scalpel: Processes Calcium Imaging Data

Identifies the locations of neurons, and estimates their calcium concentrations over time using the SCALPEL method proposed in Petersen, A., Simon, N., and Witten, D. SCALPEL: Extracting Neurons from Calcium Imaging Data <https://ajpetecom.files.wordpress.com/2017/01/petersenscalpel.pdf>.

Version: 1.0.0
Imports: Matrix, R.matlab, protoclust, igraph, SDMTools, gam
Suggests: knitr, rmarkdown
Published: 2017-03-14
Author: Ashley Petersen
Maintainer: Ashley Petersen <ashleyjpete at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: www.ajpete.com/software
NeedsCompilation: no
CRAN checks: scalpel results

Downloads:

Reference manual: scalpel.pdf
Package source: scalpel_1.0.0.tar.gz
Windows binaries: r-devel: scalpel_1.0.0.zip, r-release: scalpel_1.0.0.zip, r-oldrel: scalpel_1.0.0.zip
OS X Mavericks binaries: r-release: scalpel_1.0.0.tgz, r-oldrel: scalpel_1.0.0.tgz

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