noise: Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data

Functions to calculate estimates of intrinsic and extrinsic noise from the two-reporter single-cell experiment, as in Elowitz, M. B., A. J. Levine, E. D. Siggia, and P. S. Swain (2002) Stochastic gene expression in a single cell. Science, 297, 1183-1186. Functions implement multiple estimators developed for unbiasedness or min Mean Squared Error (MSE) in Fu, A. Q. and Pachter, L. (2016). Estimating intrinsic and extrinsic noise from single-cell gene expression measurements. <http://arxiv.org/abs/1601.03334>.

Version: 1.0
Depends: R (≥ 2.10)
Imports: preprocessCore
Published: 2016-07-29
Author: Audrey Qiuyan Fu and Lior Pachter
Maintainer: Audrey Q. Fu <audreyqyfu at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: noise results

Downloads:

Reference manual: noise.pdf
Package source: noise_1.0.tar.gz
Windows binaries: r-devel: noise_1.0.zip, r-release: noise_1.0.zip, r-oldrel: noise_1.0.zip
OS X El Capitan binaries: r-release: noise_1.0.tgz
OS X Mavericks binaries: r-oldrel: noise_1.0.tgz

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