baitmet: Library Driven Compound Profiling in GC-MS Data

Automated quantification of metabolites by targeting mass spectral/retention time libraries into full scan-acquired gas chromatography - mass spectrometry (GC-MS) chromatograms. Baitmet outputs a table with compounds name, spectral matching score, retention index error, and compounds area in each sample. Baitmet can automatically determine the compounds retention indexes with or without co-injection of internal standards with samples.

Version: 1.0.0
Depends: Rcpp, erah (≥ 1.0.5)
Imports: osd, HiClimR, XML, signal, methods
Suggests: R.rsp, mzR
Published: 2017-01-14
Author: Xavier Domingo-Almenara, Alexandre Perera-Lluna, Gabriel Vivo-Truyols, Gabriela Venturini, Maria Vinaixa, Jesus Brezmes.
Maintainer: Xavier Domingo-Almenara <xdomingo at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Materials: NEWS
CRAN checks: baitmet results


Reference manual: baitmet.pdf
Vignettes: BaitMet Manual
Package source: baitmet_1.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: baitmet_1.0.0.tgz
OS X Mavericks binaries: r-oldrel: baitmet_1.0.0.tgz


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