R build status

covid19jp : R package for Japanese Covid-19 Datasets

This package provides ready to use Japanese covid-19 datasets.

Notes

Installation

# From CRAN (may not be latest dataset)
instal.packages("covid19jp")

# Install the development version from GitHub
devtools::install_github("kj-9/covid19jp", ref = "master")

We update datasets in devolpment version daily. To get latest datasets, run update_date.

# update your datasets
covid19jp::update_data()

Dataset detail

japan_daily

Columns

name description description in Japanese
date Date in JST 日本時間での日付
tests Number of tests PCR 検査実施人数
newCases Number of new cases 陽性者数
activeCases Number of current active cases 入院治療等を要する者の数
severeCases Number of current severe cases 重症者数
recovered Total number of recovered cases 退院又は療養解除となった者の数(累積)
deaths Total number of deaths 死亡者数(累積)
rt Effective reproduction number 実効再生産数

Data Source

pref_daily

Columns

name description description in Japanese
prefCode Prefecture code 都道府県番号
prefJP Prefecture name in Japanese 都道府県名(日本語)
prefEN Prefecture name in English 都道府県名(英語)
date Date in JST 日本時間での日付
tests Total number of tests PCR 検査実施人数 (累積)
newCases Total number of new cases 陽性者数(累積)
activeCases Number of current active cases 入院治療等を要する者の数
severeCases Number of current severe cases 重症者数
recovered Total number of recovered cases 退院又は療養解除となった者の数(累積)
deaths Total number of deaths 死亡者数(累積)
rt Effective reproduction number 実効再生産数

Data Source

pref_weekly

Currently, only dataset after 2020-09-02 is available.

Columns

name description description in Japanese
prefCode prefecture code 都道府県番号
prefJP Name of the prefecture in Japanese 都道府県名(日本語)
prefEN Name of the prefecture in English 都道府県名(英語)
date Date in JST 日本時間での日付
activeCases Number of current active cases 入院治療等を要する者の数
hospitalizedCases Number of current hospitalized cases 入院者数(入院確定者数を含む)
hospitalizedCasesPhase Current alert phase level for hospitalized cases 入院者現フェーズ
hospitalizedCasesMaxPhase Maximum alert phase level for hospitalized cases 入院者最終フェーズ
hospitalizedCasesCap Current bed capacity for hospitalized cases 入院者確保病床数
hospitalizedCasesCapPlanned Bed capacity for hospitalized cases planned for the maximum alert phase 最終フェーズにおける入院者即応病床(計画)数
hospitalizedCasesUTE Current hospital (bed) utilization rate for hospitalized cases 確保病床数に対する入院者使用率
severeCases Number of current severe cases 重症者数
severeCasesPhase Current alert phase level for severe cases 重症者現フェーズ
severeCasesMaxPhase Maximum alert phase level for severe cases 重症者最終フェーズ
severeCasesCap Current bed capacity for severe cases 重症者確保病床数
severeCaseaCapPlanned Bed capacity for severe cases planned for the maximum alert phase 最終フェーズにおける重症者即応病床(計画)数
severeCasesUTE Current hospital (bed) utilization rate for severe cases 確保病床数に対する重症者使用率
atHotelCases Number of current cases staying at hotels (or other accommodation facilities) 宿泊療養者数
atHotelCasesPhase Current alert phase level for cases staying at hotels 宿泊療養現フェーズ
atHotelCasesMaxPhase Maximum alert phase level for cases staying at hotels 宿泊療養最終フェーズ
atHotelCasesCap Current room capacity for cases staying at hotels 宿泊療養確保居室数
atHotelCasesCapPlanned Room capacity for cases staying at hotels planned for the maximum alert phase 最終フェーズにおける宿泊療養施設居室(計画)数
atHotelCasesUTE Current hotel (room) utilization rate for cases staying at hotels 確保居室数に対する宿泊療養者使用率
atHomeCases Number of current cases staying at home 自宅療養者数
atWelfareFacilityCases Number of current cases staying at welfare facilities 社会福祉施設等療養者数
unconfirmedCases Number of current unconfirmed cases 確認中の人数

Data Source

pref

Columns

name description description in Japanese
prefCode Prefecture code 都道府県番号
prefJP Prefecture name in Japanese 都道府県名(日本語)
prefEN Prefecture name in English 都道府県名(英語)
population Population estimate in thousands in 2018 2018 年推計人口(千人)

Data Source

Reference

The function update_data is heavily referred to coronavirus package. Thanks!