seqminer: Efficiently Read Sequence Data (VCF Format, BCF Format and METAL Format) into R

Integrate sequencing data (Variant call format, e.g. VCF or BCF) or meta-analysis results in R.

Version: 5.2
Suggests: testthat, SKAT
Published: 2016-05-03
Author: Xiaowei Zhan and Dajiang Liu, with contributions from Heng Li (Heng Li wrote tabix and with MIT license we include tabix source codes).
Maintainer: Xiaowei Zhan <zhanxw at>
License: GPL-2 | GPL-3 | file LICENSE [expanded from: GPL | file LICENSE]
Copyright: We have used the following software and made minimal necessary changes: Tabix, Heng Li <> (MIT license). We removed standard IO related functions, e.g. printf, fprintf ; also changed its un-safe pointer arithmetics.
NeedsCompilation: yes
SystemRequirements: zlib headers and libraries, optionally also bzip2 and POSIX-compliant regex functions.
Citation: seqminer citation info
Materials: README ChangeLog
CRAN checks: seqminer results


Reference manual: seqminer.pdf
Package source: seqminer_5.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Mavericks binaries: r-release: not available, r-oldrel: not available
Old sources: seqminer archive

Reverse dependencies:

Reverse suggests: FREGAT