iC10TrainingData: Training datasets for iC10 package

Training datasets for iC10; which implements the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.

Version: 1.0.1
Published: 2014-09-26
Author: Oscar M Rueda
Maintainer: Oscar M. Rueda <Oscar.Rueda at cruk.cam.ac.uk>
License: GPL-3
NeedsCompilation: no
CRAN checks: iC10TrainingData results

Downloads:

Reference manual: iC10TrainingData.pdf
Package source: iC10TrainingData_1.0.1.tar.gz
Windows binaries: r-devel: iC10TrainingData_1.0.1.zip, r-release: iC10TrainingData_1.0.1.zip, r-oldrel: iC10TrainingData_1.0.1.zip
OS X El Capitan binaries: r-release: iC10TrainingData_1.0.1.tgz
OS X Mavericks binaries: r-oldrel: iC10TrainingData_1.0.1.tgz
Old sources: iC10TrainingData archive

Reverse dependencies:

Reverse depends: iC10

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