mpMap2: Genetic Analysis of Multi-Parent Recombinant Inbred Lines

Constructing linkage maps, reconstructing haplotypes, estimating linkage disequilibrium and quantitative trait loci (QTL) mapping in multi-parent RIL designs (e.g. MAGIC).

Version: 1.0.1
Depends: R (≥ 3.5.0)
Imports: ggplot2, Matrix, methods, qtl, igraph, fastcluster, pryr, nnls, RColorBrewer, jsonlite, progress, stats, sn, car
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown, gridExtra, Heatplus
Published: 2020-03-02
Author: Rohan Shah [aut, cre], Emma Huang [aut], Matthew Morell [ctb], Alex Whan [ctb], Colin Cavanagh [ctb]
Maintainer: Rohan Shah <cran at bookshah.com>
License: GPL-2
NeedsCompilation: yes
SystemRequirements: C++11
Materials: README
CRAN checks: mpMap2 results

Downloads:

Reference manual: mpMap2.pdf
Vignettes: mpMap2
Package source: mpMap2_1.0.1.tar.gz
Windows binaries: r-devel: mpMap2_1.0.1.zip, r-devel-gcc8: mpMap2_1.0.1.zip, r-release: mpMap2_1.0.1.zip, r-oldrel: mpMap2_1.0.1.zip
OS X binaries: r-release: mpMap2_1.0.1.tgz, r-oldrel: mpMap2_1.0.1.tgz
Old sources: mpMap2 archive

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