qtlhot: Inference for QTL Hotspots

Functions to infer co-mapping trait hotspots and causal models. Chaibub Neto E, Keller MP, Broman AF, Attie AD, Jansen RC, Broman KW, Yandell BS (2012) Quantile-based permutation thresholds for QTL hotspots. Genetics 191 : 1355-1365. <doi:10.1534/genetics.112.139451>. Chaibub Neto E, Broman AT, Keller MP, Attie AD, Zhang B, Zhu J, Yandell BS (2013) Modeling causality for pairs of phenotypes in system genetics. Genetics 193 : 1003-1013. <doi:10.1534/genetics.112.147124>.

Version: 1.0.4
Depends: stats, qtl, mnormt, utils, corpcor, R (≥ 2.10)
Published: 2018-04-05
Author: Elias Chaibub Neto and Brian S Yandell
Maintainer: Brian S. Yandell <brian.yandell at wisc.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://www.stat.wisc.edu/~yandell/statgen
NeedsCompilation: yes
Materials: README
CRAN checks: qtlhot results

Downloads:

Reference manual: qtlhot.pdf
Vignettes: CMST Tutorial
Qtlhot Tutorial
Package source: qtlhot_1.0.4.tar.gz
Windows binaries: r-devel: qtlhot_1.0.4.zip, r-release: qtlhot_1.0.4.zip, r-oldrel: qtlhot_1.0.4.zip
OS X binaries: r-release: qtlhot_1.0.4.tgz, r-oldrel: qtlhot_1.0.4.tgz
Old sources: qtlhot archive

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