CRAN Package Check Results for Package INDperform

Last updated on 2019-04-19 22:52:31 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.0 11.19 196.72 207.91 ERROR
r-devel-linux-x86_64-debian-gcc 0.2.0 12.15 147.49 159.64 ERROR
r-devel-linux-x86_64-fedora-clang 0.2.0 235.39 ERROR
r-devel-linux-x86_64-fedora-gcc 0.2.0 229.57 ERROR
r-devel-windows-ix86+x86_64 0.2.0 31.00 269.00 300.00 ERROR
r-patched-linux-x86_64 0.2.0 11.00 190.33 201.33 ERROR
r-patched-solaris-x86 0.2.0 319.60 ERROR
r-release-linux-x86_64 0.2.0 11.00 208.90 219.90 OK
r-release-windows-ix86+x86_64 0.2.0 13.00 216.00 229.00 OK
r-release-osx-x86_64 0.2.0 NOTE
r-oldrel-windows-ix86+x86_64 0.1.1 21.00 278.00 299.00 OK
r-oldrel-osx-x86_64 0.2.0 ERROR

Check Details

Version: 0.2.0
Check: tests
Result: ERROR
     Running 'testthat.R' [94s/100s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(INDperform)
     >
     > test_check("INDperform")
     -- 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     round(test5$prop, 1) not equal to 0.8.
     1/1 mismatches
     [1] 0.7 - 0.8 == -0.1
    
     variable required_data_type
     1 edf numeric
     # A tibble: 2 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     variable required_data_type
     1 a list
     2 b factor
     3 c character
     [1] 1 1 1 1 1 1 1 2
     [1] 2 2 4 2 2 2 2 2
     -- 2. Failure: test sample_boot (@test_cond_boot.R#69) ------------------------
     test1$considered[2] isn't true.
    
     -- 3. Failure: test sample_boot (@test_cond_boot.R#70) ------------------------
     all(test2$considered[c(3, 4, 6)]) isn't true.
    
     # A tibble: 12 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     3 5 rCC Tsum 3 3
     4 7 Cops Tsum 3 3
     5 9 Micro Tsum 3 3
     6 11 rZPPP Tsum 3 3
     7 13 Sprat Tsum 3 3
     8 15 Herring Tsum 3 3
     9 17 Stickle Tsum 3 3
     10 19 Cod Tsum 3 3
     11 21 SPF Tsum 3 3
     12 23 LPF Tsum 3 3
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 3 test_ind press 3 3
     variable required_data_type
     1 id integer
     # A tibble: 1 x 4
     id ind press error_message
     <int> <chr> <chr> <chr>
     1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[~
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando~
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 2 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
     2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 3 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
     2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
     3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 2 test press 3 3
     variable required_data_type
     1 id integer
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 6 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 2 test press gamm none "Error in mgcv::gamm(formula = form, d~
     2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d~
     3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d~
     4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d~
     5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d~
     6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d~
     # A tibble: 1 x 3
     ind_id ind error_message
     <int> <chr> <chr>
     1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +~
     variable required_data_type
     1 edf numeric
     variable required_data_type
     1 pred list
     press press_type
     1 Tsum add here
     2 Swin add here
     3 Pwin add here
     4 Nwin add here
     5 Fsprat add here
     6 Fher add here
     7 Fcod add here
     variable required_data_type
     1 edf numeric
     The conditions set in the crit_scores table for sub-criterion
     C9_1
     are not unique, i.e. conditions are met multiple times!
     Please correct your crit_score table before you continue. variable required_data_type
     1 edf numeric
     variable required_data_type
     1 r_sq numeric
     == testthat results ===========================================================
     OK: 630 SKIPPED: 0 FAILED: 3
     1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     2. Failure: test sample_boot (@test_cond_boot.R#69)
     3. Failure: test sample_boot (@test_cond_boot.R#70)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [68s/89s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(INDperform)
     >
     > test_check("INDperform")
     ── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     round(test5$prop, 1) not equal to 0.8.
     1/1 mismatches
     [1] 0.7 - 0.8 == -0.1
    
     variable required_data_type
     1 edf numeric
     # A tibble: 2 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     variable required_data_type
     1 a list
     2 b factor
     3 c character
     [1] 1 1 1 1 1 1 1 2
     [1] 2 2 4 2 2 2 2 2
     ── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
     test1$considered[2] isn't true.
    
     ── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
     all(test2$considered[c(3, 4, 6)]) isn't true.
    
     # A tibble: 12 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     3 5 rCC Tsum 3 3
     4 7 Cops Tsum 3 3
     5 9 Micro Tsum 3 3
     6 11 rZPPP Tsum 3 3
     7 13 Sprat Tsum 3 3
     8 15 Herring Tsum 3 3
     9 17 Stickle Tsum 3 3
     10 19 Cod Tsum 3 3
     11 21 SPF Tsum 3 3
     12 23 LPF Tsum 3 3
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 3 test_ind press 3 3
     variable required_data_type
     1 id integer
     # A tibble: 1 x 4
     id ind press error_message
     <int> <chr> <chr> <chr>
     1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 2 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 3 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
     3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 2 test press 3 3
     variable required_data_type
     1 id integer
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 6 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
     2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
     3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
     4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
     5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
     6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
     # A tibble: 1 x 3
     ind_id ind error_message
     <int> <chr> <chr>
     1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
     variable required_data_type
     1 edf numeric
     variable required_data_type
     1 pred list
     press press_type
     1 Tsum add here
     2 Swin add here
     3 Pwin add here
     4 Nwin add here
     5 Fsprat add here
     6 Fher add here
     7 Fcod add here
     variable required_data_type
     1 edf numeric
     The conditions set in the crit_scores table for sub-criterion
     C9_1
     are not unique, i.e. conditions are met multiple times!
     Please correct your crit_score table before you continue. variable required_data_type
     1 edf numeric
     variable required_data_type
     1 r_sq numeric
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 630 SKIPPED: 0 FAILED: 3
     1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     2. Failure: test sample_boot (@test_cond_boot.R#69)
     3. Failure: test sample_boot (@test_cond_boot.R#70)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘lazyeval’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [101s/110s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(INDperform)
     >
     > test_check("INDperform")
     ── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     round(test5$prop, 1) not equal to 0.8.
     1/1 mismatches
     [1] 0.7 - 0.8 == -0.1
    
     variable required_data_type
     1 edf numeric
     # A tibble: 2 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     variable required_data_type
     1 a list
     2 b factor
     3 c character
     [1] 1 1 1 1 1 1 1 2
     [1] 2 2 4 2 2 2 2 2
     ── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
     test1$considered[2] isn't true.
    
     ── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
     all(test2$considered[c(3, 4, 6)]) isn't true.
    
     # A tibble: 12 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     3 5 rCC Tsum 3 3
     4 7 Cops Tsum 3 3
     5 9 Micro Tsum 3 3
     6 11 rZPPP Tsum 3 3
     7 13 Sprat Tsum 3 3
     8 15 Herring Tsum 3 3
     9 17 Stickle Tsum 3 3
     10 19 Cod Tsum 3 3
     11 21 SPF Tsum 3 3
     12 23 LPF Tsum 3 3
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 3 test_ind press 3 3
     variable required_data_type
     1 id integer
     # A tibble: 1 x 4
     id ind press error_message
     <int> <chr> <chr> <chr>
     1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 2 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 3 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
     3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 2 test press 3 3
     variable required_data_type
     1 id integer
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 6 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
     2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
     3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
     4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
     5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
     6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
     # A tibble: 1 x 3
     ind_id ind error_message
     <int> <chr> <chr>
     1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
     variable required_data_type
     1 edf numeric
     variable required_data_type
     1 pred list
     press press_type
     1 Tsum add here
     2 Swin add here
     3 Pwin add here
     4 Nwin add here
     5 Fsprat add here
     6 Fher add here
     7 Fcod add here
     variable required_data_type
     1 edf numeric
     The conditions set in the crit_scores table for sub-criterion
     C9_1
     are not unique, i.e. conditions are met multiple times!
     Please correct your crit_score table before you continue. variable required_data_type
     1 edf numeric
     variable required_data_type
     1 r_sq numeric
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 630 SKIPPED: 0 FAILED: 3
     1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     2. Failure: test sample_boot (@test_cond_boot.R#69)
     3. Failure: test sample_boot (@test_cond_boot.R#70)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [99s/114s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(INDperform)
     >
     > test_check("INDperform")
     ── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     round(test5$prop, 1) not equal to 0.8.
     1/1 mismatches
     [1] 0.7 - 0.8 == -0.1
    
     variable required_data_type
     1 edf numeric
     # A tibble: 2 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     variable required_data_type
     1 a list
     2 b factor
     3 c character
     [1] 1 1 1 1 1 1 1 2
     [1] 2 2 4 2 2 2 2 2
     ── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
     test1$considered[2] isn't true.
    
     ── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
     all(test2$considered[c(3, 4, 6)]) isn't true.
    
     # A tibble: 12 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     3 5 rCC Tsum 3 3
     4 7 Cops Tsum 3 3
     5 9 Micro Tsum 3 3
     6 11 rZPPP Tsum 3 3
     7 13 Sprat Tsum 3 3
     8 15 Herring Tsum 3 3
     9 17 Stickle Tsum 3 3
     10 19 Cod Tsum 3 3
     11 21 SPF Tsum 3 3
     12 23 LPF Tsum 3 3
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 3 test_ind press 3 3
     variable required_data_type
     1 id integer
     # A tibble: 1 x 4
     id ind press error_message
     <int> <chr> <chr> <chr>
     1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 2 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 3 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
     3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 2 test press 3 3
     variable required_data_type
     1 id integer
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 6 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
     2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
     3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
     4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
     5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
     6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
     # A tibble: 1 x 3
     ind_id ind error_message
     <int> <chr> <chr>
     1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
     variable required_data_type
     1 edf numeric
     variable required_data_type
     1 pred list
     press press_type
     1 Tsum add here
     2 Swin add here
     3 Pwin add here
     4 Nwin add here
     5 Fsprat add here
     6 Fher add here
     7 Fcod add here
     variable required_data_type
     1 edf numeric
     The conditions set in the crit_scores table for sub-criterion
     C9_1
     are not unique, i.e. conditions are met multiple times!
     Please correct your crit_score table before you continue. variable required_data_type
     1 edf numeric
     variable required_data_type
     1 r_sq numeric
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 630 SKIPPED: 0 FAILED: 3
     1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     2. Failure: test sample_boot (@test_cond_boot.R#69)
     3. Failure: test sample_boot (@test_cond_boot.R#70)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.2.0
Check: tests
Result: ERROR
     Running 'testthat.R' [111s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(INDperform)
     >
     > test_check("INDperform")
     -- 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     round(test5$prop, 1) not equal to 0.8.
     1/1 mismatches
     [1] 0.7 - 0.8 == -0.1
    
     variable required_data_type
     1 edf numeric
     # A tibble: 2 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     variable required_data_type
     1 a list
     2 b factor
     3 c character
     [1] 1 1 1 1 1 1 1 2
     [1] 2 2 4 2 2 2 2 2
     -- 2. Failure: test sample_boot (@test_cond_boot.R#69) ------------------------
     test1$considered[2] isn't true.
    
     -- 3. Failure: test sample_boot (@test_cond_boot.R#70) ------------------------
     all(test2$considered[c(3, 4, 6)]) isn't true.
    
     # A tibble: 12 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     3 5 rCC Tsum 3 3
     4 7 Cops Tsum 3 3
     5 9 Micro Tsum 3 3
     6 11 rZPPP Tsum 3 3
     7 13 Sprat Tsum 3 3
     8 15 Herring Tsum 3 3
     9 17 Stickle Tsum 3 3
     10 19 Cod Tsum 3 3
     11 21 SPF Tsum 3 3
     12 23 LPF Tsum 3 3
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 3 test_ind press 3 3
     variable required_data_type
     1 id integer
     # A tibble: 1 x 4
     id ind press error_message
     <int> <chr> <chr> <chr>
     1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[~
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando~
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 2 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
     2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 3 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
     2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
     3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 2 test press 3 3
     variable required_data_type
     1 id integer
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 6 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 2 test press gamm none "Error in mgcv::gamm(formula = form, d~
     2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d~
     3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d~
     4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d~
     5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d~
     6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d~
     # A tibble: 1 x 3
     ind_id ind error_message
     <int> <chr> <chr>
     1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +~
     variable required_data_type
     1 edf numeric
     variable required_data_type
     1 pred list
     press press_type
     1 Tsum add here
     2 Swin add here
     3 Pwin add here
     4 Nwin add here
     5 Fsprat add here
     6 Fher add here
     7 Fcod add here
     variable required_data_type
     1 edf numeric
     The conditions set in the crit_scores table for sub-criterion
     C9_1
     are not unique, i.e. conditions are met multiple times!
     Please correct your crit_score table before you continue. variable required_data_type
     1 edf numeric
     variable required_data_type
     1 r_sq numeric
     == testthat results ===========================================================
     OK: 630 SKIPPED: 0 FAILED: 3
     1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     2. Failure: test sample_boot (@test_cond_boot.R#69)
     3. Failure: test sample_boot (@test_cond_boot.R#70)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [89s/95s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(INDperform)
     >
     > test_check("INDperform")
     ── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     round(test5$prop, 1) not equal to 0.8.
     1/1 mismatches
     [1] 0.7 - 0.8 == -0.1
    
     variable required_data_type
     1 edf numeric
     # A tibble: 2 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     variable required_data_type
     1 a list
     2 b factor
     3 c character
     [1] 1 1 1 1 1 1 1 2
     [1] 2 2 4 2 2 2 2 2
     ── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
     test1$considered[2] isn't true.
    
     ── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
     all(test2$considered[c(3, 4, 6)]) isn't true.
    
     # A tibble: 12 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     3 5 rCC Tsum 3 3
     4 7 Cops Tsum 3 3
     5 9 Micro Tsum 3 3
     6 11 rZPPP Tsum 3 3
     7 13 Sprat Tsum 3 3
     8 15 Herring Tsum 3 3
     9 17 Stickle Tsum 3 3
     10 19 Cod Tsum 3 3
     11 21 SPF Tsum 3 3
     12 23 LPF Tsum 3 3
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 3 test_ind press 3 3
     variable required_data_type
     1 id integer
     # A tibble: 1 x 4
     id ind press error_message
     <int> <chr> <chr> <chr>
     1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 2 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 3 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
     3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 2 test press 3 3
     variable required_data_type
     1 id integer
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 6 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
     2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
     3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
     4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
     5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
     6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
     # A tibble: 1 x 3
     ind_id ind error_message
     <int> <chr> <chr>
     1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
     variable required_data_type
     1 edf numeric
     variable required_data_type
     1 pred list
     press press_type
     1 Tsum add here
     2 Swin add here
     3 Pwin add here
     4 Nwin add here
     5 Fsprat add here
     6 Fher add here
     7 Fcod add here
     variable required_data_type
     1 edf numeric
     The conditions set in the crit_scores table for sub-criterion
     C9_1
     are not unique, i.e. conditions are met multiple times!
     Please correct your crit_score table before you continue. variable required_data_type
     1 edf numeric
     variable required_data_type
     1 r_sq numeric
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 630 SKIPPED: 0 FAILED: 3
     1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     2. Failure: test sample_boot (@test_cond_boot.R#69)
     3. Failure: test sample_boot (@test_cond_boot.R#70)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [135s/167s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(INDperform)
     >
     > test_check("INDperform")
     ── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     round(test5$prop, 1) not equal to 0.8.
     1/1 mismatches
     [1] 0.7 - 0.8 == -0.1
    
     variable required_data_type
     1 edf numeric
     # A tibble: 2 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     variable required_data_type
     1 a list
     2 b factor
     3 c character
     [1] 1 1 1 1 1 1 1 2
     [1] 2 2 4 2 2 2 2 2
     ── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
     test1$considered[2] isn't true.
    
     ── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
     all(test2$considered[c(3, 4, 6)]) isn't true.
    
     # A tibble: 12 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 1 TZA Tsum 3 3
     2 3 MS Tsum 3 3
     3 5 rCC Tsum 3 3
     4 7 Cops Tsum 3 3
     5 9 Micro Tsum 3 3
     6 11 rZPPP Tsum 3 3
     7 13 Sprat Tsum 3 3
     8 15 Herring Tsum 3 3
     9 17 Stickle Tsum 3 3
     10 19 Cod Tsum 3 3
     11 21 SPF Tsum 3 3
     12 23 LPF Tsum 3 3
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 3 test_ind press 3 3
     variable required_data_type
     1 id integer
     # A tibble: 1 x 4
     id ind press error_message
     <int> <chr> <chr> <chr>
     1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 1 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 2 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 3 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
     2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
     3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
     # A tibble: 1 x 5
     id ind press nr_test_timesteps NAs_in_ind_press
     <int> <chr> <chr> <int> <int>
     1 2 test press 3 3
     variable required_data_type
     1 id integer
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
    
     Maximum number of PQL iterations: 20
     # A tibble: 6 x 6
     id ind press model_type corrstruc error_message
     <int> <chr> <chr> <chr> <chr> <chr>
     1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
     2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
     3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
     4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
     5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
     6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
     # A tibble: 1 x 3
     ind_id ind error_message
     <int> <chr> <chr>
     1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
     variable required_data_type
     1 edf numeric
     variable required_data_type
     1 pred list
     press press_type
     1 Tsum add here
     2 Swin add here
     3 Pwin add here
     4 Nwin add here
     5 Fsprat add here
     6 Fher add here
     7 Fcod add here
     variable required_data_type
     1 edf numeric
     The conditions set in the crit_scores table for sub-criterion
     C9_1
     are not unique, i.e. conditions are met multiple times!
     Please correct your crit_score table before you continue. variable required_data_type
     1 edf numeric
     variable required_data_type
     1 r_sq numeric
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 630 SKIPPED: 0 FAILED: 3
     1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
     2. Failure: test sample_boot (@test_cond_boot.R#69)
     3. Failure: test sample_boot (@test_cond_boot.R#70)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 0.2.0
Check: package dependencies
Result: ERROR
    Package required and available but unsuitable version: ‘grDevices’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-osx-x86_64