paramlink: Parametric linkage analysis in R

Parametric linkage analysis and other likelihood-based pedigree analyses based on the Elston-Stewart algorithm, including singlepoint LOD scores, power analysis and computation of marker genotype distributions. Multipoint analysis is provided through a convenient MERLIN wrapper. Includes many utility functions for creating, manipulating and plotting pedigrees, markers and linkage results.

Version: 0.9-6
Depends: R (≥ 3.0), kinship2
Imports: maxLik
Published: 2014-04-01
Author: Magnus Dehli Vigeland
Maintainer: Magnus Dehli Vigeland <magnusdv at studmed.uio.no>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
SystemRequirements: For the MERLIN wrapper, MERLIN (www.sph.umich.edu/csg/abecasis/merlin) must be installed and pointed to in the PATH environment variable.
Materials: NEWS
CRAN checks: paramlink results

Downloads:

Reference manual: paramlink.pdf
Package source: paramlink_0.9-6.tar.gz
OS X binary: paramlink_0.9-6.tgz
Windows binary: paramlink_0.9-6.zip
Old sources: paramlink archive

Reverse dependencies:

Reverse depends: Familias, IBDsim