miLineage: Association Tests for Microbial Lineages on a Taxonomic Tree

A variety of association tests for microbiome data analysis including Quasi-Conditional Association Tests (QCAT) described in Tang Z.-Z. et al.(2017) <doi:10.1093/bioinformatics/btw804> and Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) tests described in Tang Z.-Z. & Chen G. (2017, submitted).

Version: 2.1
Depends: R (≥ 3.1.1), MASS, data.table, geepack
Published: 2018-03-23
DOI: 10.32614/CRAN.package.miLineage
Author: Zheng-Zheng Tang
Maintainer: Zheng-Zheng Tang <tang at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: miLineage results


Reference manual: miLineage.pdf


Package source: miLineage_2.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): miLineage_2.1.tgz, r-oldrel (arm64): miLineage_2.1.tgz, r-release (x86_64): miLineage_2.1.tgz, r-oldrel (x86_64): miLineage_2.1.tgz
Old sources: miLineage archive


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