exp2flux: Convert Gene EXPression Data to FBA FLUXes

For a given metabolic model with well formed Gene-Protein-Reaction (GPR) associations and an expressionSet with their associated gene expression values, this package converts gene expression values to the FBA boundaries for each reaction based in the boolean rules described in its associated GPR.

Version: 0.1
Imports: sybil, gage, igraph
Suggests: Biobase
Published: 2016-10-11
Author: Daniel Osorio[aut,cre], Kelly Botero[aut,cre], Janneth Gonzalez[aut], Andres Pinzon[aut]
Maintainer: Daniel Osorio <dcosorioh at unal.edu.co>
License: GPL-2
NeedsCompilation: no
Materials: README
CRAN checks: exp2flux results

Downloads:

Reference manual: exp2flux.pdf
Package source: exp2flux_0.1.tar.gz
Windows binaries: r-devel: exp2flux_0.1.zip, r-release: exp2flux_0.1.zip, r-oldrel: exp2flux_0.1.zip
OS X Mavericks binaries: r-release: exp2flux_0.1.tgz, r-oldrel: not available

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