pipeGS: Permutation p-Value Estimation for Gene Set Tests

Code for various permutation p-values estimation methods for gene set test. The description of corresponding methods can be found in the dissertation of Yu He(2016) "Efficient permutation P-value estimation for gene set tests" <https://searchworks.stanford.edu/view/11849351>. One of the methods also corresponds to the paper "Permutation p-value approximation via generalized Stolarsky invariance" <arXiv:1603.02757>.

Version: 0.2
Imports: parallel
Published: 2017-08-06
Author: Hera He
Maintainer: Hera He <njheyu at gmail.com>
License: GPL-2
URL: https://searchworks.stanford.edu/view/11849351, https://arxiv.org/abs/1603.02757
NeedsCompilation: no
CRAN checks: pipeGS results

Downloads:

Reference manual: pipeGS.pdf
Package source: pipeGS_0.2.tar.gz
Windows binaries: r-devel: pipeGS_0.2.zip, r-release: pipeGS_0.2.zip, r-oldrel: pipeGS_0.2.zip
OS X El Capitan binaries: r-release: pipeGS_0.2.tgz
OS X Mavericks binaries: r-oldrel: pipeGS_0.2.tgz
Old sources: pipeGS archive

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