metacoder: Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data

A set of tools for parsing, manipulating, and graphing data classified by a hierarchy (e.g. a taxonomy).

Version: 0.2.0
Depends: R (≥ 3.0.2), taxa
Imports: stringr, ggplot2, igraph, scales, grid, taxize, seqinr, reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape, stats, grDevices, utils, lazyeval, dplyr, magrittr, readr, rlang, biomformat, phylotate, ggfittext, vegan, ggrepel, cowplot, GA, Rcpp
LinkingTo: Rcpp
Suggests: knitr, rmarkdown, testthat, BiocInstaller, zlibbioc
Published: 2018-01-05
Author: Zachary Foster [aut, cre], Niklaus Grunwald [ths]
Maintainer: Zachary Foster <zacharyfoster1989 at gmail.com>
BugReports: https://github.com/grunwaldlab/metacoder/issues
License: GPL-2 | GPL-3
URL: https://grunwaldlab.github.io/metacoder_documentation/
NeedsCompilation: yes
Citation: metacoder citation info
Materials: README NEWS
CRAN checks: metacoder results

Downloads:

Reference manual: metacoder.pdf
Vignettes: An introduction to metacoder
Package source: metacoder_0.2.0.tar.gz
Windows binaries: r-prerel: metacoder_0.2.0.zip, r-release: metacoder_0.2.0.zip, r-oldrel: metacoder_0.2.0.zip
OS X binaries: r-prerel: metacoder_0.2.0.tgz, r-release: metacoder_0.2.0.tgz
Old sources: metacoder archive

Linking:

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