clusthaplo: Clustering of haplotypes

Performs clustering of haplotypes that ought to share a common ancestor. It is based on the similarity measures of every pair of haplotypes using a sliding window along the genome.

Version: 1.2
Depends: R (≥ 2.14), ggplot2, grid
Suggests: RHmm
Published: 2013-07-05
Author: Damien Leroux [aut, cre], Brigitte Mangin [aut], Sylvain Jasson [aut], Abdelaziz Rahmani [aut]
Maintainer: Damien Leroux <damien.leroux at toulouse.inra.fr>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://www.r-project.org, https://mulcyber.toulouse.inra.fr/projects/clusthaplo/
NeedsCompilation: no
Citation: NA
Materials: NA
CRAN checks: clusthaplo results

Downloads:

Reference manual: clusthaplo.pdf
Package source: clusthaplo_1.2.tar.gz
Windows binaries: r-devel: clusthaplo_1.2.zip, r-release: clusthaplo_1.2.zip, r-oldrel: clusthaplo_1.2.zip
OS X Snow Leopard binaries: r-release: clusthaplo_1.2.tgz, r-oldrel: clusthaplo_1.2.tgz
OS X Mavericks binaries: r-release: clusthaplo_1.2.tgz
Old sources: clusthaplo archive