protViz: Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics

This R package helps with quality checks, visualizations and analysis of mass spectrometry data, coming from proteomics experiments. The package is developed, tested and used at the Functional Genomics Center Zurich. We use this package mainly for prototyping, teaching, and having fun with proteomics data. But it can also be used to do solid data analysis for small scale data sets.

Version: 0.1.76
Depends: R (≥ 2.15.1), methods
Imports: Rcpp (≥ 0.9.9)
Suggests: lattice
Published: 2013-11-11
Author: Christian Panse, Jonas Grossmann, Simon Barkow-Oesterreicher
Maintainer: Christian Panse <cp at>
License: GPL-3
NeedsCompilation: yes
CRAN checks: protViz results


Reference manual: protViz.pdf
Vignettes: protViz primer
PTM MarkerFinder
Package source: protViz_0.1.76.tar.gz
OS X binary: protViz_0.1.76.tgz
Windows binary:
Old sources: protViz archive