ontologySimilarity: Functions for Calculating Ontological Similarities

Functions for calculating semantic similarities between ontological terms or sets of ontological terms based on term information content and assessing statistical significance of similarity in the context of a collection of sets of ontological terms.

Version: 2.2
Depends: R (≥ 3.0.0)
Imports: Rcpp (≥ 0.11.2), ontologyIndex (≥ 2.0)
LinkingTo: Rcpp
Suggests: knitr, paintmap
Published: 2016-10-28
Author: Daniel Greene
Maintainer: Daniel Greene <dg333 at cam.ac.uk>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: ontologySimilarity results


Reference manual: ontologySimilarity.pdf
Vignettes: Gene Ontology data objects
Package source: ontologySimilarity_2.2.tar.gz
Windows binaries: r-devel: ontologySimilarity_2.2.zip, r-release: ontologySimilarity_2.2.zip, r-oldrel: ontologySimilarity_2.2.zip
OS X Mavericks binaries: r-release: ontologySimilarity_2.2.tgz, r-oldrel: ontologySimilarity_2.2.tgz
Old sources: ontologySimilarity archive

Reverse dependencies:

Reverse imports: SimReg
Reverse suggests: ontologyIndex


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