sybil: sybil - Efficient Constrained Based Modelling in R

The package sybil is a Systems Biology Library for R, implementing algorithms for constraint based analyses of metabolic networks (e.g. flux-balance analysis (FBA), minimization of metabolic adjustment (MOMA), regulatory on/off minimization (ROOM), robustness analysis and flux variability analysis).

Version: 1.2.5
Depends: R (≥ 2.14.2), Matrix, lattice
Imports: methods
Suggests: glpkAPI (≥ 1.2.8), cplexAPI (≥ 1.2.4), clpAPI (≥ 1.2.4), lpSolveAPI (≥ 5.5.2.0), parallel, grid
Published: 2013-11-28
Author: Gabriel Gelius-Dietrich [aut, cre], C. Jonathan Fritzemeier [ctb], Rajen Piernikarczyk [ctb], Marc Andre Daxer [ctb], Benjamin Braasch [ctb], Abdelmoneim Desouki [ctb]
Maintainer: Gabriel Gelius-Dietrich <geliudie at uni-duesseldorf.de>
License: GPL-3
URL: http://www.cs.hhu.de/en/research-groups/bioinformatics/software/sybil.html
NeedsCompilation: no
Citation: sybil citation info
Materials: NEWS
CRAN checks: sybil results

Downloads:

Reference manual: sybil.pdf
Vignettes: sybil – Efficient Constrained Based Modelling in R
Package source: sybil_1.2.5.tar.gz
MacOS X binary: sybil_1.2.5.tgz
Windows binary: sybil_1.2.5.zip
Old sources: sybil archive

Reverse dependencies:

Reverse depends: RSeed, sybilccFBA, sybilcycleFreeFlux, sybilDynFBA, sybilEFBA, sybilSBML
Reverse suggests: abcdeFBA