msProcess: Protein Mass Spectra Processing

This package provides tools for protein mass spectra processing including data preparation, denoising, noise estimation, baseline correction, intensity normalization, peak detection, peak alignment, peak quantification, and various functionalities for data ingestion/conversion, mass calibration, data quality assessment, and protein mass spectra simulation. It also provides auxiliary tools for data representation, data visualization, and pipeline processing history recording and retrieval.

Version: 1.0.5
Depends: R (≥ 2.5.0), methods, graphics, RSQLite (≥ 0.5-6), wmtsa, robust, XML, stats
Published: 2009-01-22
Author: Lixin Gong, William Constantine, and Yu Alex Chen
Maintainer: Lixin Gong <lgong at tibco.com>
License: GNU General Public License Version 2
Copyright: 2007-2009 TIBCO Software Inc. All rights reserved.
URL: http://www.insightful.com/services/research/proteome/default.asp
In views: ChemPhys
CRAN checks: msProcess results

Downloads:

Package source: msProcess_1.0.5.tar.gz
MacOS X binary: msProcess_1.0.5.tgz
Windows binary: msProcess_1.0.5.zip
Reference manual: msProcess.pdf
Old sources: msProcess archive

Reverse dependencies:

Reverse suggests: msBreast, msDilution, msProstate