primerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs

Identifies potential target sequences for a given set of primers and generates taxonomically annotated phylogenetic trees with the predicted amplification products.

Version: 1.0.3
Depends: R (≥ 3.0.0), directlabels, gridExtra
Imports: ggplot2, grid, XML, ape, httr, lubridate, plyr, scales, stringr, foreach
Published: 2016-01-12
Author: Jim Hester
Maintainer: Jim Hester <james.f.hester at>
License: GPL-2
NeedsCompilation: yes
CRAN checks: primerTree results


Reference manual: primerTree.pdf
Package source: primerTree_1.0.3.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Mavericks binaries: r-release: primerTree_1.0.3.tgz, r-oldrel: primerTree_1.0.3.tgz
Old sources: primerTree archive


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