disco: Discordance and Concordance of Transcriptomic Responses

Concordance and discordance of homologous gene regulation allows comparing reaction to stimuli in different organisms, for example human patients and animal models of a disease. The package contains functions to calculate discordance and concordance score for homologous gene pairs, identify concordantly or discordantly regulated transcriptional modules and visualize the results. It is intended for analysis of transcriptional data.

Version: 0.5
Depends: R (≥ 2.10)
Imports: methods, ggplot2, tmod, RColorBrewer
Published: 2017-03-03
Author: Teresa Domaszewska [aut, cre], January Weiner [aut]
Maintainer: Teresa Domaszewska <domaszewska at mpiib-berlin.mpg.de>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)]
NeedsCompilation: no
CRAN checks: disco results

Downloads:

Reference manual: disco.pdf
Package source: disco_0.5.tar.gz
Windows binaries: r-devel: disco_0.5.zip, r-release: disco_0.5.zip, r-oldrel: disco_0.5.zip
OS X Mavericks binaries: r-release: disco_0.5.tgz, r-oldrel: disco_0.5.tgz

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