pbatR: P2BAT

This package provides data analysis via the pbat program, and an alternative internal implementation of the power calculations via simulation only. For analysis, this package provides a frontend to the PBAT software, automatically reading in the output from the pbat program and displaying the corresponding figure when appropriate (i.e. PBAT-logrank). It includes support for multiple processes and clusters. For analysis, users must download PBAT (developed by Christoph Lange) and accept it's license, available on the PBAT webpage. Both the data analysis and power calculations have command line and graphical interfaces using tcltk.

Version: 2.2-9
Depends: R (≥ 2.0.0), survival, rootSolve
Imports: tcltk
Suggests: kinship2, tcltk
Published: 2013-03-30
Author: Thomas Hoffmann, with contributions from Christoph Lange
Maintainer: Thomas Hoffmann <tjhoffm at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL]
URL: http://sites.google.com/site/thomashoffmannproject/ http://www.biostat.harvard.edu/~clange/default.htm http://bioinformatics.oxfordjournals.org/cgi/content/short/22/24/3103
NeedsCompilation: yes
In views: Genetics
CRAN checks: pbatR results

Downloads:

Reference manual: pbatR.pdf
Package source: pbatR_2.2-9.tar.gz
OS X binary: pbatR_2.2-9.tgz
Windows binary: pbatR_2.2-9.zip
Old sources: pbatR archive

Reverse dependencies:

Reverse depends: fbati