hsphase: Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data

Version: 2.0.1
Depends: snowfall, R (≥ 3.1.0)
Imports: Rcpp
LinkingTo: RcppArmadillo (≥ 0.4.300.8.0), Rcpp (≥ 0.11.2)
Published: 2015-01-10
Author: Mohammad Ferdosi, Cedric Gondro
Maintainer: Mohammad Ferdosi <mferdosi at myune.edu.au>
License: GPL (≥ 3)
NeedsCompilation: yes
Citation: hsphase citation info
CRAN checks: hsphase results

Downloads:

Reference manual: hsphase.pdf
Vignettes: A brief vignette to illustrate the usage of the main functions of hsphase
Package source: hsphase_2.0.1.tar.gz
Windows binaries: r-devel: hsphase_2.0.1.zip, r-release: hsphase_2.0.1.zip, r-oldrel: hsphase_2.0.1.zip
OS X Snow Leopard binaries: r-release: hsphase_2.0.1.tgz, r-oldrel: hsphase_2.0.1.tgz
OS X Mavericks binaries: r-release: hsphase_2.0.1.tgz
Old sources: hsphase archive