To cite the R package 'ebdbn' in publications use:

A. Rau, F. Jaffrezic, J.-L. Foulley, R. W. Doerge (2010). An empirical Bayesian method for estimating biological networks from temporal microarray data. Statistical Applications in Genetics and Molecular Biology, vol. 9, iss. 1, article 9.

Corresponding BibTeX entry:

  @Article{,
    title = {An empirical Bayesian method for estimating biological
      networks from temporal microarray data},
    journal = {Statistical Applications in Genetics and Molecular
      Biology},
    volume = {9},
    number = {1},
    year = {2010},
    author = {Andrea Rau and Florence Jaffrezic and Jean-Louis Foulley
      and Rebecca Doerge},
  }