamma Normal-gamma convolution model
2013-10-16 regpro Nonparametric Regression
2013-10-15 corrplot Visualization of a correlation matrix
2013-10-15 cvq2 Calculate the predictive squared correlation coefficient
2013-10-15 Segmentor3IsBack A Fast Segmentation Algorithm
2013-10-15 zoom A spatial data visualization tool
2013-10-14 costat Time series costationarity determination
2013-10-14 EMMAgeo End-member modelling algorithm and supporting functions for grain-size analysis
2013-10-13 Correlplot A collection of functions for graphing correlation matrices
2013-10-13 shinyRGL Shiny Wrappers for RGL
2013-10-12 cpa Confirmatory Path Analysis through the d-sep tests
2013-10-12 FITSio FITS (Flexible Image Transport System) utilities
2013-10-12 mcGlobaloptim Global optimization using Monte Carlo and Quasi Monte Carlo simulation
2013-10-12 rdd Regression Discontinuity Estimation
2013-10-12 rsig Robust Signature Selection for Survival Outcomes
2013-10-11 GlobalDeviance Global Deviance Permutation Tests
2013-10-11 ICS Tools for Exploring Multivariate Data via ICS/ICA
2013-10-11 LOST Missing morphometric data simulation and estimation
2013-10-11 MRwarping Multiresolution time warping for functional data
2013-10-11 OptHedging Estimation of value and hedging strategy of call and put options
2013-10-11 orsk Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information
2013-10-10 MCPAN Multiple comparisons using normal approximation
2013-10-10 TestSurvRec Statistical tests to compare two survival curves with recurrent events
2013-10-09 binMto Asymptotic simultaneous confidence intervals for many-to-one comparisons of proportions
2013-10-09 ScrabbleScore Calculates Scrabble score for strings
2013-10-08 bmem Mediation analysis with missing data using bootstrap
2013-10-08 caroline A Collection of Database, Data Structure, Visualization, and Utility Functions for R
2013-10-07 censNID censored NID samples
2013-10-07 migration.indices Migration indices
2013-10-05 DAAGbio Data Sets and Functions, for demonstrations with expression arrays and gene sequences
2013-10-05 fdrci Permutation-based FDR Point and Confidence Interval Estimation
2013-10-04 kitagawa Spectral response of water wells to harmonic strain and pressure
2013-10-04 TDD Time-Domain Deconvolution of Seismometer Response
2013-10-03 HEAT Health Effects of Air Pollution and Temperature (HEAT)
2013-10-03 powerAnalysis Power analysis in experimental design
2013-10-03 proftools Profile Output Processing Tools for R
2013-10-03 riv Robust instrumental variables estimator
2013-10-02 SpeciesMix Fit Mixtures of Archetype species
2013-10-01 dcmle Hierarchical Models Made Easy with Data Cloning
2013-10-01 IsotopeR Stable isotope analysis
2013-10-01 kulife Datasets and functions from the (now non-existing) Faculty of Life Sciences, University of Copenhagen
2013-10-01 PsumtSim Simulations of grouped responses relative to baseline
2013-09-30 AUC Threshold independent performance measures for probabilistic classifiers
2013-09-30 dclone Data Cloning and MCMC Tools for Maximum Likelihood Methods
2013-09-30 LCA Localised Co-Dependency Analysis
2013-09-30 ParentOffspring Conduct the Parent-Offspring Test Using Monomorphic SNP Markers
2013-09-30 plan Tools for project planning
2013-09-30 topsis TOPSIS method for multiple-criteria decision making (MCDM)
2013-09-29 coloc Colocalisation tests of two genetic traits
2013-09-29 elliplot Ellipse Summary Plot of Quantiles
2013-09-27 BAYSTAR On Bayesian analysis of Threshold autoregressive model (BAYSTAR)
2013-09-27 FitARMA FitARMA: Fit ARMA or ARIMA using fast MLE algorithm
2013-09-27 MRMR Multivariate Regression Models for Reserving
2013-09-27 rDNA R Bindings for the Discourse Network Analyzer
2013-09-27 snow Simple Network of Workstations
2013-09-26 ssvd Sparse SVD
2013-09-25 sos Search contributed R packages, sort by package
2013-09-25 SubCultCon Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures
2013-09-25 wgsea Wilcoxon based gene set enrichment analysis
2013-09-24 Map2NCBI Mapping Markers to the Nearest Genomic Feature
2013-09-24 NPHMC Sample Size Calculation for the Proportional Hazards Mixture Cure Model
2013-09-23 animalTrack Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data
2013-09-23 EffectsRelBaseline Test changes of a grouped response relative to baseline
2013-09-23 GUIDE GUI for DErivatives in R
2013-09-23 hzar Hybrid Zone Analysis using R
2013-09-23 LSMonteCarlo American options pricing with Least Squares Monte Carlo method
2013-09-23 SAMURAI Sensitivity Analysis of a Meta-analysis with Unpublished but Registered Analytical Investigations
2013-09-23 ZeligChoice Zelig Choice Models
2013-09-23 ZeligGAM General Additive Models for Zelig
2013-09-23 ZeligMultilevel Multilevel Regressions for Zelig
2013-09-22 AtelieR A GTK GUI for teaching basic concepts in statistical inference, and doing elementary bayesian tests
2013-09-22 lazy Lazy Learning for Local Regression
2013-09-21 boss Boosted One-Step Statistics: Fast and accurate approximations for GLM, GEE and Mixed models for use in GWAS
2013-09-21 cocron Statistical comparisons of two or more alpha coefficients
2013-09-21 CrypticIBDcheck Identifying cryptic relatedness in genetic association studies
2013-09-21 dataQualityR Performs variable level data quality checks and generates summary statistics
2013-09-21 LDheatmap Graphical display of pairwise linkage disequilibria between SNPs
2013-09-21 phmm Proportional Hazards Mixed-effects Model (PHMM)
2013-09-21 Zelig Everyone's Statistical Software
2013-09-20 svapls Surrogate variable analysis using partial least squares in a gene expression study
2013-09-19 Biograph Explore life histories
2013-09-19 fail File Abstraction Interface Layer (FAIL) mimicking a key-value store
2013-09-19 prLogistic Estimation of Prevalence Ratios using Logistic Models
2013-09-19 qtlhot Inference for QTL Hotspots
2013-09-19 zyp Zhang + Yue-Pilon trends package
2013-09-18 Dodge Functions for Acceptance Sampling Ideas originated by H.F. Dodge
2013-09-18 dynaTree Dynamic trees for learning and design
2013-09-17 GABi Framework for Generalized Subspace Pattern Mining
2013-09-16 akima Interpolation of irregularly spaced data
2013-09-16 HMPTrees Statistical Object Oriented Data Analysis of RDP-based Taxonomic trees from Human Microbiome Data: Modeling, Visualization, and Two-Group Comparison
2013-09-16 R4dfp 4dfp MRI Image Read and Write Routines
2013-09-16 SMCRM Data Sets for Statistical Methods in Customer Relationship Management by Kumar and Petersen (2012)
2013-09-16 speccalt Alternative spectral clustering, with automatic estimation of k
2013-09-16 tripack Triangulation of irregularly spaced data
2013-09-16 yhat Interpreting Regression Effects
2013-09-15 forensim Statistical tools for the interpretation of forensic DNA mixtures
2013-09-15 GPCSIV GPCSIV, Generalized Principal Component of Symbolic Interval variables
2013-09-14 EILA Efficient Inference of Local Ancestry
2013-09-14 RcmdrPlugin.qual Rcmdr plugin for quality control course
2013-09-14 RobRex Optimally robust influence curves for regression and scale
2013-09-14 ROptRegTS Optimally robust estimation for regression-type models
2013-09-13 Daim Diagnostic accuracy of classification models
2013-09-13 distrEllipse S4 classes for elliptically contoured distributions
2013-09-13 distrEx Extensions of package distr
2013-09-13 distrRmetrics Package distr classes for distributions from Rmetrics
2013-09-13 distrTeach Extensions of package distr for teaching Stochastics/Statistics in secondary school
2013-09-13 distrTEst Estimation and Testing classes based on package distr
2013-09-13 EcoTroph EcoTroph R package
2013-09-13 ez Easy analysis and visualization of factorial experiments
2013-09-13 RobAStBase Robust Asymptotic Statistics
2013-09-13 RobLox Optimally robust influence curves and estimators for location and scale
2013-09-13 RobLoxBioC Infinitesimally robust estimators for preprocessing omics data
2013-09-13 ROptEst Optimally robust estimation
2013-09-13 ROptEstOld Optimally robust estimation - old version
2013-09-13 startupmsg Utilities for start-up messages
2013-09-12 distrSim Simulation classes based on package distr
2013-09-12 logcondens.mode Compute MLE of Log-Concave Density on R with Fixed Mode, and Perform Inference for the Mode
2013-09-12 MLRMPA A package for Multilinear Regression Model Population Analysis
2013-09-12 optpart Optimal partitioning of similarity relations
2013-09-12 phalen Phalen Algorithms and Functions
2013-09-11 pastis Phylogenetic Assembly with Soft Taxonomic Inferences
2013-09-11 RandVar Implementation of random variables
2013-09-11 relaimpo Relative importance of regressors in linear models
2013-09-10 calibrate Calibration of Scatterplot and Biplot Axes
2013-09-10 FREQ FREQ: Estimate population size from capture frequencies
2013-09-10 PSM Non-Linear Mixed-Effects modelling using Stochastic Differential Equations
2013-09-10 smdata Data to accompany Smithson & Merkle, 2013
2013-09-10 splusTimeSeries Time Series from S-PLUS
2013-09-09 camel Calibrated Machine Learning
2013-09-09 DendSer Dendrogram seriation: ordering for visualisation
2013-09-09 onemap Software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
2013-09-08 RMongo MongoDB Client for R
2013-09-08 ttwa Travel To Work Area
2013-09-07 ALSCPC Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form
2013-09-05 CommonTrend Extract and plot common trends from a cointegration system. Calculate P-value for Johansen Statistics
2013-09-05 G1DBN A package performing Dynamic Bayesian Network inference
2013-09-05 survPresmooth Presmoothed Estimation in Survival Analysis
2013-09-04 kelvin Calculate solutions to the Kelvin differential equation using Bessel functions
2013-09-04 laser Likelihood Analysis of Speciation/Extinction Rates from Phylogenies
2013-09-04 PF Prevented fraction
2013-09-04 tiff Read and write TIFF images
2013-09-03 expoTree Calculate density dependent likelihood of a phylogenetic tree
2013-09-03 genetics Population Genetics
2013-09-03 inlinedocs Convert inline comments to documentation
2013-09-03 RFGLS Rapid Feasible Generalized Least Squares
2013-09-03 sparc Semiparametric Generalized Linear Models
2013-09-02 ibr Iterative Bias Reduction
2013-09-02 modeltools Tools and Classes for Statistical Models
2013-09-02 scrime Analysis of High-Dimensional Categorical Data such as SNP Data
2013-09-02 tabplotd3 Tabplotd3, interactive inspection of large data
2013-08-31 hisemi Hierarchical Semiparametric Regression of Test Statistics
2013-08-31 lrmest Different types of estimators to deal with multicollinearity
2013-08-31 minpack.lm R interface to the Levenberg-Marquardt nonlinear least-squares algorithm found in MINPACK, plus support for bounds
2013-08-30 fExpressCertificates fExpressCertificates - Structured Products Valuation for ExpressCertificates/Autocallables
2013-08-30 genMOSSplus Application of MOSS algorithm to genome-wide association study (GWAS)
2013-08-30 getopt C-like getopt behavior
2013-08-29 automap Automatic interpolation package
2013-08-28 mmap Map Pages of Memory
2013-08-28 RStorm Simulate and Develop Streaming Processing in [R]
2013-08-27 EMVC Entropy Minimization over Variable Clusters (EMVC)
2013-08-27 VaRES Computes value at risk and expected shortfall for over 100 parametric distributions
2013-08-26 dbEmpLikeGOF Goodness-of-fit and two sample comparison tests using sample entropy
2013-08-26 epoc EPoC (Endogenous Perturbation analysis of Cancer)
2013-08-26 SML Statistical Machine Learning
2013-08-24 soilprofile A package to consistently represent soil properties along a soil profile
2013-08-23 corTools Tools for processing data after a Genome Wide Association Study
2013-08-23 RcmdrPlugin.sampling Tools for sampling in Official Statistical Surveys
2013-08-23 rtematres The rtematres API package
2013-08-23 spaa SPecies Association Analysis
2013-08-23 tlemix Trimmed Maximum Likelihood Estimation
2013-08-22 fds Functional data sets
2013-08-22 GeoXp Interactive exploratory spatial data analysis
2013-08-22 Rjpstatdb R interface of the Gateway to Advanced and User-friendly Statistics Service
2013-08-22 smss Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences"
2013-08-22 ssfit Fitting of parametric models using summary statistics
2013-08-21 intamapInteractive procedures for automated interpolation - methods only to be used interactively, not included in intamap package
2013-08-21 kmlcov Clustering longitudinal data using the likelihood as a metric of distance
2013-08-21 RepeatedHighDim Global tests for expression data of high-dimensional sets of molecular features
2013-08-21 Rserve Binary R server
2013-08-21 SOLOMON Parentage analysis
2013-08-21 specificity Specificity of personality trait-outcome (or trait-trait) associations
2013-08-21 spls Sparse Partial Least Squares (SPLS) Regression and Classification
2013-08-20 CellularAutomaton One-Dimensional Cellular Automata
2013-08-20 censReg Censored Regression (Tobit) Models
2013-08-20 frontier Stochastic Frontier Analysis
2013-08-20 phenmod Auxiliary functions for phenological data processing, modelling and result handling
2013-08-20 SEchart SEchart
2013-08-20 WDI World Development Indicators (World Bank)
2013-08-19 protiq Protein (identification and) quantification based on peptide evidence
2013-08-19 SynchWave Synchrosqueezed Wavelet Transform
2013-08-19 vwr Useful functions for visual word recognition research
2013-08-17 bitops Bitwise Operations
2013-08-17 condGEE Parameter estimation in conditional GEE for recurrent event gap times
2013-08-17 mixsmsn Fitting finite mixture of scale mixture of skew-normal distributions
2013-08-17 profileModel Tools for profiling inference functions for various model classes
2013-08-16 blm Binomial linear and linear-expit regression
2013-08-16 CNVassocData Example data sets for association analysis of CNV data
2013-08-16 JOP Joint Optimization Plot
2013-08-16 PCS Calculate the probability of correct selection (PCS)
2013-08-16 relaxnet Relaxation of glmnet models (as in relaxed lasso, Meinshausen 2007)
2013-08-16 SEMID Identifiability of linear structural equation models
2013-08-15 bvpSolve Solvers for boundary value problems of ordinary differential equations
2013-08-15 conjoint Conjoint analysis package
2013-08-15 latticeExtra Extra Graphical Utilities Based on Lattice
2013-08-14 covTest Computes covariance test for adaptive linear modelling
2013-08-14 IntLik Numerical Integration for Integrated Likelihood
2013-08-13 EasyHTMLReport EasyHTMLReport
2013-08-13 ES Edge Selection
2013-08-13 PAS Polygenic Analysis System (PAS)
2013-08-13 RFinanceYJ RFinanceYJ
2013-08-12 rLindo R Interface to LINDO API
2013-08-12 SpatioTemporal Spatio-Temporal Model Estimation
2013-08-10 bmp Read Windows Bitmap (BMP) images
2013-08-10 PK Basic Non-Compartmental Pharmacokinetics
2013-08-09 mallet A wrapper around the Java machine learning tool MALLET
2013-08-08 DMwR Functions and data for "Data Mining with R"
2013-08-08 gb Generalize Lambda Distribution and Generalized Bootstrapping
2013-08-08 gRim Graphical Interaction Models
2013-08-08 miRada MicroRNA Microarray Data Analysis
2013-08-08 spt Sierpinski Pedal Triangle
2013-08-07 IASD Model selection for index of asymmetry distribution
2013-08-05 coarseDataTools A collection of functions to help with analysis of coarsely observed data
2013-08-04 CompLognormal Functions for actuarial scientists
2013-08-04 lmeSplines Add smoothing spline modelling capability to nlme
2013-08-04 nlmeU Datasets and utility functions enhancing functionality of nlme package
2013-08-03 tipom Automated measure-based classification for flint tools
2013-08-03 visualize Graph Probability Distributions with User Supplied Parameters and Stats
2013-08-02 AMGET Post-processing tool for ADAPT 5
2013-08-02 dfcrm Dose-finding by the continual reassessment method
2013-08-02 ltsbase Ridge and Liu Estimates based on LTS (Least Trimmed Squares) Method
2013-08-02 sme Smoothing-splines Mixed-effects Models
2013-08-02 timesboot Bootstrap computations for time series objects
2013-08-01 compactr Creates empty plots with compact axis notation
2013-08-01 rbmn Handling Linear Gaussian Bayesian Networks
2013-07-31 acopula Modelling dependence with multivariate Archimax (or any user-defined continuous) copulas
2013-07-31 FNN Fast Nearest Neighbor Search Algorithms and Applications
2013-07-31 gPCA Batch Effect Detection via Guided Principal Components Analysis
2013-07-31 needy needy
2013-07-31 SparseGrid Sparse grid integration in R
2013-07-30 COBRA Nonlinear Aggregation of Predictors
2013-07-30 epr Easy polynomial regression
2013-07-30 Lambda4 Collection of Internal Consistency Reliability Coefficients
2013-07-29 pathdiagram Basic functions for drawing path diagrams
2013-07-29 robeth R functions for robust statistics
2013-07-29 SimultAnR Correspondence and Simultaneous Analysis
2013-07-29 widenet Penalized Regression with Polynomial Basis Expansions
2013-07-28 MPINet The package can implement the network-based metabolite pathway identification of pathways
2013-07-28 pwt Penn World Table (Versions 5.6, 6.x, 7.x)
2013-07-28 Rz GUI Tool for Data Management like SPSS or Stata
2013-07-27 eigenprcomp Computes confidence intervals for principal components
2013-07-26 ebdbNet Empirical Bayes Estimation of Dynamic Bayesian Networks
2013-07-26 Myrrixjars External jars required for package Myrrix
2013-07-25 AnDE An extended Bayesian Learning Technique developed by Dr. Geoff Webb
2013-07-25 gains Gains Table Package
2013-07-24 hint Tools for hypothesis testing based on Hypergeometric Intersection distributions
2013-07-24 RGCCA RGCCA and Sparse GCCA for multi-block data analysis
2013-07-24 RxCEcolInf R x C Ecological Inference With Optional Incorporation of Survey Information
2013-07-24 tgram Functions to compute and plot tracheidograms
2013-07-23 directlabels Direct labels for multicolor plots in lattice or ggplot2
2013-07-23 neuroblastoma Neuroblastoma copy number profiles
2013-07-23 PatternClass Class-focused pattern metric comparisons using simulation
2013-07-22 anametrix Bidirectional connector to Anametrix API
2013-07-22 somplot Visualisation of hexagonal Kohonen maps
2013-07-22 vars VAR Modelling
2013-07-22 wordmatch Matches words in one file with words in another file
2013-07-21 mondate Keep track of dates in terms of months
2013-07-21 suRtex LaTeX descriptive statistic reporting for survey data
2013-07-19 BsMD Bayes Screening and Model Discrimination
2013-07-18 bride Brier score decomposition of probabilistic forecasts for binary events
2013-07-18 Causata Analysis utilities for binary classification and Causata users
2013-07-18 DescribeDisplay R interface to DescribeDisplay (GGobi plugin)
2013-07-17 maRketSim Market simulator for R
2013-07-16 LogrankA Logrank Test for Aggregated Survival Data
2013-07-16 QSARdata Quantitative Structure Activity Relationship (QSAR) Data Sets
2013-07-15 rexpokit R wrappers for EXPOKIT; other matrix functions
2013-07-15 straweib Stratified Weibull Regression Model
2013-07-14 gpk 100 Data Sets for Statistics Education
2013-07-14 oblique.tree Oblique Trees for Classification Data
2013-07-13 kza Kolmogorov-Zurbenko Adaptive Filters
2013-07-13 phyloclim Integrating Phylogenetics and Climatic Niche Modeling
2013-07-12 desire Desirability functions in R
2013-07-12 icaOcularCorrection Independent Components Analysis (ICA) based artifact correction
2013-07-12 LS2W Locally stationary two-dimensional wavelet process estimation scheme
2013-07-12 PROFANCY The package can prioritize candidate disease metabolites based on global functional relationships between metabolites in the context of metabolic pathways
2013-07-11 DistatisR DiSTATIS Three Way Metric Multidimensional Scaling
2013-07-11 munsell Munsell colour system
2013-07-11 optBiomarker Estimation of optimal number of biomarkers for two-group microarray based classifications at a given error tolerance level for various classification rules
2013-07-11 splus2R Supplemental S-PLUS functionality in R
2013-07-11 switchnpreg Switching nonparametric regression models for a single curve and functional data
2013-07-10 MDM Multinomial Diversity Model
2013-07-09 backtest Exploring portfolio-based conjectures about financial instruments
2013-07-09 EnvNicheR Environmental niche
2013-07-09 ipfp Fast implementation of the iterative proportional fitting procedure in C
2013-07-09 portfolioSim Framework for simulating equity portfolio strategies
2013-07-09 VDA VDA
2013-07-06 sGPCA Sparse Generalized Principal Component Analysis
2013-07-06 smoothie Two-dimensional Field Smoothing
2013-07-05 EDR Estimation of the effective dimension reduction (EDR) space
2013-07-04 ExactCIdiff Inductive Confidence Intervals for the difference between two proportions
2013-07-04 LDcorSV Linkage disequilibrium corrected by the structure and the relatedness
2013-07-03 abundant Abundant regression and high-dimensional principal fitted components
2013-07-03 QZ Generalized Eigenvalues and QZ Decomposition
2013-07-03 SNPtools Accessing, subsetting and plotting mouse SNPs
2013-07-02 clusterGenomics Identifying clusters in genomics data by recursive partitioning
2013-07-02 flexclust Flexible Cluster Algorithms
2013-07-02 retimes Reaction Time Analysis
2013-07-01 DTK Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes
2013-07-01 pathClass Classification using biological pathways as prior knowledge
2013-06-30 AlleleRetain Allele Retention, Inbreeding, and Demography
2013-06-29 sjdbc JDBC Driver Interface
2013-06-29 tibbrConnector R interface to tibbr
2013-06-28 FField Force field simulation for a set of points
2013-06-28 FisherEM The Fisher-EM algorithm
2013-06-28 loglognorm Double log normal distribution functions
2013-06-28 MatchIt MatchIt: Nonparametric Preprocessing for Parametric Casual Inference
2013-06-28 r2dRue 2d Rain Use Efficience model
2013-06-27 b6e6rl Adaptive differential evolution, b6e6rl variant
2013-06-27 itree Tools for classification and regression trees, with an emphasis on interpretability
2013-06-27 MAMSE Calculation of Minimum Averaged Mean Squared Error (MAMSE) weights
2013-06-27 PCICt Implementation of POSIXct work-alike for 365 and 360 day calendars
2013-06-26 logistf Firth's bias reduced logistic regression
2013-06-26 rv Simulation-based random variable objects
2013-06-25 LICurvature Sensitivity Analysis for Case Weight in Normal Linear Regression
2013-06-24 fArma ARMA Time Series Modelling
2013-06-24 fAsianOptions EBM and Asian Option Valuation
2013-06-24 fNonlinear Nonlinear and Chaotic Time Series Modelling
2013-06-24 fOptions Basics of Option Valuation
2013-06-24 fUnitRoots Trends and Unit Roots
2013-06-24 tsModel Time Series Modeling for Air Pollution and Health
2013-06-23 crrSC Competing risks regression for Stratified and Clustered data
2013-06-21 ArrayBin Binarization of numeric data arrays
2013-06-21 cfa Analysis of configuration frequencies (CFA)
2013-06-19 FRAPO Financial Risk Modelling and Portfolio Optimisation with R
2013-06-19 gwrr Fits geographically weighted regression models with diagnostic tools
2013-06-19 Mcomp Data from the M-competitions
2013-06-19 MConjoint Conjoint Analysis through Averaging of Multiple Analyses
2013-06-19 RSiena Siena - Simulation Investigation for Empirical Network Analysis
2013-06-19 SmithWilsonYieldCurve Smith-Wilson Yield Curve Construction
2013-06-18 aods3 Analysis of Overdispersed Data using S3 methods
2013-06-18 glmlep Fit GLM with LEP-based penalized maximum likelihood
2013-06-18 rsgcc Gini methodology-based correlation and clustering analysis of microarray and RNA-Seq gene expression data
2013-06-18 ZeBook ZeBook Working with dynamic models for agriculture and environment
2013-06-17 Bolstad Bolstad functions
2013-06-17 Bolstad2 Bolstad functions
2013-06-17 MCPerm A Monte Carlo permutation method for multiple test correlation
2013-06-17 twiddler Interactive manipulation of R expressions
2013-06-16 CompQuadForm Distribution function of quadratic forms in normal variables
2013-06-16 JointRegBC Joint Modelling of Mixed Correlated Binary and Continuous Responses : A Latent Variable Approach
2013-06-16 nsga2R Elitist Non-dominated Sorting Genetic Algorithm based on R
2013-06-15 MExPosition Multi-table ExPosition
2013-06-14 miscF Miscellaneous Functions
2013-06-13 depthTools Depth Tools Package
2013-06-13 govStatJPN functions to get public survey data in Japan
2013-06-13 PDSCE Positive definite sparse covariance estimators
2013-06-13 RcmdrPlugin.depthTools R commander Depth Tools Plug-In
2013-06-12 SoDA Functions and Examples for "Software for Data Analysis"
2013-06-11 ISLR Data for An Introduction to Statistical Learning with Applications in R
2013-06-11 MRCE Multivariate regression with covariance estimation
2013-06-11 tbdiag Functions for tuberculosis diagnostics research
2013-06-10 cabootcrs Bootstrap Confidence Regions for Correspondence Analysis
2013-06-10 covLCA Latent Class Models with Covariate Effects on Underlying and Measured Variables
2013-06-10 sparktex Generate LaTeX sparklines in R
2013-06-09 MNP R Package for Fitting the Multinomial Probit Model
2013-06-08 lshorth The Length of the Shorth
2013-06-08 pbs Periodic B Splines
2013-06-06 IUPS Incorporating Uncertainties in Propensity Scores
2013-06-06 LVMMCOR A Latent Variable Model for Mixed Continuous and Ordinal Responses
2013-06-06 urca Unit root and cointegration tests for time series data
2013-06-05 batch Batching Routines in Parallel and Passing Command-Line Arguments to R
2013-06-04 FGalgorithm Flury and Gautschi algorithms
2013-06-04 mopsocd MOPSOCD: Multi-objective Particle Swarm Optimization with Crowding Distance
2013-06-04 NPMVCP Nonparametric Multivariate Change Point Model
2013-06-04 RSADBE Data related to the book "R Statistical Application Development by Example"
2013-06-04 skatMeta Efficient meta analysis for the SKAT test
2013-06-03 ahaz Regularization for semiparametric additive hazards regression
2013-06-03 l2boost l2boost - Friedman's boosting algorithm for regularized linear regression
2013-06-03 nlts (non)linear time series analysis
2013-06-03 RobustRankAggreg Methods for robust rank aggregation
2013-06-03 TrialSize R functions in Chapter 3,4,6,7,9,10,11,12,14,15
2013-05-31 KoNLP Korean NLP Package
2013-05-31 protoclass Interpretable classification with prototypes
2013-05-30 metamisc Diagnostic and prognostic meta analysis (metamisc)
2013-05-29 OneTwoSamples Deal with one and two (normal) samples
2013-05-28 CoinMinD Simultaneous Confidence Interval for Multinomial Proportion
2013-05-28 DTMCPack Suite of functions related to discrete-time discrete-state Markov Chains
2013-05-28 fitTetra fitTetra is an R package for assigning tetraploid genotype scores
2013-05-28 RVtests Rare Variant Tests
2013-05-27 compareODM comparison of medical forms in CDISC ODM format
2013-05-27 eba Elimination-by-Aspects (EBA) Models
2013-05-26 ggROC package for roc curve plot with ggplot2
2013-05-26 McSpatial Nonparametric spatial data analysis
2013-05-25 profdpm Profile Dirichlet Process Mixtures
2013-05-25 SphericalCubature Numerical integration over spheres and balls in n-dimensions; multivariate polar coordinates
2013-05-24 BSquare Bayesian Simultaneous Quantile Regression
2013-05-24 lbiassurv Length-biased correction to survival curve estimation
2013-05-24 tlnise Two-level normal independent sampling estimation
2013-05-23 InferenceSMR Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival
2013-05-23 SODC Optimal Discriminant Clustering(ODC) and Sparse Optimal Discriminant Clustering(SODC)
2013-05-22 cyphid Cycle and Phase Identification for mastication data
2013-05-22 parallelize.dynamic Automate parallelization of function calls by means of dynamic code analysis
2013-05-22 trueskill Implementation the TrueSkill algorithm in R
2013-05-21 fastICA FastICA Algorithms to perform ICA and Projection Pursuit
2013-05-21 rPlant R interface to the iPlant Discovery Environment
2013-05-21 SetMethods SetMethods: A Package Companion to "Set-Theoretic Methods for the Social Sciences"
2013-05-20 pom POM - Patch Occupancy Models
2013-05-19 pnmtrem Probit-Normal Marginalized Transition Random Effects Models
2013-05-19 probsvm probsvm: Class probability estimation for Support Vector Machines
2013-05-18 CfEstimateQuantiles Estimate quantiles using any order Cornish-Fisher expansion
2013-05-18 SMFI5 R functions and data from Chapter 5 of 'Statistical Methods for Financial Engineering'
2013-05-17 CDLasso Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression
2013-05-16 biglm bounded memory linear and generalized linear models
2013-05-16 grnn General regression neural network
2013-05-16 PurBayes Bayesian Estimation of Tumor Purity and Clonality
2013-05-15 Nozzle.R1 Nozzle Reports
2013-05-15 RDSTK An R wrapper for the Data Science Toolkit API
2013-05-14 sos4R An R client for the OGC Sensor Observation Service
2013-05-13 csSAM csSAM - cell-specific Significance Analysis of Microarrays
2013-05-13 hgam High-dimensional Additive Modelling
2013-05-13 OpenMPController Control number of OpenMP threads dynamically
2013-05-12 coefplot Plots Coefficients from Fitted Models
2013-05-11 ergmharris Local Health Department network data set
2013-05-10 ArDec Time series autoregressive-based decomposition
2013-05-10 covRobust Robust Covariance Estimation via Nearest Neighbor Cleaning
2013-05-10 CoxBoost Cox models by likelihood based boosting for a single survival endpoint or competing risks
2013-05-10 GAMBoost Generalized linear and additive models by likelihood based boosting
2013-05-09 gputools A few GPU enabled functions
2013-05-09 HMP Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
2013-05-09 NHEMOtree Non-hierarchical evolutionary multi-objective tree learner to perform cost-sensitive classification
2013-05-09 timeline Timelines for a Grammar of Graphics
2013-05-09 wpp2010 World Population Prospects 2010
2013-05-08 eventstudies Event study and extreme event analysis
2013-05-08 lisrelToR Import output from LISREL into R
2013-05-08 rapport A report templating system
2013-05-07 CircNNTSR CircNNTSR: An R package for the statistical analysis of circular data using nonnegative trigonometric sums (NNTS) models
2013-05-07 corrsieve CorrSieve
2013-05-07 cshapes CShapes Dataset and Utilities
2013-05-07 ExpDes Experimental Designs package
2013-05-07 ExpDes.pt Pacote Experimental Designs (Portuguese)
2013-05-07 InteractiveIGraph interactive network analysis and visualization
2013-05-07 pnn Probabilistic neural networks
2013-05-06 GibbsACOV Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models
2013-05-06 simex SIMEX- and MCSIMEX-Algorithm for measurement error models
2013-05-04 HydroMe R codes for estimating water retention and infiltration model parameters using experimental data
2013-05-03 bnpmr Bayesian monotonic nonparametric regression
2013-05-03 diffdepprop Calculates Confidence Intervals for two Dependent Proportions
2013-05-03 iteRates Parametric rate comparison
2013-05-03 mixsep Forensic Genetics DNA Mixture Separation
2013-05-02 RAP Reversal Association Pattern
2013-05-02 spcosa Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata
2013-05-01 fGarch Rmetrics - Autoregressive Conditional Heteroskedastic Modelling
2013-05-01 MCMCpack Markov chain Monte Carlo (MCMC) Package
2013-05-01 RnavGraphImageData Some image data used in the RnavGraph package demos
2013-04-30 MAMA Meta-Analysis of MicroArray
2013-04-30 PhViD PhViD: an R package for PharmacoVigilance signal Detection
2013-04-29 tseriesChaos Analysis of nonlinear time series
2013-04-28 whisker {{mustache}} for R, logicless templating
2013-04-27 MicroStrategyR MicroStrategyR Package
2013-04-26 FuzzyToolkitUoN Type 1 Fuzzy Logic Toolkit
2013-04-25 dbEmpLikeNorm Test for joint assessment of normality
2013-04-25 hsmm Hidden Semi Markov Models
2013-04-25 princurve Fits a Principal Curve in Arbitrary Dimension
2013-04-25 sendplot Tool for sending interactive plots with tool-tip content
2013-04-25 SpherWave Spherical Wavelets and SW-based Spatially Adaptive Methods
2013-04-24 DetSel A computer program to detect markers responding to selection
2013-04-24 dirmult Estimation in Dirichlet-Multinomial distribution
2013-04-24 lars Least Angle Regression, Lasso and Forward Stagewise
2013-04-23 GENEAread Package For Reading Binary files
2013-04-23 R2G2 Converting R CRAN outputs into Google Earth
2013-04-23 siar Stable Isotope Analysis in R
2013-04-21 mgraph Graphing map attributes and non-map variables in R
2013-04-20 cdb Reading and Writing Constant DataBases
2013-04-20 ibdreg Regression Methods for IBD Linkage With Covariates
2013-04-20 locfit Local Regression, Likelihood and Density Estimation
2013-04-19 boussinesq Analytic Solutions for (ground-water) Boussinesq Equation
2013-04-19 FrF2.catlg128 Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words
2013-04-19 PairedData Paired Data Analysis
2013-04-19 repolr Repeated measures proportional odds logistic regression
2013-04-18 glmdm R Code for Simulation of GLMDM
2013-04-18 madsim A Flexible Microarray Data Simulation Model
2013-04-18 spikeslab Prediction and variable selection using spike and slab regression
2013-04-17 catspec Special models for categorical variables
2013-04-17 CheckDigit Calculate and verify check digits
2013-04-17 decon Deconvolution Estimation in Measurement Error Models
2013-04-17 GAIPE Graphical Extension with Accuracy in Parameter Estimation (GAIPE)
2013-04-17 lpridge Local Polynomial (Ridge) Regression
2013-04-17 mvbutils Workspace organization, code and documentation editing, package prep and editing, etc
2013-04-17 quadprog Functions to solve Quadratic Programming Problems
2013-04-17 rmp Rounded Mixture Package. Performs probability mass function estimation with Dirichlet process mixtures of rounded kernels
2013-04-16 appell Compute Appell's F1 hypergeometric function
2013-04-16 FRB Fast and Robust Bootstrap
2013-04-16 JGL Performs the Joint Graphical Lasso for sparse inverse covariance estimation on multiple classes
2013-04-16 spacejam Sparse conditional graph estimation with joint additive models
2013-04-15 peplib Peptide Library Analysis Methods
2013-04-15 R2Cuba Multidimensional Numerical Integration
2013-04-13 DeducerSpatial Deducer for spatial data analysis
2013-04-13 ellipse Functions for drawing ellipses and ellipse-like confidence regions
2013-04-13 FBFsearch Algorithm for searching the space of Gaussian directed acyclic graphical models through moment fractional Bayes factors
2013-04-13 OpenStreetMap Access to open street map raster images
2013-04-12 glmulti Model selection and multimodel inference made easy
2013-04-12 logging R logging package
2013-04-12 orderbook Orderbook visualization/Charting software
2013-04-12 sideChannelAttack Side Channel Attack
2013-04-10 clinUtiDNA Clinical Utility of DNA Testing
2013-04-10 deseasonalize Optimal deseasonalization for geophysical time series using AR fitting
2013-04-10 multilevel Multilevel Functions
2013-04-09 phcfM Modelling anthropogenic deforestation
2013-04-09 rbugs Fusing R and OpenBugs and Beyond
2013-04-08 df2json Convert a dataframe to JSON
2013-04-08 peperr Parallelised Estimation of Prediction Error
2013-04-08 survIDINRI IDI and NRI for comparing competing risk prediction models with censored survival data
2013-04-07 bc3net BC3NET
2013-04-07 popgen Statistical and Population Genetics
2013-04-07 SportsAnalytics Infrastructure for Sports Analytics
2013-04-05 concreg Concordance regression
2013-04-05 persiandictionary English to Persian dictionary
2013-04-05 PlotRegionHighlighter Creates an envelope that surrounds a set of points plotted in a two dimensional space
2013-04-04 BaySIC Bayesian Analysis of Significantly Mutated Genes in Cancer
2013-04-04 GeoLight Analysis of light based geolocator data
2013-04-04 inflection Finds the inflection point of a curve
2013-04-03 lint Tools to check R code style
2013-04-03 ncbit retrieve and build NBCI taxonomic data
2013-04-03 noweb Noweb system for R
2013-04-03 trioGxE A data smoothing approach to explore and test gene-environment interaction in case-parent trio data
2013-04-02 ConvCalendar Converts dates between calendars
2013-04-02 ENmisc Neuwirth miscellaneous
2013-04-02 infutil Information Utility
2013-04-02 MLEcens Computation of the MLE for bivariate (interval) censored data
2013-04-02 SGL Fit a GLM (or cox model) with a combination of lasso and group lasso regularization
2013-04-02 SPIn Simulation-efficient Shortest Probability Intervals
2013-04-01 biganalytics A library of utilities for big.matrix objects of package bigmemory
2013-04-01 gpclib General Polygon Clipping Library for R
2013-04-01 optAUC Optimal Combinations of Diagnostic Tests Based on AUC
2013-03-31 nice Get or Set UNIX Niceness
2013-03-30 pbatR P2BAT
2013-03-30 thgenetics Genetic Rare Variants Tests
2013-03-30 TSHRC Two Stage Hazard Rate Comparison
2013-03-29 experiment experiment: R package for designing and analyzing randomized experiments
2013-03-29 Ritc Isothermal Titration Calorimetry (ITC) Data Analysis
2013-03-28 ICE Iterated Conditional Expectation
2013-03-28 robustX eXperimental Functionality for Robust Statistics
2013-03-28 sprsmdl Sparse modeling toolkit
2013-03-27 farsi Translate integers into persian
2013-03-27 meteogRam Tools for plotting meteograms
2013-03-27 RPostgreSQL R interface to the PostgreSQL database system
2013-03-27 severity Mayo's Post-data Severity Evaluation
2013-03-26 Bayesthresh Bayesian thresholds mixed-effects models for categorical data
2013-03-26 HI Simulation from distributions supported by nested hyperplanes
2013-03-26 spatialkernel Nonparameteric estimation of spatial segregation in a multivariate point process
2013-03-25 gaoptim Genetic Algorithm optimization for real-based and permutation-based problems
2013-03-25 HAP.ROR Recursive Organizer (ROR)
2013-03-25 hashFunction A collection of non-cryptographic hash functions
2013-03-25 PMA Penalized Multivariate Analysis
2013-03-23 crimCV Group-Based Modelling of Longitudinal Data
2013-03-23 flsa Path algorithm for the general Fused Lasso Signal Approximator
2013-03-23 hcc Hidden correlation check
2013-03-22 orientlib Support for orientation data
2013-03-21 MSeasyTkGUI MSeasy Tcl/Tk Graphical User Interface
2013-03-20 DATforDCEMRI Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI
2013-03-20 MSeasy Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS) data
2013-03-20 rCarto This package builds maps with a full cartographic layout
2013-03-19 AnalyzeFMRI Functions for analysis of fMRI datasets stored in the ANALYZE or NIFTI format
2013-03-19 BiplotGUI Interactive Biplots in R
2013-03-19 DeducerExtras Additional dialogs and functions for Deducer
2013-03-19 QCAGUI QCA Graphical User Interface
2013-03-19 tpe Tree preserving embedding
2013-03-18 crossdes Construction of Crossover Designs
2013-03-18 cvplogistic Penalized Logistic Regression Model using Majorization Minimization by Coordinate Descent (MMCD) Algorithm
2013-03-18 marqLevAlg An algorithm for least-squares curve fitting
2013-03-18 MixtureInf Inference for Finite Mixture Models
2013-03-17 ensembleMOS Ensemble Model Output Statistics
2013-03-16 FitAR Subset AR Model Fitting
2013-03-15 fImport Rmetrics - Economic and Financial Data Import
2013-03-14 BlockMessage Creates strings that show a text message in 8 by 8 block letters
2013-03-14 CUMP Analyze Multivariate Phenotypes by Combining Univariate results
2013-03-14 fpp Data for "Forecasting: principles and practice"
2013-03-14 GriegSmith Uses Grieg-Smith method on 2 dimentional spatial data
2013-03-14 hsicCCA Canonical Correlation Analysis based on Kernel Independence Measures
2013-03-13 BayHap Bayesian analysis of haplotype association using Markov Chain Monte Carlo
2013-03-13 dixon Nearest Neighbour Contingency Table Analysis
2013-03-13 miscTools Miscellaneous Tools and Utilities
2013-03-13 mpmcorrelogram Multivariate Partial Mantel Correlogram
2013-03-13 perry Resampling-based prediction error estimation for regression models
2013-03-13 swamp Visualization, analysis and adjustment of high-dimensional data in respect to sample annotations
2013-03-12 ber Batch Effects Removal
2013-03-12 kappaSize Sample Size Estimation Functions for Studies of Interobserver Agreement
2013-03-12 qtlmt Tools for mapping multiple complex traits
2013-03-11 cosso Fit Regularized Nonparametric Regression Models Using COSSO Penalty
2013-03-11 patchPlot Scatterplots of image patches
2013-03-11 semisupKernelPCA Kernel PCA projection, and semi-supervised variant
2013-03-08 BBMM Brownian bridge movement model
2013-03-08 EpiEstim EpiEstim: a package to estimate time varying reproduction numbers from epidemic curves
2013-03-08 nls2 Non-linear regression with brute force
2013-03-07 GESTr Gene Expression State Transformation
2013-03-07 LDOD Finding Locally D-optimal optimal designs for some nonlinear and generalized linear models
2013-03-06 IM Orthogonal Moment Analysis
2013-03-04 bifactorial Inferences for bi- and trifactorial trial designs
2013-03-04 MAR1 Multivariate Autoregressive Modeling for Analysis of Community Time-Series Data
2013-03-04 nets Network Estimation for Time Series
2013-03-04 StandardizeText Standardize Text
2013-03-04 survexp.fr Relative survival, AER and SMR based on French death rates
2013-03-01 AtmRay Acoustic Traveltime Calculations for 1-D Atmospheric Models
2013-03-01 perARMA Package for Periodic Time Series Analysis
2013-03-01 sgeostat An Object-oriented Framework for Geostatistical Modeling in S+
2013-02-28 heatex Heat exchange calculations during physical activity
2013-02-28 het.test White's Test for Heteroskedasticity
2013-02-28 MOJOV Mojo Variants: Rare Variants analysis
2013-02-28 norm Analysis of multivariate normal datasets with missing values
2013-02-27 HDMD Statistical Analysis Tools for High Dimension Molecular Data (HDMD)
2013-02-26 estout Estimates Output
2013-02-26 fso Fuzzy Set Ordination
2013-02-26 orclus ORCLUS subspace clustering
2013-02-25 cubature Adaptive multivariate integration over hypercubes
2013-02-25 EBMAforecast Ensemble BMA Forecasting
2013-02-25 intcox Iterated Convex Minorant Algorithm for interval censored event data
2013-02-25 iWeigReg Improved methods for causal inference and missing data problems
2013-02-25 ror Robust Ordinal Regression MCDA library
2013-02-25 smcUtils Utility functions for sequential Monte Carlo
2013-02-25 tsbugs Create time series BUGS models
2013-02-23 conf.design Construction of factorial designs
2013-02-23 fit.models fit.models
2013-02-22 cheb Discrete Linear Chebyshev Approximation
2013-02-22 epade Easy Plots
2013-02-22 MEET MEET: Motif Elements Estimation Toolkit
2013-02-22 nonparaeff Nonparametric Methods for Measuring Efficiency and Productivity
2013-02-22 triangle Provides the standard distribution functions for the triangle distribution
2013-02-21 Digiroo2 An application programming interface for generating null models of social contacts based on individuals' space use
2013-02-21 DMR Delete or Merge Regressors for linear model selection
2013-02-21 hash Full feature implementation of hash/associated arrays/dictionaries
2013-02-21 RSAP SAP Netweaver RFC connector for R
2013-02-19 designGG Computational tool for designing genetical genomics experiments
2013-02-17 audiolyzR audiolyzR: Give your data a listen
2013-02-17 catenary Fits a catenary to given points
2013-02-17 GetR GetR: Calculate Guttman error trees in R
2013-02-16 HIest Hybrid index estimation
2013-02-16 multinomRob Robust Estimation of Overdispersed Multinomial Regression Models
2013-02-15 Iboot Iboot: iterated bootstrap tests and confidence sets
2013-02-15 smdc Document Similarity
2013-02-14 poibin The Poisson Binomial Distribution
2013-02-14 survC1 C-statistics for risk prediction models with censored survival data
2013-02-11 ash David Scott's ASH routines
2013-02-11 gensemble generalized ensemble methods
2013-02-11 mmeln MMELN : Estimation of multinormal mixture distribution
2013-02-09 bayess Bayesian Essentials with R
2013-02-09 Compounding Computing Continuous Distributions
2013-02-09 modiscloud R tools for processing Level 2 Cloud Mask products from MODIS
2013-02-08 PVR Computes phylogenetic eigenvectors regression (PVR) and phylogenetic signal-representation curve (PSR) (with null and Brownian expectations)
2013-02-08 ternvis Visualisation, verification and calibration of ternary probabilistic forecasts
2013-02-07 beadarrayFilter Bead filtering for Illumina bead arrays
2013-02-07 debug MVB's debugger for R
2013-02-07 galts Genetic algorithms and C-steps based LTS (Least Trimmed Squares) estimation
2013-02-07 NestedCohort Survival Analysis for Cohorts with Missing Covariate Information
2013-02-07 nlsmsn Fitting nonlinear models with scale mixture of skew-normal distributions
2013-02-07 orddom Ordinal Dominance Statistics
2013-02-06 ExactPath Exact solution paths for regularized LASSO regressions with L_1 penalty
2013-02-06 glmpath L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
2013-02-06 stoichcalc R Functions for Solving Stoichiometric Equations
2013-02-05 exactLoglinTest Monte Carlo Exact Tests for Log-linear models
2013-02-05 fractalrock Generate fractal time series with non-normal returns distribution
2013-02-05 gaussquad Collection of functions for Gaussian quadrature
2013-02-05 ghyp A package on the generalized hyperbolic distribution and its special cases
2013-02-05 pacbpred PAC-Bayesian Estimation and Prediction in Sparse Additive Models
2013-02-04 infoDecompuTE Information Decomposition of Two-phase Experiments
2013-02-04 OOmisc Ozgur-Ozlem Miscellaneous
2013-02-04 orthopolynom Collection of functions for orthogonal and orthonormal polynomials
2013-02-04 timeit Easy profiling of R functions
2013-02-03 pdist Partitioned Distance Function
2013-02-03 TimeProjection Time Projections
2013-02-01 nCDunnett Noncentral Dunnett's test distribution
2013-01-30 mlearning Machine learning algorithms with unified interface and confusion matrices
2013-01-30 randomGLM Random General Linear Model Prediction
2013-01-30 rdryad Dryad API interface
2013-01-30 YieldCurve Modelling and estimation of the yield curve
2013-01-29 DivMelt HRM Diversity Assay Analysis Tool
2013-01-29 EMT Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data
2013-01-29 SUE Subsampling method
2013-01-28 deal Learning Bayesian Networks with Mixed Variables
2013-01-28 RcmdrPlugin.plotByGroup Rcmdr plots by group using lattice
2013-01-28 seqPERM Generates a permutation matrix based upon a sequence
2013-01-28 svSweave SciViews GUI API - Sweave functions
2013-01-27 bclust Bayesian clustering using spike-and-slab hierarchical model, suitable for clustering high-dimensional data
2013-01-27 labeltodendro Convert labels or tables to a dendrogram
2013-01-26 emme2 Read and Write to an EMME/2 databank
2013-01-26 shapefiles Read and Write ESRI Shapefiles
2013-01-26 UWHAM Unbinned weighted histogram analysis method (UWHAM)
2013-01-25 FI Provide functions for forest inventory calculations
2013-01-25 metatest Fit and test metaregression models
2013-01-25 misc3d Miscellaneous 3D Plots
2013-01-25 pln Polytomous logit-normit (graded logistic) model estimation
2013-01-25 RcmdrPlugin.TeachingDemos Rcmdr Teaching Demos Plug-In
2013-01-24 dichromat Color Schemes for Dichromats
2013-01-24 medSTC A max-margin supervised Sparse Topical Coding Model
2013-01-24 RcmdrPlugin.SLC SLC Rcmdr Plug-in
2013-01-24 SLC Slope and level change
2013-01-23 RcmdrPlugin.KMggplot2 An Rcmdr Plug-In for Kaplan-Meier Plots and Other Plots by Using the ggplot2 Package
2013-01-23 sirad Functions for calculating daily solar radiation and evapotranspiration
2013-01-21 contfrac Continued fractions
2013-01-21 gemtc.jar GeMTC Java binary
2013-01-21 MM The multiplicative multinomial distribution
2013-01-21 multipol multivariate polynomials
2013-01-21 Oarray Arrays with arbitrary offsets
2013-01-21 RcmdrPlugin.orloca orloca Rcmdr Plug-in
2013-01-21 semPLS Structural Equation Modeling Using Partial Least Squares
2013-01-21 stellaR stellar evolution tracks and isochrones
2013-01-21 TeachingDemos Demonstrations for teaching and learning
2013-01-19 adaptsmoFMRI Adaptive Smoothing of FMRI Data
2013-01-19 currentSurvival Estimation of CCI and CLFS Functions
2013-01-19 RcppXts Interface the xts API via Rcpp
2013-01-18 BCBCSF Bias-corrected Bayesian Classification with Selected Features
2013-01-18 blockrand Randomization for block random clinical trials
2013-01-18 CVThresh Level-Dependent Cross-Validation Thresholding
2013-01-18 edcc Economic Design of Control Charts
2013-01-18 obsSens Sensitivity analysis for Observational studies
2013-01-18 partitionMap Partition Maps
2013-01-17 GWG Calculation of probabilities for inadequate and excessive gestational weight gain
2013-01-16 Bhat General likelihood exploration
2013-01-16 RcppExamples Examples using Rcpp to interface R and C++
2013-01-16 rms.gof Root-mean-square goodness-of-fit test for simple null hypothesis
2013-01-16 spacodiR Spatial and Phylogenetic Analysis of Community Diversity
2013-01-15 SMPracticals Practicals for use with Davison (2003) Statistical Models
2013-01-14 ESG ESG - A package for asset projection
2013-01-14 samplingbook Survey Sampling Procedures
2013-01-14 subtype Cluster analysis to find molecular subtypes and their assessment
2013-01-14 xoi Tools for analyzing crossover interference
2013-01-13 survivalROC Time-dependent ROC curve estimation from censored survival data
2013-01-12 pass Prediction and Stability Selection of Tuning Parameters
2013-01-11 gtx Genetics ToolboX
2013-01-11 orloca.es Spanish version of orloca package
2013-01-09 BioPhysConnectoR BioPhysConnectoR
2013-01-09 PROTOLIDAR PRocess TOol LIdar DAta in R
2013-01-09 RcmdrPlugin.mosaic Adds menu items to produce mosaic plots and assoc plots to Rcmdr
2013-01-08 hier.part Hierarchical Partitioning
2013-01-08 RcmdrPlugin.seeg Rcmdr Plugin for seeg
2013-01-07 displayHTS displayHTS
2013-01-07 stacomirtools stacomi ODBC connection class
2013-01-05 GWASExactHW Exact Hardy-Weinburg testing for Genome Wide Association Studies
2013-01-05 Stat2Data Datasets for Stat2
2013-01-04 proteomicdesign Optimization of a multi-stage proteomic study
2013-01-04 seeg Statistics for Environmental Sciences, Engineering, and Geography
2013-01-04 sparcl Perform sparse hierarchical clustering and sparse k-means clustering
2013-01-03 ldlasso LD LASSO Regression for SNP Association Study
2013-01-03 partialOR Partial Odds Ratio
2012-12-31 RcmdrPlugin.SM Rcmdr Sport Management Plug-In
2012-12-30 RcppClassicExamples Examples using RcppClassic to interface R and C++
2012-12-30 SPSL Site Percolation on Square Lattice (SPSL)
2012-12-29 psytabs Produce well-formatted tables for psychological research
2012-12-28 trapezoid The Trapezoidal Distribution
2012-12-27 fgui Function GUI
2012-12-25 truncgof GoF tests allowing for left truncated data
2012-12-24 MedOr Median Ordering Statistical R package
2012-12-24 MOCCA Multi-objective optimization for collecting cluster alternatives
2012-12-23 RXKCD Get XKCD comic from R
2012-12-23 svmpath svmpath: the SVM Path algorithm
2012-12-22 DiversitySampler Functions for re-sampling a community matrix to compute diversity indices at different sampling levels
2012-12-22 dyn Time Series Regression
2012-12-22 MetaQC MetaQC: Objective Quality Control and Inclusion/Exclusion Criteria for Genomic Meta-Analysis
2012-12-22 proto Prototype object-based programming
2012-12-21 BurStMisc Burns Statistics miscellaneous
2012-12-21 imputeMDR The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data
2012-12-21 Lock5Data Datasets for "Statistics: UnLocking the Power of Data"
2012-12-21 mvinfluence Influence Measures and Diagnostic Plots for Multivariate Linear Models
2012-12-21 mvnmle ML estimation for multivariate normal data with missing values
2012-12-21 NSA Post-normalization of total copy numbers
2012-12-21 ORMDR ORMDR
2012-12-21 ReCiPa Redundancy Control in Pathways databases
2012-12-20 hbmem Hierarchical Bayesian Analysis of Recognition Memory
2012-12-19 Kpart Spline Fitting
2012-12-19 nose nose Package for R
2012-12-17 dblcens Compute the NPMLE of distribution from doubly censored data
2012-12-17 MBESS MBESS
2012-12-16 WordPools Classical word pools used in studies of learning and memory
2012-12-15 ConjointChecks A package to check the cancellation axioms of conjoint measurement
2012-12-15 cosmoFns Functions for cosmological distances, times, luminosities, etc
2012-12-15 LeLogicielR Functions and datasets to accompany the book "Le logiciel R: Maitriser le langage, Effectuer des analyses statistiques" (french)
2012-12-14 MuFiCokriging Multi-Fidelity Cokriging models
2012-12-12 nutshell Data for "R in a Nutshell"
2012-12-12 nutshell.audioscrobbler Audioscrobbler data for "R in a Nutshell"
2012-12-12 nutshell.bbdb Baseball Database for "R in a Nutshell"
2012-12-12 OptInterim Optimal Two and Three Stage Designs for Single-Arm and Two-Arm Randomized Controlled Trials with a Long-Term Binary Endpoint
2012-12-11 IndependenceTests Nonparametric tests of independence between random vectors
2012-12-10 ftnonpar Features and Strings for Nonparametric Regression
2012-12-10 SampleSizeMeans Sample size calculations for normal means
2012-12-08 RDIDQ It perform Quality check on data
2012-12-08 rpartScore Classification trees for ordinal responses
2012-12-07 MultinomialCI Simultaneous confidence intervals for multinomial proportions according to the method by Sison and Glaz
2012-12-05 gtable Arrange grobs in tables
2012-12-05 simba A Collection of functions for similarity analysis of vegetation data
2012-12-04 glmc Fitting Generalized Linear Models Subject to Constraints
2012-12-04 source.gist Read R code from a GitHub Gist
2012-12-03 KMsurv Data sets from Klein and Moeschberger (1997), Survival Analysis
2012-12-03 muma Metabolomics Univariate and Multivariate Analysis
2012-12-02 brainwaver Basic wavelet analysis of multivariate time series with a visualisation and parametrisation using graph theory
2012-12-02 emdist Earth Mover's Distance
2012-12-02 fracdiff Fractionally differenced ARIMA aka ARFIMA(p,d,q) models
2012-12-01 ffmanova Fifty-fifty MANOVA
2012-12-01 sybilDynFBA Dynamic FBA : dynamic flux balance analysis
2012-11-30 gcookbook Data for "R Graphics Cookbook"
2012-11-28 plmm Partially Linear Mixed Effects Model
2012-11-27 bootRes Bootstrapped Response and Correlation Functions
2012-11-27 JASPAR R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
2012-11-27 TFX R API to TrueFX(tm)
2012-11-26 distfree.cr Distribution-free confidence region (distfree.cr)
2012-11-26 maptree Mapping, pruning, and graphing tree models
2012-11-25 gRc Inference in Graphical Gaussian Models with Edge and Vertex Symmetries
2012-11-24 pairedCI Confidence intervals for the ratio of locations and for the ratio of scales of two paired samples
2012-11-24 stepwise Stepwise detection of recombination breakpoints
2012-11-21 rich Computes and compares species richnesses
2012-11-20 ChoiceModelR Choice Modeling in R
2012-11-20 sciplot Scientific Graphing Functions for Factorial Designs
2012-11-20 stppResid Perform residual analysis on space-time point process models
2012-11-20 tnet tnet: Software for Analysis of Weighted, Two-mode, and Longitudinal networks
2012-11-17 BAEssd Bayesian Average Error approach to Sample Size Determination
2012-11-15 epibasix Elementary Epidemiological Functions for Epidemiology and Biostatistics
2012-11-15 PAWL Implementation of the PAWL algorithm
2012-11-14 bindata Generation of Artificial Binary Data
2012-11-14 linLIR linear Likelihood-based Imprecise Regression
2012-11-13 ade4TkGUI ade4 Tcl/Tk Graphical User Interface
2012-11-13 adimpro Adaptive Smoothing of Digital Images
2012-11-13 mixcat Mixed effects cumulative link and logistic regression models
2012-11-13 plsdepot Partial Least Squares (PLS) Data Analysis Methods
2012-11-13 TSA Time Series Analysis
2012-11-11 egonet Tool for ego-centric measures in Social Network Analysis
2012-11-11 lcd Learn Chain graphs via Decomposition
2012-11-11 nlt A nondecimated lifting transform for signal denoising
2012-11-09 apTreeshape Analyses of Phylogenetic Treeshape
2012-11-09 STAR Spike Train Analysis with R
2012-11-08 mtsdi Multivariate time series data imputation
2012-11-07 Davies The Davies quantile function
2012-11-07 fExoticOptions Exotic Option Valuation
2012-11-07 ResistorArray electrical properties of resistor networks
2012-11-07 waved Wavelet Deconvolution
2012-11-06 adlift An adaptive lifting scheme algorithm
2012-11-05 CHsharp Choi and Hall Clustering in 3d
2012-11-05 homtest Homogeneity tests for Regional Frequency Analysis
2012-11-05 scagnostics Compute scagnostics - scatterplot diagnostics
2012-11-03 mlica2 Independent Component Analysis using Maximum Likelihood
2012-11-03 tableplot Represents tables as semi-graphic displays
2012-11-02 frmqa The Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance
2012-11-02 IDPmisc Utilities of Institute of Data Analyses and Process Design (www.idp.zhaw.ch)
2012-11-02 mratios Inferences for ratios of coefficients in the general linear model
2012-11-02 smirnov Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book
2012-11-01 argosfilter Argos locations filter
2012-11-01 fpow Computing the noncentrality parameter of the noncentral F distribution
2012-11-01 SwissAir Air Quality Data of Switzerland for one year in 30 min Resolution
2012-11-01 xgobi Interface to the XGobi and XGvis programs for graphical data analysis
2012-10-31 dynCorr Dynamic Correlation Package
2012-10-31 NORMT3 Evaluates complex erf, erfc, Faddeeva, and density of sum of Gaussian and Student's t
2012-10-31 waveband Computes credible intervals for Bayesian wavelet shrinkage
2012-10-30 Actigraphy Actigraphy Data Analysis
2012-10-30 cat Analysis of categorical-variable datasets with missing values
2012-10-30 cudaBayesregData Data sets for the examples used in the package "cudaBayesreg"
2012-10-30 degenes Detection of differentially expressed genes
2012-10-30 fma Data sets from "Forecasting: methods and applications" by Makridakis, Wheelwright & Hyndman (1998)
2012-10-30 ScreenClean Screen and clean variable selection procedures
2012-10-30 speff2trial Semiparametric efficient estimation for a two-sample treatment effect
2012-10-29 ACCLMA ACC & LMA Graph Plotting
2012-10-29 AdaptFit Adaptive Semiparametic Regression
2012-10-29 Agreement Statistical Tools for Measuring Agreement
2012-10-29 allan