vqtl: Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance

In recognition that there are many factors (genetic loci, macro-genetic factors such as sex, and environmental factors) that influence the environmental variation, the 'vqtl' package conducts genome scans that accommodate and target these factors. The main functions of this package, scanonevar() and scanonevar.perm() take as input a cross object from the popular 'qtl' package.

Version: 1.0
Depends: R (≥ 2.14.0), dglm, evd, dplyr, qtl
Imports: RColorBrewer, gtools, stringr, plyr, scales, graphics, grDevices
Published: 2016-03-07
Author: Robert Corty
Maintainer: Robert Corty <rcorty at gmail.com>
License: GPL-3
NeedsCompilation: no
CRAN checks: vqtl results

Downloads:

Reference manual: vqtl.pdf
Package source: vqtl_1.0.tar.gz
Windows binaries: r-devel: vqtl_1.0.zip, r-release: vqtl_1.0.zip, r-oldrel: vqtl_1.0.zip
OS X Mavericks binaries: r-release: vqtl_1.0.tgz, r-oldrel: vqtl_1.0.tgz

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