CRAN Package Check Results for Package LDATS

Last updated on 2019-09-18 11:48:57 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.4 9.12 146.76 155.88 OK
r-devel-linux-x86_64-debian-gcc 0.2.4 8.01 108.48 116.49 OK
r-devel-linux-x86_64-fedora-clang 0.2.4 192.14 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.4 175.02 NOTE
r-devel-windows-ix86+x86_64 0.2.4 34.00 249.00 283.00 OK
r-patched-linux-x86_64 0.2.4 9.11 140.61 149.72 OK
r-patched-solaris-x86 0.2.4 263.80 WARN
r-release-linux-x86_64 0.2.4 8.24 144.33 152.57 OK
r-release-windows-ix86+x86_64 0.2.4 19.00 185.00 204.00 OK
r-release-osx-x86_64 0.2.4 WARN
r-oldrel-windows-ix86+x86_64 0.2.4 11.00 174.00 185.00 OK
r-oldrel-osx-x86_64 0.2.4 WARN

Check Details

Version: 0.2.4
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘dplyr’ ‘here’ ‘reshape’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.2.4
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘LDATS_codebase.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘LDATS_codebase.Rmd’
    
    --- re-building ‘paper-comparison.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/rodent_LDA_analysis.r'
    Content type 'text/plain; charset=utf-8' length 20378 bytes (19 KB)
    ==================================================
    downloaded 19 KB
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/rodent_data_for_LDA.r'
    Content type 'text/plain; charset=utf-8' length 2182 bytes
    ==================================================
    downloaded 2182 bytes
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/AIC_model_selection.R'
    Content type 'text/plain; charset=utf-8' length 3279 bytes
    ==================================================
    downloaded 3279 bytes
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/changepointmodel.r'
    Content type 'text/plain; charset=utf-8' length 11965 bytes (11 KB)
    ==================================================
    downloaded 11 KB
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/LDA-distance.R'
    Content type 'text/plain; charset=utf-8' length 3566 bytes
    ==================================================
    downloaded 3566 bytes
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/Rodent_table_dat.csv'
    Content type 'text/plain; charset=utf-8' length 19291 bytes (18 KB)
    ==================================================
    downloaded 18 KB
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/LDA_figure_scripts.R'
    Content type 'text/plain; charset=utf-8' length 11363 bytes (11 KB)
    ==================================================
    downloaded 11 KB
    
    trying URL 'https://raw.githubusercontent.com/weecology/PortalData/master/Rodents/moon_dates.csv'
    Content type 'text/plain; charset=utf-8' length 15169 bytes (14 KB)
    ==================================================
    downloaded 14 KB
    
    trying URL 'https://raw.githubusercontent.com/weecology/PortalData/master/Rodents/Portal_rodent_trapping.csv'
    Content type 'text/plain; charset=utf-8' length 273556 bytes (267 KB)
    ==================================================
    downloaded 267 KB
    
    Quitting from lines 169-187 (paper-comparison.Rmd)
    Error: processing vignette 'paper-comparison.Rmd' failed with diagnostics:
    object 'params' not found
    --- failed re-building ‘paper-comparison.Rmd’
    
    --- re-building ‘rodents-example.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘rodents-example.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘paper-comparison.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.2.4
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘LDATS_codebase.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘LDATS_codebase.Rmd’
    
    --- re-building ‘paper-comparison.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/rodent_LDA_analysis.r'
    Content type 'text/plain; charset=utf-8' length 20378 bytes (19 KB)
    ==================================================
    downloaded 19 KB
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/rodent_data_for_LDA.r'
    Content type 'text/plain; charset=utf-8' length 2182 bytes
    ==================================================
    downloaded 2182 bytes
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/AIC_model_selection.R'
    Content type 'text/plain; charset=utf-8' length 3279 bytes
    ==================================================
    downloaded 3279 bytes
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/changepointmodel.r'
    Content type 'text/plain; charset=utf-8' length 11965 bytes (11 KB)
    ==================================================
    downloaded 11 KB
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/LDA-distance.R'
    Content type 'text/plain; charset=utf-8' length 3566 bytes
    ==================================================
    downloaded 3566 bytes
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/Rodent_table_dat.csv'
    Content type 'text/plain; charset=utf-8' length 19291 bytes (18 KB)
    ==================================================
    downloaded 18 KB
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/LDA_figure_scripts.R'
    Content type 'text/plain; charset=utf-8' length 11363 bytes (11 KB)
    ==================================================
    downloaded 11 KB
    
    trying URL 'https://raw.githubusercontent.com/weecology/PortalData/master/Rodents/moon_dates.csv'
    Content type 'text/plain; charset=utf-8' length 15130 bytes (14 KB)
    ==================================================
    downloaded 14 KB
    
    trying URL 'https://raw.githubusercontent.com/weecology/PortalData/master/Rodents/Portal_rodent_trapping.csv'
    Content type 'text/plain; charset=utf-8' length 272470 bytes (266 KB)
    ==================================================
    downloaded 266 KB
    
    Quitting from lines 169-187 (paper-comparison.Rmd)
    Error: processing vignette 'paper-comparison.Rmd' failed with diagnostics:
    object 'params' not found
    --- failed re-building ‘paper-comparison.Rmd’
    
    --- re-building ‘rodents-example.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘rodents-example.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘paper-comparison.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.2.4
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/Rodent_table_dat.csv'
    Content type 'text/plain; charset=utf-8' length 19291 bytes (18 KB)
    ==================================================
    downloaded 18 KB
    
    trying URL 'https://raw.githubusercontent.com/emchristensen/Extreme-events-LDA/master/LDA_figure_scripts.R'
    Content type 'text/plain; charset=utf-8' length 11363 bytes (11 KB)
    ==================================================
    downloaded 11 KB
    
    trying URL 'https://raw.githubusercontent.com/weecology/PortalData/master/Rodents/moon_dates.csv'
    Content type 'text/plain; charset=utf-8' length 15130 bytes (14 KB)
    ==================================================
    downloaded 14 KB
    
    trying URL 'https://raw.githubusercontent.com/weecology/PortalData/master/Rodents/Portal_rodent_trapping.csv'
    Content type 'text/plain; charset=utf-8' length 272470 bytes (266 KB)
    ==================================================
    downloaded 266 KB
    
    Quitting from lines 169-187 (paper-comparison.Rmd)
    Error: processing vignette 'paper-comparison.Rmd' failed with diagnostics:
    object 'params' not found
    Execution halted
Flavor: r-oldrel-osx-x86_64