CRAN Package Check Results for Package EMC

Last updated on 2018-12-17 13:49:39 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3 4.40 1.85 6.25 ERROR
r-devel-linux-x86_64-debian-gcc 1.3 3.62 1.79 5.41 ERROR
r-devel-linux-x86_64-fedora-clang 1.3 38.94 NOTE
r-devel-linux-x86_64-fedora-gcc 1.3 37.40 NOTE
r-devel-windows-ix86+x86_64 1.3 16.00 66.00 82.00 NOTE
r-patched-linux-x86_64 1.3 4.75 1.59 6.34 ERROR
r-patched-solaris-x86 1.3 56.70 NOTE
r-release-linux-x86_64 1.3 4.57 26.68 31.25 NOTE
r-release-windows-ix86+x86_64 1.3 12.00 47.00 59.00 NOTE
r-release-osx-x86_64 1.3 NOTE
r-oldrel-windows-ix86+x86_64 1.3 15.00 54.00 69.00 NOTE
r-oldrel-osx-x86_64 1.3 NOTE

Additional issues

rchk

Check Details

Version: 1.3
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.3
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘etc’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.3
Check: whether the package can be loaded
Result: ERROR
    Loading this package had a fatal error status code 1
    Loading log:
    Loading required package: mvtnorm
    Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
     unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
     /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
    Error: package ‘mvtnorm’ could not be loaded
    Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.3
Check: whether the package can be loaded
Result: ERROR
    Loading this package had a fatal error status code 1
    Loading log:
    Loading required package: mvtnorm
    Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
     unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
     /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
    Error: package ‘mvtnorm’ could not be loaded
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘MASS’ ‘mvtnorm’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.3
Check: R code for possible problems
Result: NOTE
    File ‘EMC/R/zzz.R’:
     .onLoad calls:
     packageStartupMessage("##\n", "## Evolutionary Monte Carlo Package (EMC)\n", "##\n", "## Functionality: random walk Metropolis, general Metropolis-Hastings\n", "## parallel tempering, target oriented EMC (TOEMC), temperature ladder\n", "## construction and placement\n", "##\n", "## Use: \"help(package = EMC)\" at the R prompt for more info\n", "##\n", "## Copyright (C) 2006-", this.year, " Gopi Goswami\n", "##\n", "## Created by: Gopi Goswami <goswami@stat.harvard.edu>\n", "## Maintained by: Gopi Goswami <grgoswami@gmail.com>\n", "##\n")
    
    See section ‘Good practice’ in '?.onAttach'.
    
    .placeTempers.do.1: no visible global function definition for ‘runif’
    ARHatIS: no visible global function definition for ‘var’
    CigarShapedFuncGenerator1 : logTarDensFunc: no visible global function
     definition for ‘dmvnorm’
    CigarShapedFuncGenerator1 : propNewFunc: no visible global function
     definition for ‘rnorm’
    CigarShapedFuncGenerator2 : logTarDensFunc: no visible global function
     definition for ‘dmvnorm’
    CigarShapedFuncGenerator2 : propNewFunc: no visible global function
     definition for ‘rt’
    CigarShapedFuncGenerator2 : logPropDensFunc: no visible global function
     definition for ‘dt’
    ISObj: no visible global function definition for ‘var’
    MCObj: no visible global function definition for ‘acf’
    VShapedFuncGenerator : logTarDensFunc : <anonymous>: no visible global
     function definition for ‘dmvnorm’
    VShapedFuncGenerator : MHPropNewFunc: no visible global function
     definition for ‘rnorm’
    WShapedFuncGenerator : logTarDensFunc : <anonymous>: no visible global
     function definition for ‘dmvnorm’
    WShapedFuncGenerator : MHPropNewFunc: no visible global function
     definition for ‘rnorm’
    buildLadder: no visible global function definition for ‘plot’
    buildLadder: no visible global function definition for ‘abline’
    threeDimNormalFuncGenerator : logTarDensFunc: no visible global
     function definition for ‘dmvnorm’
    threeDimNormalFuncGenerator : propNewFunc: no visible global function
     definition for ‘mvrnorm’
    threeDimNormalFuncGenerator : propNewFunc: no visible global function
     definition for ‘rnorm’
    twentyModeFuncGenerator: no visible global function definition for
     ‘read.table’
    twentyModeFuncGenerator : logTarDensFunc : <anonymous>: no visible
     global function definition for ‘dmvnorm’
    twentyModeFuncGenerator : MHPropNewFunc: no visible global function
     definition for ‘rnorm’
    uniModeFuncGenerator : logTarDensFunc: no visible global function
     definition for ‘dmvnorm’
    uniModeFuncGenerator : MHPropNewFunc: no visible global function
     definition for ‘rnorm’
    Undefined global functions or variables:
     abline acf dmvnorm dt mvrnorm plot read.table rnorm rt runif var
    Consider adding
     importFrom("graphics", "abline", "plot")
     importFrom("stats", "acf", "dt", "rnorm", "rt", "runif", "var")
     importFrom("utils", "read.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.3
Check: compiled code
Result: NOTE
    File ‘EMC/libs/EMC.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3
Check: whether the package can be loaded
Result: ERROR
    Loading this package had a fatal error status code 1
    Loading log:
    Loading required package: mvtnorm
    Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
     unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
     /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
    Error: package ‘mvtnorm’ could not be loaded
    Execution halted
Flavor: r-patched-linux-x86_64