synbreed: Framework for the Analysis of Genomic Prediction Data using R

A collection of functions required for genomic prediction which were developed within the Synbreed project for synergistic plant and animal breeding (<http://www.synbreed.tum.de>). This covers data processing, data visualization, and analysis. All functions are embedded within the framework of a single, unified data object. The implementation is flexible with respect to a wide range of data formats in plant and animal breeding. This research was funded by the German Federal Ministry of Education and Research (BMBF) within the AgroClustEr Synbreed - Synergistic plant and animal breeding (FKZ 0315528A).

Version: 0.11-41
Depends: R (≥ 2.14)
Imports: methods, doBy, igraph, lattice, MASS, LDheatmap, abind, BGLR, regress (≥ 1.3-8), parallel, doParallel, foreach
Suggests: synbreedData (≥ 1.5)
Published: 2016-10-13
Author: Valentin Wimmer, Hans-Juergen Auinger, Theresa Albrecht, Chris-Carolin Schoen with contributions by Larry Schaeffer, Malena Erbe, Ulrike Ober, Christian Reimer, Yvonne Badke and Peter VandeHaar
Maintainer: Hans-Juergen Auinger <auinger at tum.de>
License: GPL-3
URL: http://synbreed.r-forge.r-project.org/
NeedsCompilation: no
Citation: synbreed citation info
Materials: NEWS
CRAN checks: synbreed results

Downloads:

Reference manual: synbreed.pdf
Vignettes: Introduction to the synbreed package
Package source: synbreed_0.11-41.tar.gz
Windows binaries: r-devel: synbreed_0.11-41.zip, r-release: synbreed_0.11-41.zip, r-oldrel: synbreed_0.11-41.zip
OS X Mavericks binaries: r-release: synbreed_0.11-41.tgz, r-oldrel: synbreed_0.11-41.tgz
Old sources: synbreed archive

Reverse dependencies:

Reverse suggests: heritability

Linking:

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