primerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs

Identifies potential target sequences for a given set of primers and generates phylogenetic trees annotated with the taxonomies of the predicted amplification products.

Version: 1.0.4
Depends: R (≥ 3.0.0), directlabels, gridExtra
Imports: ggplot2, grid, XML, ape, httr, lubridate, plyr, scales, stringr, foreach, reshape2
Suggests: RCurl
Published: 2018-12-19
Author: Jim Hester
Maintainer: Jim Hester <james.f.hester at gmail.com>
License: GPL-2
NeedsCompilation: yes
CRAN checks: primerTree results

Downloads:

Reference manual: primerTree.pdf
Package source: primerTree_1.0.4.tar.gz
Windows binaries: r-devel: primerTree_1.0.4.zip, r-devel-gcc8: primerTree_1.0.4.zip, r-release: primerTree_1.0.4.zip, r-oldrel: primerTree_1.0.4.zip
OS X binaries: r-release: primerTree_1.0.4.tgz, r-oldrel: primerTree_1.0.4.tgz
Old sources: primerTree archive

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