poppr: Genetic Analysis of Populations with Mixed Reproduction

Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package.

Version: 2.1.1
Depends: R (≥ 2.15.1), adegenet (≥ 2.0.0)
Imports: stats, graphics, grDevices, utils, vegan, ggplot2, phangorn, ape (≥ 3.1-1), igraph, methods, ade4, pegas, reshape2, dplyr (≥ 0.4), boot, shiny
Suggests: testthat, knitr, rmarkdown, knitcitations, polysat, poweRlaw, cowplot
Published: 2016-03-15
Author: Zhian N. Kamvar [cre, aut], Javier F. Tabima [aut], Sydney E. Everhart [ctb, dtc], Jonah C. Brooks [aut], Stacy A. Krueger-Hadfield [ctb], Erik Sotka [ctb], Niklaus J. Grunwald [ths]
Maintainer: Zhian N. Kamvar <kamvarz at science.oregonstate.edu>
BugReports: https://github.com/grunwaldlab/poppr/issues
License: GPL-2 | GPL-3
URL: http://github.com/grunwaldlab/poppr, http://grunwaldlab.github.io/Population_Genetics_in_R/, http://grunwaldlab.cgrb.oregonstate.edu/poppr-r-package-population-genetics
NeedsCompilation: yes
Citation: poppr citation info
Materials: README NEWS
CRAN checks: poppr results


Reference manual: poppr.pdf
Vignettes: Multilocus Genotype Analysis
Algorightms and Equations
Migration from poppr version 1
Data import and manipulation
Package source: poppr_2.1.1.tar.gz
Windows binaries: r-devel: poppr_2.1.1.zip, r-release: poppr_2.1.1.zip, r-oldrel: poppr_2.1.1.zip
OS X Mavericks binaries: r-release: poppr_2.1.1.tgz, r-oldrel: poppr_2.1.1.tgz
Old sources: poppr archive

Reverse dependencies:

Reverse depends: popprxl
Reverse suggests: vcfR