lmem.qtler: Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis

Performs QTL mapping analysis for balanced and for multi-environment and multi-trait analysis using mixed models. Balanced population, single trait, single environment QTL mapping is performed through marker-regression (Haley and Knott (1992) <doi:10.1038/hdy.1992.131>, Martinez and Curnow (1992) <doi:10.1007/BF00222330>, while multi-environment and multi-trait QTL mapping is performed through linear mixed models. These functions could use any of the following populations: double haploid, F2, recombinant inbred lines, back-cross, and 4-way crosses. Performs a Single Marker Analysis, a Single Interval Mapping, or a Composite Interval Mapping analysis, and then constructs a final model with all of the relevant QTL.

Version: 0.1.1
Depends: R (≥ 2.10)
Imports: qtl, lme4, lattice, pastecs, stringr, graphics, utils, grDevices, stats
Suggests: knitr, rmarkdown, testthat
Published: 2016-07-12
Author: Lucia Gutierrez [aut], Gaston Quero [aut, cre], Schubert Fernandez [aut], Sofia Brandariz [aut], Sebastian Simondi [ctb]
Maintainer: Gaston Quero <gastonquero at gmail.com>
License: GPL-3
NeedsCompilation: no
Citation: lmem.qtler citation info
CRAN checks: lmem.qtler results

Downloads:

Reference manual: lmem.qtler.pdf
Vignettes: Vignette Title
Package source: lmem.qtler_0.1.1.tar.gz
Windows binaries: r-devel: lmem.qtler_0.1.1.zip, r-release: lmem.qtler_0.1.1.zip, r-oldrel: lmem.qtler_0.1.1.zip
OS X Mavericks binaries: r-release: lmem.qtler_0.1.1.tgz, r-oldrel: lmem.qtler_0.1.1.tgz
Old sources: lmem.qtler archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=lmem.qtler to link to this page.