rvHPDT: Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees

To detecting rare variants for binary traits using general pedigrees, the pedigree disequilibrium tests are proposed by collapsing rare haplotypes/variants with/without weights. To run the test, MERLIN is needed in Linux for haplotyping.

Version: 2.0
Depends: gregmisc, R (≥ 2.15.0)
Published: 2014-03-18
Author: Wei Guo
Maintainer: Wei Guo <wei.guo3 at nih.gov>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: rvHPDT results

Downloads:

Reference manual: rvHPDT.pdf
Package source: rvHPDT_2.0.tar.gz
OS X binary: rvHPDT_2.0.tgz
Windows binary: rvHPDT_2.0.zip
Old sources: rvHPDT archive