rexpokit: R wrappers for EXPOKIT; other matrix functions

This package wraps some of the matrix exponentiation utilities from EXPOKIT (http://www.maths.uq.edu.au/expokit/), a FORTRAN library that is widely recommended for matrix exponentiation (Sidje RB, 1998. "Expokit: A Software Package for Computing Matrix Exponentials." ACM Trans. Math. Softw. 24(1): 130-156). EXPOKIT includes functions for exponentiating both small, dense matrices, and large, sparse matrices (in sparse matrices, most of the cells have value 0). Rapid matrix exponentiation is useful in phylogenetics when we have a large number of states (as we do when we are inferring the history of transitions between the possible geographic ranges of a species), but is probably useful in other ways as well.

Version: 0.24.1
Depends: methods, SparseM, Rcpp (≥ 0.9.10)
LinkingTo: Rcpp
Published: 2013-07-15
Author: Nicholas J. Matzke [aut, cre, cph], Roger B. Sidje [aut, cph]
Maintainer: Nicholas J. Matzke <matzke at berkeley.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://phylo.wikidot.com/rexpokit
NeedsCompilation: yes
Citation: rexpokit citation info
Materials: NEWS
CRAN checks: rexpokit results

Downloads:

Reference manual: rexpokit.pdf
Package source: rexpokit_0.24.1.tar.gz
Windows binaries: r-devel: rexpokit_0.24.1.zip, r-release: rexpokit_0.24.1.zip, r-oldrel: rexpokit_0.24.1.zip
OS X Snow Leopard binaries: r-release: rexpokit_0.24.1.tgz, r-oldrel: rexpokit_0.24.1.tgz
OS X Mavericks binaries: r-release: rexpokit_0.24.1.tgz
Old sources: rexpokit archive

Reverse dependencies:

Reverse depends: BioGeoBEARS