ttScreening: Genome-wide DNA methylation sites screening by use of training and testing samples

This package utilizes training and testing samples to filter out uninformative DNA methylation sites. Surrogate variables (SVs) of DNA methylation are included in the filtering process to explain unknown factor effects.

Version: 1.5
Depends: sva, limma, matrixStats, corpcor, stats, MASS
Published: 2014-11-14
Author: Meredith Ray, Xin Tong, Hongmei Zhang
Maintainer: Meredith Ray <mere2110 at yahoo.com>
License: Artistic-2.0
NeedsCompilation: no
CRAN checks: ttScreening results

Downloads:

Reference manual: ttScreening.pdf
Package source: ttScreening_1.5.tar.gz
Windows binaries: r-devel: ttScreening_1.5.zip, r-release: ttScreening_1.5.zip, r-oldrel: ttScreening_1.5.zip
OS X Snow Leopard binaries: r-release: ttScreening_1.5.tgz, r-oldrel: ttScreening_1.5.tgz
OS X Mavericks binaries: r-release: ttScreening_1.5.tgz
Old sources: ttScreening archive