colorednoise: Simulate Temporally Autocorrelated Population Time Series

Temporally autocorrelated populations are correlated in their vital rates (growth, death, etc.) from year to year. It is very common for populations, whether they be bacteria, plants, or humans, to be temporally autocorrelated. This poses a challenge for stochastic population modeling, because a temporally correlated population will behave differently from an uncorrelated one. This package provides tools for simulating populations with white noise (no temporal autocorrelation), red noise (positive temporal autocorrelation), and blue noise (negative temporal autocorrelation). The algebraic formulation for autocorrelated noise comes from Ruokolainen et al. (2009) <doi:10.1016/j.tree.2009.04.009>. The simulations are based on an assumption of an asexually reproducing population, but it can also be used to simulate females of a sexually reproducing species.

Version: 0.0.1
Depends: R (≥ 3.3.2)
Imports: dplyr (≥ 0.7.3), purrr (≥ 0.2.3), stats (≥ 3.3.2)
Suggests: ggplot2 (≥ 2.2.1), knitr (≥ 1.17), rmarkdown (≥ 1.6), testthat (≥ 1.0.2)
Published: 2017-10-10
Author: Julia Pilowsky [aut, cre], Elizabeth Crone [ctb]
Maintainer: Julia Pilowsky <jap2178 at>
License: GPL-3
NeedsCompilation: no
Materials: README
CRAN checks: colorednoise results


Reference manual: colorednoise.pdf
Vignettes: Simulate noise
Package source: colorednoise_0.0.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: colorednoise_0.0.1.tgz
OS X Mavericks binaries: r-oldrel: colorednoise_0.0.1.tgz


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