poppr: Genetic Analysis of Populations with Mixed Reproduction

Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package.

Version: 1.1.5
Depends: R (≥ 2.15.1), adegenet (≥ 1.4-2)
Imports: vegan, ggplot2, phangorn, ape (≥ 3.1-1), igraph, methods, ade4, pegas, reshape2
Suggests: testthat, knitr, polysat
Published: 2015-05-13
Author: Zhian N. Kamvar [cre, aut], Javier F. Tabima [aut], Niklaus J. Grunwald [ths]
Maintainer: Zhian N. Kamvar <kamvarz at science.oregonstate.edu>
BugReports: https://github.com/grunwaldlab/poppr/issues
License: GPL-2 | GPL-3
URL: http://github.com/grunwaldlab/poppr, http://grunwaldlab.github.io/Population_Genetics_in_R/, http://grunwaldlab.cgrb.oregonstate.edu/poppr-r-package-population-genetics
NeedsCompilation: yes
Citation: poppr citation info
Materials: README NEWS
CRAN checks: poppr results

Downloads:

Reference manual: poppr.pdf
Vignettes: Algorightms and Equations
Data import and manipulation
Package source: poppr_1.1.5.tar.gz
Windows binaries: r-devel: poppr_1.1.5.zip, r-release: poppr_1.1.5.zip, r-oldrel: poppr_1.1.5.zip
OS X Snow Leopard binaries: r-oldrel: poppr_1.1.5.tgz
OS X Mavericks binaries: r-release: poppr_1.1.5.tgz
Old sources: poppr archive